Dbfetch
ID LT618812; SV 1; linear; genomic DNA; STD; HUM; 3186 BP. XX AC LT618812; XX DT 10-OCT-2016 (Rel. 130, Created) DT 10-OCT-2016 (Rel. 130, Last updated, Version 1) XX DE Homo sapiens HLA-B gene for MHC class I antigen, allele HLA-B*35:42:01ext XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-3186 RA Voorter C.; RT ; RL Submitted (19-AUG-2016) to the INSDC. RL Transplantation Immunology, Maastricht University Medical Center, RL Transplantation Immunology, Tissue Typin, University Hospital Maastricht, P RL Debeylaan 25, 6202 AZ Maastricht, NETHERLANDS. XX RN [2] RA Groeneweg M., Matern B., Palusci F., Meertens C., Tilanus M.G.J., RA Voorter C.E.M.; RT "Group specific, unambiguous full-length gene HLA Class I typing by Sanger RT sequencing: a robust SSBT Strategy for typing and a golden reference for RT next generation sequencing approaches"; RL Unpublished. XX DR MD5; d924f873f42c94ef201af6e7f9cf972e. XX FH Key Location/Qualifiers FH FT source 1..3186 FT /organism="Homo sapiens" FT /chromosome="6" FT /isolate="21871" FT /mol_type="genomic DNA" FT /db_xref="taxon:9606" FT mRNA join(1..223,224..296,426..695,941..1216,1792..2067, FT 2172..2288,2730..2762,2869..2912,2913..3186) FT /gene="HLA-B" FT /allele="HLA-B*35:42:01ext" FT /product="MHC class I antigen" FT 5'UTR 1..223 FT /gene="HLA-B" FT /allele="HLA-B*35:42:01ext" FT /note="5'UTR" FT CDS join(224..296,426..695,941..1216,1792..2067,2172..2288, FT 2730..2762,2869..2912) FT /codon_start=1 FT /transl_table=1 FT /gene="HLA-B" FT /allele="HLA-B*35:42:01ext" FT /product="MHC class I antigen" FT /db_xref="GOA:S6FC68" FT /db_xref="InterPro:IPR001039" FT /db_xref="InterPro:IPR003006" FT /db_xref="InterPro:IPR003597" FT /db_xref="InterPro:IPR007110" FT /db_xref="InterPro:IPR010579" FT /db_xref="InterPro:IPR011161" FT /db_xref="InterPro:IPR011162" FT /db_xref="InterPro:IPR013783" FT /db_xref="InterPro:IPR036179" FT /db_xref="InterPro:IPR037055" FT /db_xref="UniProtKB/TrEMBL:S6FC68" FT /protein_id="SCQ83628.1" FT /translation="MRVTAPRTLLLLLWGAVALTETWAGSHSMRYFYTAMSRPGRGEPR FT FIAVGYVDDTQFVRFDSDAASPRTEPRAPWIEQEGPEYWDRNTQIFKTNTQTYRESLRN FT LRGYYNQSEAGSHIIQRMYGCDLGPDGRLLRGHDQSAYDGKDYIALNEDLSSWTAADTA FT AQITQRKWEAARVAEQLRAYLEGLCVEWLRRYLENGKETLQRADPPKTHVTHHPVSDHE FT ATLRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDRTFQKWAAVVVPSGEEQRY FT TCHVQHEGLPKPLTLRWEPSSQSTIPIVGIVAGLAVLAVVVIGAVVATVMCRRKSSGGK FT GGSYSQAASSDSAQGSDVSLTA" FT exon 224..296 FT /gene="HLA-B" FT /allele="HLA-B*35:42:01ext" FT /number=1 FT intron 297..425 FT /gene="HLA-B" FT /allele="HLA-B*35:42:01ext" FT /number=1 FT exon 426..695 FT /gene="HLA-B" FT /allele="HLA-B*35:42:01ext" FT /number=2 FT intron 696..940 FT /gene="HLA-B" FT /allele="HLA-B*35:42:01ext" FT /number=2 FT exon 941..1216 FT /gene="HLA-B" FT /allele="HLA-B*35:42:01ext" FT /number=3 FT intron 1217..1791 FT /gene="HLA-B" FT /allele="HLA-B*35:42:01ext" FT /number=3 FT exon 1792..2067 FT /gene="HLA-B" FT /allele="HLA-B*35:42:01ext" FT /number=4 FT intron 2068..2171 FT /gene="HLA-B" FT /allele="HLA-B*35:42:01ext" FT /number=4 FT exon 2172..2288 FT /gene="HLA-B" FT /allele="HLA-B*35:42:01ext" FT /number=5 FT intron 2289..2729 FT /gene="HLA-B" FT /allele="HLA-B*35:42:01ext" FT /number=5 FT exon 2730..2762 FT /gene="HLA-B" FT /allele="HLA-B*35:42:01ext" FT /number=6 FT intron 2763..2868 FT /gene="HLA-B" FT /allele="HLA-B*35:42:01ext" FT /number=6 FT exon 2869..2912 FT /gene="HLA-B" FT /allele="HLA-B*35:42:01ext" FT /number=7 FT 3'UTR 2913..3186 FT /gene="HLA-B" FT /allele="HLA-B*35:42:01ext" FT /note="3'UTR" XX SQ Sequence 3186 BP; 592 A; 928 C; 998 G; 668 T; 0 other; gtctgcattg gggaggcgca gcattgggga ttccccactc ccacgagttt cacttcttct 60 cccaacctat