Dbfetch
ID LT618811; SV 1; linear; genomic DNA; STD; HUM; 2901 BP. XX AC LT618811; XX DT 10-OCT-2016 (Rel. 130, Created) DT 10-OCT-2016 (Rel. 130, Last updated, Version 1) XX DE Homo sapiens HLA-B gene for MHC class I antigen, allele HLA-B*57:02:02 XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-2901 RA Voorter C.; RT ; RL Submitted (19-AUG-2016) to the INSDC. RL Transplantation Immunology, Maastricht University Medical Center, RL Transplantation Immunology, Tissue Typin, University Hospital Maastricht, P RL Debeylaan 25, 6202 AZ Maastricht, NETHERLANDS. XX RN [2] RA Groeneweg M., Matern B., Palusci F., Meertens C., Tilanus M.G.J., RA Voorter C.E.M.; RT "Group specific, unambiguous full-length gene HLA Class I typing by Sanger RT sequencing: a robust SSBT Strategy for typing and a golden reference for RT next generation sequencing approaches"; RL Unpublished. XX DR MD5; c6a66c8eaa293aeac708dd971c74e830. XX FH Key Location/Qualifiers FH FT source 1..2901 FT /organism="Homo sapiens" FT /chromosome="6" FT /isolate="32863" FT /mol_type="genomic DNA" FT /db_xref="taxon:9606" FT mRNA join(1..60,61..133,262..531,778..1053,1629..1904, FT 2009..2125,2567..2599,2706..2749,2750..2901) FT /gene="HLA-B" FT /allele="HLA-B*57:02:02" FT /product="MHC class I antigen" FT 5'UTR 1..60 FT /gene="HLA-B" FT /allele="HLA-B*57:02:02" FT /note="5'UTR" FT CDS join(61..133,262..531,778..1053,1629..1904,2009..2125, FT 2567..2599,2706..2749) FT /codon_start=1 FT /transl_table=1 FT /gene="HLA-B" FT /allele="HLA-B*57:02:02" FT /product="MHC class I antigen" FT /db_xref="GOA:A0A1G4HPV1" FT /db_xref="InterPro:IPR001039" FT /db_xref="InterPro:IPR003006" FT /db_xref="InterPro:IPR003597" FT /db_xref="InterPro:IPR007110" FT /db_xref="InterPro:IPR010579" FT /db_xref="InterPro:IPR011161" FT /db_xref="InterPro:IPR011162" FT /db_xref="InterPro:IPR013783" FT /db_xref="InterPro:IPR036179" FT /db_xref="InterPro:IPR037055" FT /db_xref="UniProtKB/TrEMBL:A0A1G4HPV1" FT /protein_id="SCQ83627.1" FT /translation="MRVTAPRTVLLLLWGAVALTETWAGSHSMRYFYTAMSRPGRGEPR FT FIAVGYVDDTQFVRFDSDAASPRMAPRAPWIEQEGPEYWDGETRNMKASAQTYRENLRI FT ALRYYNQSEAGSHIIQVMYGCDVGPDGRLLRGHNQYAYDGKDYIALNEDLSSWTAADTA FT AQITQRKWEAARVAEQRRAYLEGLCVEWLRRYLENGKETLQRADPPKTHVTHHPISDHE FT ATLRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDRTFQKWAAVVVPSGEEQRY FT TCHVQHEGLPKPLTLRWEPSSQSTVPIVGIVAGLAVLAVVVIGAVVAAVMCRRKSSGGK FT GGSYSQAACSDSAQGSDVSLTA" FT exon 61..133 FT /gene="HLA-B" FT /allele="HLA-B*57:02:02" FT /number=1 FT intron 134..261 FT /gene="HLA-B" FT /allele="HLA-B*57:02:02" FT /number=1 FT exon 262..531 FT /gene="HLA-B" FT /allele="HLA-B*57:02:02" FT /number=2 FT intron 532..777 FT /gene="HLA-B" FT /allele="HLA-B*57:02:02" FT /number=2 FT exon 778..1053 FT /gene="HLA-B" FT /allele="HLA-B*57:02:02" FT /number=3 FT intron 1054..1628 FT /gene="HLA-B" FT /allele="HLA-B*57:02:02" FT /number=3 FT exon 1629..1904 FT /gene="HLA-B" FT /allele="HLA-B*57:02:02" FT /number=4 FT intron 1905..2008 FT /gene="HLA-B" FT /allele="HLA-B*57:02:02" FT /number=4 FT exon 2009..2125 FT /gene="HLA-B" FT /allele="HLA-B*57:02:02" FT /number=5 FT intron 2126..2566 FT /gene="HLA-B" FT /allele="HLA-B*57:02:02" FT /number=5 FT exon 2567..2599 FT /gene="HLA-B" FT /allele="HLA-B*57:02:02" FT /number=6 FT intron 2600..2705 FT /gene="HLA-B" FT /allele="HLA-B*57:02:02" FT /number=6 FT exon 2706..2749 FT /gene="HLA-B" FT /allele="HLA-B*57:02:02" FT /number=7 FT 3'UTR 2750..2901 FT /gene="HLA-B" FT /allele="HLA-B*57:02:02" FT /note="3'UTR" XX SQ Sequence 2901 BP; 541 A; 843 C; 936 G; 581 T; 0 other; ggtcccagtt ctaaagtccc cacgcaccca cccggactca gaatctcctc agacgccgag 60 atgcgggtca cggcaccccg aaccgtcctc ctgctgctct ggggggcagt ggccctgacc 120 gagacctggg ccggtgagtg cgggtcggca gggaaatggc ctctgtaggg aggagcaagg 180 ggaccgcagg cgggggcgca ggacccgggg agccgcgccg ggaggagggt cgggcgggtc 240 tcagcccctc ctcgccccca ggctcccact ccatgaggta tttctacacc gccatgtccc 300 ggcccggccg cggggagccc cgcttcatcg cagtgggcta cgtggacgac acccagttcg 360 tgaggttcga cagcgacgcc gcgagtccga ggatggcgcc ccgggcgcca tggatagagc 420 aggaggggcc ggagtattgg gacggggaga cacggaacat gaaggcctcc gcgcagactt 480 accgagagaa cctgcggatc gcgctccgct actacaacca gagcgaagcc ggtgagtgac 540 cccggcccgg ggcgcaggtc acgactcccc atcccccacg tacggcccgg gtcgccccga 600 gtctccgggt ccgagatcca cccccctgag gccgcgggac ccgcccagac cctcgaccgg 660 cgagagcccc aggcgcgttt acccggtttc attttcagtt gaggccaaaa tccccgcggg 720 ttggtcaggg cggggcgggg ctcgggggga cggggctgac cgcggggccg gggccagggt 780 ctcacatcat ccaggtgatg tatggctgcg acgtggggcc ggacgggcgc ctcctccgcg 840 ggcataacca gtacgcctac gacggcaagg attacatcgc cctgaacgag gacctgagct 900 cctggaccgc ggcggacacg gcggctcaga tcacccagcg caagtgggag gcggcccgtg 960 tggcggagca gcggagagcc tacctggagg gcctgtgcgt ggagtggctc cgcagatacc 1020 tggagaacgg gaaggagacg ctgcagcgcg cgggtaccag gggcagtggg gagccttccc 1080 catctcctat aggtcgccgg ggatggcctc ccacgagaag aggaggaaaa tgggatcagc 1140 gctagaatgt cgccctccct tgaatggaga atggcatgag ttttcctgag tttcctctga 1200 gggccccctc ttctctctag gacaattaag ggatgacgtc tctgaggaaa tggaggggaa 1260 gacagtccct agaatactga tcaggggtcc cctttgaccc ctgcagcagc cttgggaacc 1320 gtgacttttc ctctcaggcc ttgttctctg cctcacactc agtgtgtttg gggctctgat 1380 tccagcactt ctgagtcact ttacctccac tcagatcagg agcagaagtc cctgttcccc 1440 gctcagagac tcgaactttc caatgaatag gagattatcc caggtgcctg cgtccaggct 1500 ggtgtctggg ttctgtgccc cttccccacc ccaggtgtcc tgcccattct caggctggtc 1560 acatgggtgg tcctagggtg tcccatgaga gatgcaaagc gcctgaattt tctgactctt 1620 cccatcagac cccccaaaga cacatgtgac ccaccacccc atctctgacc atgaggccac 1680 cctgaggtgc tgggccctgg gcttctaccc tgcggagatc acactgacct ggcagcggga 1740 tggcgaggac caaactcagg acaccgagct tgtggagacc agaccagcag gagatagaac 1800 cttccagaag tgggcagctg tggtggtgcc ttctggagaa gagcagagat acacatgcca 1860 tgtacagcat gaggggctgc caaagcccct caccctgaga tggggtaagg agggggatga 1920 ggggtcatat ctcttctcag ggaaagcagg agcccttctg gagcccttca gcagggtcag 1980 ggcccctcat cttcccctcc tttcccagag ccatcttccc aatccaccgt ccccatcgtg 2040 ggcattgttg ctggcctggc tgtcctagca gttgtggtca tcggagctgt ggtcgctgct 2100 gtgatgtgta ggaggaagag ctcaggtagg gaaggggtga ggggtggggt ctgggttttc 2160 ttgtcccact gggggtttca agccccaggt agaagtgttc cctgcctcat tactgggaag 2220 cagcatgcac acaggggcta acgcagcctg ggaccctgtg tgccagcact tactcttttg 2280 tgcagcacat gtgacaatga aggacggatg tatcaccttg atggttgtgg tgttggggtc 2340 ctgattccag cattcatgag tcaggggaag gtccctgcta aggacagacc ttaggagagc 2400 agttggtcca ggacccacac ttgctttcct cgtgtttcct gatcctgccc tgggtctgta 2460 gtcatacttc tggaaattcc ttttgggtcc aagacgagga ggttcctcta agatctcatg 2520 gccctgcttc ctcccagtcc cctcacagga cattttcttc ccacaggtgg aaaaggaggg 2580 agctactctc aggctgcgtg taagtggtgg gggtgggagt gtggaggagc tcacccaccc 2640 cataattcct cctgtcccac gtctcctgcg ggctctgacc aggtcctgtt tttgttctac 2700 tccaggcagc gacagtgccc agggctctga tgtgtctctc acagcttgaa aaggtgagat 2760 tcttggggtc tagagtgggt gggggtggcg ggtctggggc ggggtggggc agaggggaaa 2820 ggcctgggta atggagattc tttgattggg atgtttcgcg tgtgtggtgg gctgttcaga 2880 gtgtcatcac ttaccatgac t 2901 //