Dbfetch
ID LT906363; SV 1; linear; genomic DNA; STD; HUM; 3315 BP. XX AC LT906363; XX PR Project:PRJEB21509; XX DT 29-AUG-2018 (Rel. 137, Created) DT 29-AUG-2018 (Rel. 137, Last updated, Version 1) XX DE Homo sapiens HLA-A gene for MHC class I antigen, allele HLA-A*31:01:02:new XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RA Hayhurst D J.; RT ; RL Submitted (11-AUG-2017) to the INSDC. RL HLA Informatics Group, Anthony Nolan Research Institute, The Royal Free RL Hospital, Pond Street, London, NW3 2QG, United Kingdom XX DR MD5; 0c7f1547a6587f5076228d8f7b55c600. XX FH Key Location/Qualifiers FH FT source 1..3315 FT /organism="Homo sapiens" FT /mol_type="genomic DNA" FT /clone="AN00598" FT /db_xref="taxon:9606" FT CDS join(301..373,503..772,1014..1289,1890..2165,2265..2381, FT 2822..2854,2997..3044,3214..3218) FT /codon_start=1 FT /transl_table=1 FT /gene="HLA-A" FT /allele="HLA-A*31:01:02:new" FT /product="MHC class I antigen" FT /function="antigen presenting molecule" FT /db_xref="GOA:Q2MJJ6" FT /db_xref="InterPro:IPR001039" FT /db_xref="InterPro:IPR003006" FT /db_xref="InterPro:IPR003597" FT /db_xref="InterPro:IPR007110" FT /db_xref="InterPro:IPR010579" FT /db_xref="InterPro:IPR011161" FT /db_xref="InterPro:IPR011162" FT /db_xref="InterPro:IPR013783" FT /db_xref="InterPro:IPR036179" FT /db_xref="InterPro:IPR037055" FT /db_xref="UniProtKB/TrEMBL:Q2MJJ6" FT /protein_id="SNU78098.1" FT /translation="MAVMAPRTLLLLLLGALALTQTWAGSHSMRYFTTSVSRPGRGEPR FT FIAVGYVDDTQFVRFDSDAASQRMEPRAPWIEQERPEYWDQETRNVKAHSQIDRVDLGT FT LRGYYNQSEAGSHTIQMMYGCDVGSDGRFLRGYQQDAYDGKDYIALNEDLRSWTAADMA FT AQITQRKWEAARVAEQLRAYLEGTCVEWLRRYLENGKETLQRTDPPKTHMTHHAVSDHE FT ATLRCWALSFYPAEITLTWQRDGEDQTQDTELVETRPAGDGTFQKWASVVVPSGQEQRY FT TCHVQHEGLPKPLTLRWEPSSQPTIPIVGIIAGLVLFGAVFAGAVVAAVRWRRKSSDRK FT GGSYSQAASSDSAQGSDMSLTACKV" FT exon <301..373 FT /gene="HLA-A" FT /allele="HLA-A*31:01:02:new" FT /number=1 FT intron 374..502 FT /gene="HLA-A" FT /allele="HLA-A*31:01:02:new" FT /number=1 FT exon 503..772 FT /gene="HLA-A" FT /allele="HLA-A*31:01:02:new" FT /number=2 FT intron 773..1013 FT /gene="HLA-A" FT /allele="HLA-A*31:01:02:new" FT /number=2 FT exon 1014..1289 FT /gene="HLA-A" FT /allele="HLA-A*31:01:02:new" FT /number=3 FT intron 1290..1889 FT /gene="HLA-A" FT /allele="HLA-A*31:01:02:new" FT /number=3 FT exon 1890..2165 FT /gene="HLA-A" FT /allele="HLA-A*31:01:02:new" FT /number=4 FT intron 2166..2264 FT /gene="HLA-A" FT /allele="HLA-A*31:01:02:new" FT /number=4 FT exon 2265..2381 FT /gene="HLA-A" FT /allele="HLA-A*31:01:02:new" FT /number=5 FT intron 2382..2821 FT /gene="HLA-A" FT /allele="HLA-A*31:01:02:new" FT /number=5 FT exon 2822..2854 FT /gene="HLA-A" FT /allele="HLA-A*31:01:02:new" FT /number=6 FT intron 2855..2996 FT /gene="HLA-A" FT /allele="HLA-A*31:01:02:new" FT /number=6 FT exon 2997..3044 FT /gene="HLA-A" FT /allele="HLA-A*31:01:02:new" FT /number=7 FT intron 3045..3213 FT /gene="HLA-A" FT /allele="HLA-A*31:01:02:new" FT /number=7 FT exon 3214..>3218 FT /gene="HLA-A" FT /allele="HLA-A*31:01:02:new" FT /number=8 XX SQ Sequence 3315 BP; 636 A; 953 C; 1017 G; 709 T; 0 other; caggagcaga ggggtcaggg cgaagtacca gggccccagg cgtggctctc agggtctcag 60 gccccgaagg cggtgtatgg attggggagt cccagccttg gggattcccc aactccgcag 120 tttcttttct ccctctccca acctatgtag ggtccttctt cctggatact cacgacgcgg 180 acccagttct cactcccatt gggtgtcggg tttccagaga agccaatcag tgtcgtcgcg 240 gtcgcggttc taaagtccgc acgcacccac cgggactcag attctcccca gacgccgagg 300 atggccgtca tggcgccccg aaccctcctc ctgctactct tgggggccct