Dbfetch
ID LT618806; SV 1; linear; genomic DNA; STD; HUM; 2928 BP. XX AC LT618806; XX DT 10-OCT-2016 (Rel. 130, Created) DT 10-OCT-2016 (Rel. 130, Last updated, Version 1) XX DE Homo sapiens HLA-B gene for MHC class I antigen, allele HLA-B*07:129ext, DE isolate 44913 XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-2928 RA Voorter C.; RT ; RL Submitted (19-AUG-2016) to the INSDC. RL Transplantation Immunology, Maastricht University Medical Center, RL Transplantation Immunology, Tissue Typin, University Hospital Maastricht, P RL Debeylaan 25, 6202 AZ Maastricht, NETHERLANDS. XX RN [2] RA Groeneweg M., Matern B., Palusci F., Meertens C., Tilanus M.G.J., RA Voorter C.E.M.; RT "Group specific, unambiguous full-length gene HLA Class I typing by Sanger RT sequencing: a robust SSBT Strategy for typing and a golden reference for RT next generation sequencing approaches"; RL Unpublished. XX DR MD5; 184d6197d38a058550162520f3236623. XX FH Key Location/Qualifiers FH FT source 1..2928 FT /organism="Homo sapiens" FT /chromosome="6" FT /isolate="44913" FT /mol_type="genomic DNA" FT /db_xref="taxon:9606" FT mRNA join(1..114,115..187,316..585,831..1106,1681..1956, FT 2050..2166,2608..2640,2747..2790,2791..2928) FT /gene="HLA-B" FT /allele="HLA-B*07:129ext" FT /product="MHC class I antigen" FT 5'UTR 1..114 FT /gene="HLA-B" FT /allele="HLA-B*07:129ext" FT /note="5'UTR" FT CDS join(115..187,316..585,831..1106,1681..1956,2050..2166, FT 2608..2640,2747..2790) FT /codon_start=1 FT /transl_table=1 FT /gene="HLA-B" FT /allele="HLA-B*07:129ext" FT /product="MHC class I antigen" FT /db_xref="GOA:A0A1G4HPU1" FT /db_xref="InterPro:IPR001039" FT /db_xref="InterPro:IPR003006" FT /db_xref="InterPro:IPR003597" FT /db_xref="InterPro:IPR007110" FT /db_xref="InterPro:IPR010579" FT /db_xref="InterPro:IPR011161" FT /db_xref="InterPro:IPR011162" FT /db_xref="InterPro:IPR013783" FT /db_xref="InterPro:IPR036179" FT /db_xref="InterPro:IPR037055" FT /db_xref="UniProtKB/TrEMBL:A0A1G4HPU1" FT /protein_id="SCQ83622.1" FT /translation="MLVMAPRTVLLLLSAALALTETWAGSHSMRYFYTSVSRPGRGEPR FT FISVGYVDDTQFVRFDSDAASPREEPRAPWIEQEGPEYWDRNTQIYKAQAQTDRESLRN FT LRGYYNQSEAGSHTLQSMYGCDVGPDGRLLRGHDQYAYDGKDYIALNEDLRSWTAADTA FT AQITQRKWEAAREAEQRRAYLEGECVEWLRRYLENGKDKLERADPPKTHVTHHPISDHE FT ASLRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDRTFQKWAAVVVPSGEEQRY FT TCHVQHEGLPKPLTLRWEPSSQSTVPIVGIVAGLAVLAVVVIGAVVAAVMCRRKSSGGK FT GGSYSQAACSDSAQGSDVSLTA" FT exon 115..187 FT /gene="HLA-B" FT /allele="HLA-B*07:129ext" FT /number=1 FT intron 188..315 FT /gene="HLA-B" FT /allele="HLA-B*07:129ext" FT /number=1 FT exon 316..585 FT /gene="HLA-B" FT /allele="HLA-B*07:129ext" FT /number=2 FT intron 586..830 FT /gene="HLA-B" FT /allele="HLA-B*07:129ext" FT /number=2 FT exon 831..1106 FT /gene="HLA-B" FT /allele="HLA-B*07:129ext" FT /number=3 FT intron 1107..1680 FT /gene="HLA-B" FT /allele="HLA-B*07:129ext" FT /number=3 FT exon 1681..1956 FT /gene="HLA-B" FT /allele="HLA-B*07:129ext" FT /number=4 FT intron 1957..2049 FT /gene="HLA-B" FT /allele="HLA-B*07:129ext" FT /number=4 FT exon 2050..2166 FT /gene="HLA-B" FT /allele="HLA-B*07:129ext" FT /number=5 FT intron 2167..2607 FT /gene="HLA-B" FT /allele="HLA-B*07:129ext" FT /number=5 FT exon 2608..2640 FT /gene="HLA-B" FT /allele="HLA-B*07:129ext" FT /number=6 FT intron 2641..2746 FT /gene="HLA-B" FT /allele="HLA-B*07:129ext" FT /number=6 FT exon 2747..2790 FT /gene="HLA-B" FT /allele="HLA-B*07:129ext" FT /number=7 FT 3'UTR 2791..2928 FT /gene="HLA-B" FT /allele="HLA-B*07:129ext" FT /note="3'UTR" XX SQ Sequence 2928 BP; 543 A; 848 C; 944 G; 593 T; 0 other; ttccccactc ccattgggta ttggatatct agagaagcca atcagcgtcg ccgcggtccc 60 agttctaaag tccccacgca cccacccgga ctcagagtct cctcagacgc cgagatgctg 120 gtcatggcgc cccgaaccgt cctcctgctg ctctcggcgg ccctggccct gaccgagacc 180 tgggccggtg agtgcgggtc gggagggaaa tggcctctgc cgggaggagc gaggggaccg 240 caggcggggg cgcaggacct gaggagccgc gccgggagga gggtcgggcg ggtctcagcc 300 cctcctcacc cccaggctcc cactccatga ggtatttcta cacctccgtg tcccggcccg 360 gccgcgggga gccccgcttc atctcagtgg gctacgtgga cgacacccag ttcgtgaggt 420 tcgacagcga cgccgcgagt ccgagagagg agccgcgggc gccgtggata gagcaggagg 480 ggccggagta ttgggaccgg aacacacaga tctacaaggc ccaggcacag actgaccgag 540 agagcctgcg gaacctgcgc ggctactaca accagagcga ggccggtgag tgaccccggc 600 ccggggcgca ggtcacgact ccccatcccc cacgtacggc ccgggtcgcc ccgagtctcc 660 gggtccgaga tccgcctccc tgaggccgcg ggacccgccc agaccctcga ccggcgagag 720 ccccaggcgc gtttacccgg tttcattttc agttgaggcc aaaatccccg cgggttggtc 780 ggggcggggc ggggctcggg ggactgggct gaccgcgggg ccggggccag ggtctcacac 840 cctccagagc atgtacggct gcgacgtggg gccggacggg cgcctcctcc gcgggcatga 900 ccagtacgcc tacgacggca aggattacat cgccctgaac gaggacctgc gctcctggac 960 cgccgcggac acggcggctc agatcaccca gcgcaagtgg gaggcggccc gtgaggcgga 1020 gcagcggaga gcctacctgg agggcgagtg cgtggagtgg ctccgcagat acctggagaa 1080 cgggaaggac aagctggagc gcgctggtac caggggcagt ggggagcctt ccccatctcc 1140 tataggtcgc cggggatggc ctcccacgag aagaggagga aaatgggatc agcgctagaa 1200 tgtcgccctc cgttgaatgg agaatggcat gagttttcct gagtttcctc tgagggcccc 1260 ctcttctctc tagacaatta aggaatgacg tctctgagga aatggagggg aagacagtcc 1320 ctagaatact gatcaggggt cccctttgac ccctgcagca gccttgggaa ccgtgacttt 1380 tcctctcagg ccttgttctc tgcctcacac tcagtgtgtt tggggctctg attccagcac 1440 ttctgagtca ctttacctcc actcagatca ggagcagaag tccctgttcc ccgctcagag 1500 actcgaactt tccaatgaat aggagattat cccaggtgcc tgcgtccagg ctggtgtctg 1560 ggttctgtgc cccttcccca ccccaggtgt cctgtccatt ctcaggctgg tcacatgggt 1620 ggtcctaggg tgtcccatga aagatgcaaa gcgcctgaat tttctgactc ttcccatcag 1680 accccccaaa gacacacgtg acccaccacc ccatctctga ccatgaggcc agcctgaggt 1740 gctgggccct gggtttctac cctgcggaga tcacactgac ctggcagcgg gatggcgagg 1800 accaaactca ggacactgag cttgtggaga ccagaccagc aggagataga accttccaga 1860 agtgggcagc tgtggtggtg ccttctggag aagagcagag atacacatgc catgtacagc 1920 atgaggggct gccgaagccc ctcaccctga gatggggtaa ggagggggat gaggggtcat 1980 atctcttctc agggaaagca ggagcccttc agcagggtca gggcccctca tcttcccctc 2040 ctttcccaga gccgtcttcc cagtccaccg tccccatcgt gggcattgtt gctggcctgg 2100 ctgtcctagc agttgtggtc atcggagctg tggtcgctgc tgtgatgtgt aggaggaaga 2160 gttcaggtag ggaaggggtg aggggtgggg tctgggtttt cttgtcccac tgggggtttc 2220 aagccccagg tagaagtgtt ccctgcctca ttactgggaa gcagcatgca cacaggggct 2280 aacgcagcct gggaccctgt gtgccagcac ttactctttt gtgcagcaca tgtgacaatg 2340 aaggatggat gtatcacctt gatggttgtg gtgttggggt cctgattcca gcattcatga 2400 gtcaggggaa ggtccctgct aaggacagac cttaggaggg cagttggtcc aggacccaca 2460 cttgctttcc tcgtgtttcc tgatcctgcc ctgggtctgt agtcatactt ctggaaattc 2520 cttttgggtc caagactagg aggttcctct aagatctcat ggccctgctt cctcccagtg 2580 ccctcacagg acattttctt cccacaggtg gaaaaggagg gagctactct caggctgcgt 2640 gtaagtggtg ggggtgggag tgtggaggag ctcacccacc ccataattcc tcctgtccca 2700 cgtctcctgc gggctctgac caggtcctgt ttttgttcta ctccaggcag cgacagtgcc 2760 cagggctctg atgtgtctct cacagcttga aaaggtgaga ttcttggggt ctagagtggg 2820 tggggtggcg ggtctggggg tgggtggggc agaggggaaa ggcctgggta atggggattc 2880 tttgattggg atgtttcgcg tgtgtggtgg gctgtttaga gtgtcatc 2928 //