Dbfetch
ID LT838906; SV 1; linear; genomic DNA; STD; HUM; 3601 BP. XX AC LT838906; XX DT 12-APR-2017 (Rel. 132, Created) DT 12-APR-2017 (Rel. 132, Last updated, Version 1) XX DE Homo sapiens partial HLA-DRB1 gene for MHC class II antigen, allele DE HLA-DRB1*11 variant, exons 2-4 XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-3601 RA Colom S.; RT ; RL Submitted (07-APR-2017) to the INSDC. RL HLA Laboratory, EFS Rhone Alpes,, 29 av du maquis du gresivaudan, 38701, RL 38701, 38701, FRANCE. XX RN [2] RA Masson D., Colom S.; RT "x"; RL Unpublished. XX DR MD5; e9925aad1885f582d96bc3377d2a813a. XX FH Key Location/Qualifiers FH FT source 1..3601 FT /organism="Homo sapiens" FT /mol_type="genomic DNA" FT /db_xref="taxon:9606" FT CDS join(<1..270,2511..2792,3491..>3601) FT /codon_start=3 FT /transl_table=1 FT /gene="HLA-DRB1" FT /allele="HLA-DRB1*11 variant" FT /product="MHC class II antigen" FT /function="antigen presenting molecule" FT /db_xref="GOA:A0A1W2HC25" FT /db_xref="InterPro:IPR000353" FT /db_xref="InterPro:IPR003006" FT /db_xref="InterPro:IPR003597" FT /db_xref="InterPro:IPR007110" FT /db_xref="InterPro:IPR011162" FT /db_xref="InterPro:IPR013783" FT /db_xref="InterPro:IPR014745" FT /db_xref="InterPro:IPR036179" FT /db_xref="UniProtKB/TrEMBL:A0A1W2HC25" FT /protein_id="SMD50294.1" FT /translation="RFLEYSTSECHFFNGTERVRFLDRYFYNQEEYVRFDSDVGEFRAV FT TELGRPDEEYWNSQKDFLEDRRAAVDTYCRHNYGVGESFTVQRRVHPKVTVYPSKTQPL FT QHHNLLVCSVSGFYPGSIEVRWFRNGQEEKTGVVSTGLIHNGDWTFQTLVMLETVPRSG FT EVYTCQVEHPSVTSPLTVEWRARSESAQSKMLSGVGGFVLGLLFLGAGLFIYFRNQK" FT exon 1..270 FT /gene="HLA-DRB1" FT /allele="HLA-DRB1*11 variant" FT /number=2 FT intron 271..2510 FT /number=2 FT exon 2511..2792 FT /gene="HLA-DRB1" FT /allele="HLA-DRB1*11 variant" FT /number=3 FT intron 2793..3490 FT /number=3 FT exon 3491..3601 FT /gene="HLA-DRB1" FT /allele="HLA-DRB1*11 variant" FT /number=4 XX SQ Sequence 3601 BP; 898 A; 698 C; 882 G; 1123 T; 0 other; cacgtttctt ggagtactct acgtctgagt gtcatttctt caatgggacg gagcgggtgc 60 ggttcctgga cagatacttc tataaccaag aggagtacgt gcgcttcgac agcgacgtgg 120 gggagttccg ggcggtgacg gagctggggc ggcctgatga ggagtactgg aacagccaga 180 aggacttcct ggaagacagg cgggccgcgg tggacaccta ctgcagacac aactacgggg 240 ttggtgagag cttcacagtg cagcggcgag gtgagcgcgg cgcggggcgg ggcctgagtc 300 cctgtgagct gggaatctga gtgtgtgtgt gtgtgtgtgt gtgtgtgtgt gtgtgtgtgt 360 gtgtgagaga gagacagaga gacagagaga gagagagcgc catctgtgag catttagaat 420 cctctctatc ctgagcaagg agttctgagg gcacaggtgt gtgtgtagag tgtggatttg 480 tctgtgtctg tgaggctgtt gtgggagggg aggcaggagg gggctgcttc ttattcttgg 540 aggactctgt ggggaggtga caagggaggt gggtgcgggc ggctggagag agaggtgacc 600 ttgattgtct cgggtcctta gagatgcagg gaagggaaat gtaaggggtg tgtggttggg 660 gtgaaggttt aggggaggag agctgagggg taaggaaggt ttgggataat gtgaggaggc 720 cagttccaga ctgtccctgg cacacaccct tcatgtaatc tctgaaataa aagtgtgtgc 780 tgtttgtttg taaaagcatt agattaattt ctaggggaat tgaggagacc tctgaggcat 840 ctctgaagct tctttaggtc taaatttctt gctagttttt tgttttttat tgtgtatatt 900 tttacatagt agaaatgact gtgaaactaa ctttttgaat taaagtttta acacagttac 960 tattttatta taatgctaat agttttctag