ggccctgacc 360 cagacctggg cgggtgagtg cggggtcgtg gggaaaccgc ctctgcgggg agaagcaagg 420 ggcccgcccg gcgggggcgc aggacccggg tagccgcgcc gggaggaggg tcgggcggat 480 ctcagccact cctcgccccc aggctcccac tccatgaggt atttcaccac atccgtgtcc 540 cggcccggcc gcggggagcc ccgcttcatc gccgtgggct acgtggacga cacgcagttc 600 gtgcggttcg acagcgacgc cgcgagccag aggatggagc cgcgggcgcc gtggatagag 660 caggagaggc ctgagtattg ggaccaggag acacggaatg tgaaggccca ctcacagatt 720 gaccgagtgg acctggggac cctgcgcggc tactacaacc agagcgaggc cggtgagtga 780 ccccagcccg gggcgcaggt cacgacctct catcccccac ggacgggcca ggtcacccac 840 agtctccggg tccgagatcc accccgaagc cgcgggaccc cgagaccctt gccccgggag 900 aggcccaggc gcctttaccc ggtttcattt tcagtttagg ccaaaaatcc ccccgggttg 960 gtcggggccg gacggggctc gggggactgg gctgaccgtg gggtcggggc caggttctca 1020 caccatccag atgatgtatg gctgcgacgt ggggtcggac gggcgcttcc tccgcgggta 1080 ccagcaggac gcctacgacg gcaaggatta catcgccttg aacgaggacc tgcgctcttg 1140 gaccgcggcg gacatggcgg ctcagatcac ccagcgcaag tgggaggcgg cccgtgtggc 1200 ggagcagttg agagcctacc tggagggcac gtgcgtggag tggctccgca gatacctgga 1260 gaacgggaag gagacgctgc agcgcacggg taccaggggc cacggggcgc ctccctgatc 1320 gcctgtagat ctcccgggct ggcctcccac aaggagggga gacaactggg accaacacta 1380 gaatatcacc ctccctctgg tcctgaggga gaggaatcct cctgggtttc cagatcctgt 1440 accagagagt gactctgagg ttccgccctg ctctgtgaca caattaaggg ataaaatctc 1500 tgaaggaatg acgggaagac gatccctcga atactgatga gtggttccct ttgacacaca 1560 ccggcagcag ccttgggccc gtgacttttc ctctcaggcc ttgttctctg cttcacactc 1620 aatgtgtgtg ggggtctgag tccagcactt ctgagtccct cagcctccac tcaggtcagg 1680 accagaagtc gctgttccct cttcagggac tagaattttc cacggaatag gagattatcc 1740 caggtgcctg tgtccaggct ggtgtctggg ttctgtgctc ccttccccat cccaggtgtc 1800 ctgtccattc tcaagatagc cacatgtgtg ctggaggagt gtcccattac agatgcaaaa 1860 tgcctgaatg ttctgactct tcctgacaga cccccccaag acgcatatga ctcaccacgc 1920 tgtctctgac catgaggcca ccctgaggtg ctgggccctg agcttctacc ctgcggagat 1980 cacactgacc tggcagcggg atggggagga ccagacccag gacacggagc tcgtggagac 2040 caggcctgca ggggatggaa ccttccagaa gtgggcgtct gtggtggtgc cttctggaca 2100 ggagcagaga tacacctgcc atgtgcagca tgagggtctc cccaagcccc tcaccctgag 2160 atggggtaag gagggagatg ggggtgtcat gtcttttagg gaaagcagga gcctctctga 2220 cctttagcag ggtcagggcc cctcaccttc ccctcttttc ccagagccgt cttcccagcc 2280 caccatcccc atcgtgggca tcattgctgg cctagttctc tttggagctg tgttcgctgg 2340 agctgtggtc gctgctgtga ggtggaggag gaagagctca ggtggggtga aggggtgaag 2400 ggtgggtctg agatttcttg tctcactgag ggttccaaga cccaggtaga agtgtgccct 2460 gcctcgttac tgggaagcac catccacaat tatgggccta cccagcctgg gccctgtgtg 2520 ccagcactta ctcttttgta aagcacctgt taaaatgaag gacagattta tcaccttgat 2580 tatggcggtg atgggacctg atcccagcag tcacaagtca caggggaagg tccctgagga 2640 ccttcaggag ggcggttggt ccaggaccca cacctgcttt cttcatgttt cctgatcccg 2700 ccctgggtct gcagtcacac atttctggaa acttctctga ggtccaagac ttggaggttc 2760 ctctaggacc ttaaggccct ggctcctttc tggtatctca caggacattt tcttcccaca 2820 gatagaaaag gagggagcta ctctcaggct gcaagtaagt atgaaggagg atgatccaag 2880 aaatcactgg gatattgtgt ttgggagccc gtgggggagc tcacccaccc cacaattcct 2940 cctctagcca catcttctgt gggatctgac caggttctgt ttttgtccta ccccaggcag 3000 tgacagtgcc cagggctctg atatgtctct cacagcttgt aaaggtgaga gcctggaggg 3060 cctgatgtgt gttgggtgtt gggcggaaca gtggacgcag ctgtgctatg gggtttcttt 3120 gcattggatg tattgagcat gcgatgggct gtttaaagtg tgactcctca ctgtgacaga 3180 tacgaatttg ttcatgaata tttttttcta tagtgtgaga cagctgcctt gtgtgggact 3240 gagaggcaag atttgttcct gcccttccct ttgtgacttg aagtaccctg actttgtttc 3300 tgcaaaggca cctgc 3315 //