gtcgggtcct tcttccagga tactcgtgac gcgtccccat ttcccactcc 120 cattgggtgt cgggtgtcta gagaagccaa tcagtgtcgc cggggtccca gttctaaagt 180 ccccacgcac ccacccggac tcagaatctc ctcagacgcc gagatgcggg tcacggcgcc 240 ccgaaccctc ctcctgctgc tctggggggc agtggccctg accgagacct gggctggtga 300 gtgcggggtc ggcagggaaa tggcctctgt ggggaggagc gaggggaccg caggcggggg 360 cgcaggacct gaggagccgc gccgggagga gggtcgggcg ggtctcagcc cctcctcgcc 420 cccaggctcc cactccatga ggtatttcta caccgccatg tcccggcccg gccgcgggga 480 gccccgcttc atcgcagtgg gctacgtgga cgacacccag ttcgtgaggt tcgacagcga 540 cgccgcgagt ccgaggacgg agccccgggc gccatggata gagcaggagg ggccggagta 600 ttgggaccgg aacacacaga tcttcaagac caacacacag acttaccgag agagcctgcg 660 gaacctgcgc ggctactaca accagagcga ggccggtgag tgaccccggc ccggggcgca 720 ggtcacgact ccccatcccc cacgtacggc ccgggtcgcc ccgagtctcc gggtccgaga 780 tccgcctccc tgaggccgcg ggacccgccc agaccctcga ccggcgagag ccccaggcgc 840 gtttacccgg tttcattttc agttgaggcc aaaatccccg cgggttggtc ggggcggggc 900 ggggctcggg ggacggggct gaccgcgggg ccggggccag ggtctcacat catccagagg 960 atgtatggct gcgacctggg gcccgacggg cgcctcctcc gcgggcatga ccagtccgcc 1020 tacgacggca aggattacat cgccctgaac gaggacctga gctcctggac cgcggcggac 1080 accgcggctc agatcaccca gcgcaagtgg gaggcggccc gtgtggcgga gcagctgaga 1140 gcctacctgg agggcctgtg cgtggagtgg ctccgcagat acctggagaa cgggaaggag 1200 acgctgcagc gcgcgggtac caggggcagt ggggagcctt ccccatctcc tataggtcgc 1260 cggggatggc ctcccacgag aagaggagga aaatgggatc agcgctagaa tgtcgccctc 1320 ccttgaatgg agaatggcat gagttttcct gagtttcctc tgagggcccc ctcttctctc 1380 taggacaatt aagggatgac gtctctgagg aaatggaggg gaagacagtc cctagaatac 1440 tgatcagggg tcccctttga cccctgcagc agccttggga accgtgactt ttcctctcag 1500 gccttgttct ctgcctcaca ctcagtgtgt ttggggctct gattccagca cttctgagtc 1560 actttacctc cactcagatc aggagcagaa gtccctgttc cccgctcaga gactcgaact 1620 ttccaatgaa taggagatta tcccaggtgc ctgcgtccag gctggtgtct gggttctgtg 1680 ccccttcccc acaccaggtg tcctgtccat tctcaggctg gtcacatggg tggtcctagg 1740 gtgtcccatg agagatgcaa agcgcctgaa ttttctgact cttcccatca gaccccccaa 1800 agacacacgt gacccaccac cccgtctctg accatgaggc caccctgagg tgctgggccc 1860 tgggcttcta ccctgcggag atcacactga cctggcagcg ggatggcgag gaccaaactc 1920 aggacactga gcttgtggag accagaccag caggagatag aaccttccag aagtgggcag 1980 ctgtggtggt gccttctgga gaagagcaga gatacacatg ccatgtacag catgaggggc 2040 tgccgaagcc cctcaccctg agatggggta aggaggggga tgaggggtca tatctcttct 2100 cagggaaagc aggagccctt ctggagccct tcagcagggt cagggcccct cgtcttcccc 2160 tcctttccca gagccatctt cccagtccac catccccatc gtgggcattg ttgctggcct 2220 ggctgtccta gcagttgtgg tcatcggagc tgtggtcgct actgtgatgt gtaggaggaa 2280 gagctcaggt agggaagggg tgaggggtgg ggtctgggtt ttcttgtccc actgggggtt 2340 tcaagcccca ggtagaagtg ttccctgcct cattactggg aagcagcatc cacacagggg 2400 ctaacgcagc ctgggaccct gtgtgccagc acttactctt ttgtgcagca catgtgacaa 2460 tgaaggacgg atgtatcacc ttgatggttg tggtgttggg gtcctgattt cagcattcat 2520 gagtcagggg aaggtccctg ctaaggacag accttaggag ggcagttggt ccaggaccca 2580 cacttgcttt cctcgtgttt cctgatcctg ccttgggtct gtagtcatac ttctggaaat 2640 tccttttggg tccaagacga ggaggttcct ctaagatctc atggccctgc ttcctcccag 2700 tcccctcaca ggacattttc ttcccacagg tggaaaagga gggagctact ctcaggctgc 2760 gtgtaagtgg tgggggtggg agtgtggagg agctcaccca ccccataatt cctcctgtcc 2820 cacgtctcct gcgggctctg accaggtcct gtttttgttc tactccagcc agcgacagtg 2880 cccagggctc tgatgtgtct ctcacagctt gaaaaggtga gattcttggg gtctagagtg 2940 ggcggggggg gcggggaggg ggcagagggg aaaggcctgg gtaatggaga ttctttgatt 3000 gggatgtttc gcgtgtgtcg tgggctgttc agagtgtcat cacttaccat gactaaccag 3060 aatttgttca tgactgttgt tttctgtagc ctgagacagc tgtcttgtga gggactgaga 3120 tgcaggattt cttcactcct cccctttgtg acttcaagag cctctggcat ctctttctgc 3180 aaaggc 3186 //