tagttacata ttattctttt atatataata 1020 gttgtgacac aacttacctc actttcccct ttgttgacct ttattatgac attcaccaaa 1080 atttgaaaat gtatgtttct ggttaatttt taatttatat ttttttcatt tataattctt 1140 ttgaattatt ttgacctatt tattggccag ttttaataac tgctgtaaga attccctatt 1200 gtatttggta gggaatggac aatgatctac tgcctaatat ctcgagggct tagtattttt 1260 ctcagtgact ttgtgggttc tttgtactgt gagattatta acactttatt gatatttgat 1320 tcagcatttg ctccagtttg tggtttgtat gttgattttg aaaattcttt tccatgttaa 1380 gaatttgaac atttttatat aataaaatat gttgcaaaat ttttattaat gatttacaat 1440 ccatcttaaa tctgccattt tgtggtattg ttgtctccag gtttctcctt acttctaaaa 1500 aaaattgcat ttattgagag tctgctagtg ttagggattt tcctgggcat aagcacccca 1560 agtgacgagt cccagacact gccttaatcc aaatgtgatt ctggaaagaa aaatcatttt 1620 acaatgatag gcctaataat aattaagctt gtgttgcatg ggagatgcat tgatcagcta 1680 aatgtaaata taagaacttt caaaactaaa atgacgttcc ttaatccttc tctctgcttt 1740 atgactcatg cttttctggg aaagtaaaaa tttggagaat catttctgtc tgtcccacct 1800 tcccaggggc agaaccattt ctgtggtgtt ctaaggtgtg agtgcatggc ggtagtattc 1860 ctaaaaattc atattcggtt tcgtcatgta cccaactctg tcccgttatc tatcaacatt 1920 gttttaaatc atatatttct gtcaaggtgt acaaggatga taaataggtg ccaagtggag 1980 cacccaagtg tgatgagccc cctcacagtg gaatggagtg tgaagcttta tgacctcata 2040 aattgaaggt tatcttcagt cattgtttta tatattttac atgcattaat cctcatataa 2100 tcccaagagg taaattagta taattatcct tcattatagg tgacaaagtt gagacacaga 2160 agaatcgaac tcttaaggca gaccttggat ttgaaccagg caacctggct cagatatcag 2220 ttttaattac tacactctgt actttcaaag atttgtaaac actttgacaa tgcatgacaa 2280 tttcaagcta tgaagaaaca aacacaattt ttcacaatat ctctcaaatc taataggtcc 2340 tcactatcaa gattaagttc caggctgatg acactgtaag gccacatggc cagctgtgct 2400 ggaggcctgg tcaaggtcag agcctgggtt tgcagagaag cagacaaaca gccaaacaag 2460 gagacttact ctgtcttcat gactcattcc ctctaccttt tttctcctag tccatcctaa 2520 ggtgactgtg tatccttcaa agacccagcc cctgcagcac cacaacctcc tggtctgttc 2580 tgtgagtggt ttctatccag gcagcattga agtcaggtgg ttccggaatg gccaggaaga 2640 gaagactggg gtggtatcca caggcctgat ccacaatgga gactggacct tccagaccct 2700 ggtgatgctg gaaacagttc ctcggagtgg agaggtttac acctgccaag tggagcaccc 2760 aagcgtgaca agccctctca cagtggaatg gagtgagcag ctttctgact tcataaattt 2820 ctcacccacc aagaagggga ctgtgctcat ccctgagtgt caggtttctc ctctccgaca 2880 tcctattttc atttgctcca tgttctcatc tccatcagca caggtcactg ggggtagccc 2940 tgtaggtgtt tctagaaaca cctgtacctc ctggagaagc agtctcgcct gccaggcagg 3000 agaggctgtc cctcttttga acctccccat gatgtcacag gtcagggtca cccaccctcc 3060 ccgggctcca ggcactgcct ctgggtctga gactgagttt ctggtgctgt tgatctgagt 3120 tatttgttgt gatctgggaa gaggagaagt gtaggggcct tcctgacatg aggggagtcc 3180 aatctcagct ctgcctttta ttagctctgt cactctagac aaactactta gcctcattga 3240 gtctcaggct ttctgtggat cagatgttga actcttgcct tacatcaagg ctgtaatatt 3300 tgaatgagtt tgatgtctga accttgtaac tgttcagtgt gatttgaaat cctttttttc 3360 tccagaaatg gctagttatt ttagttcttg tggggcagac ttcttcccca ttttcaaagc 3420 tctgaatctt agagtctcaa ttaaagaggt tcaatttgga ataaacacta aacctggctt 3480 cctctctcag gagcacggtc tgaatctgca cagagcaaga tgctgagtgg agtcgggggc 3540 tttgtgctgg gcctgctctt ccttggggcc gggctgttca tctacttcag gaatcagaaa 3600 g 3601 //