Dbfetch
ID LT618796; SV 1; linear; genomic DNA; STD; HUM; 3245 BP. XX AC LT618796; XX DT 10-OCT-2016 (Rel. 130, Created) DT 10-OCT-2016 (Rel. 130, Last updated, Version 1) XX DE Homo sapiens HLA-E gene for MHC class I antigen, allele DE HLA-E*01:03:01:01new XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-3245 RA Voorter C.; RT ; RL Submitted (08-AUG-2016) to the INSDC. RL Transplantation Immunology, Maastricht University Medical Center, RL Transplantation Immunology, Tissue Typin, University Hospital Maastricht, P RL Debeylaan 25, 6202 AZ Maastricht, NETHERLANDS. XX RN [2] RA Olieslagers T.I., Voorter C.E.M., Groeneweg M., Xu Y., Wieten L., RA Tilanus M.G.J.; RT "New insights in HLA-E polymorphism by refined analysis of the full length RT gene"; RL Unpublished. XX DR MD5; f69dcf7deadb399c8b8740850f43beb5. DR Ensembl-Gn; ENSG00000204592; homo_sapiens. DR Ensembl-Gn; ENSG00000206493; homo_sapiens. DR Ensembl-Gn; ENSG00000225201; homo_sapiens. DR Ensembl-Gn; ENSG00000229252; homo_sapiens. DR Ensembl-Gn; ENSG00000230254; homo_sapiens. DR Ensembl-Gn; ENSG00000233904; homo_sapiens. DR Ensembl-Gn; ENSG00000236632; homo_sapiens. DR Ensembl-Tr; ENST00000376630; homo_sapiens. DR Ensembl-Tr; ENST00000383597; homo_sapiens. DR Ensembl-Tr; ENST00000415289; homo_sapiens. DR Ensembl-Tr; ENST00000415649; homo_sapiens. DR Ensembl-Tr; ENST00000425603; homo_sapiens. DR Ensembl-Tr; ENST00000427936; homo_sapiens. DR Ensembl-Tr; ENST00000444683; homo_sapiens. DR IMGT/HLA; HLA-E*01:03:01:04; HLA16324. XX FH Key Location/Qualifiers FH FT source 1..3245 FT /organism="Homo sapiens" FT /chromosome="6" FT /isolate="43454" FT /mol_type="genomic DNA" FT /db_xref="taxon:9606" FT mRNA join(1..28,29..92,223..492,737..1012,1634..1909,2034..2150, FT 2901..2933,3038..3078,3079..3245) FT /gene="HLA-E" FT /allele="HLA-E*01:03:01:01new" FT /product="MHC class I antigen" FT 5'UTR 1..28 FT /gene="HLA-E" FT /allele="HLA-E*01:03:01:01new" FT /note="5'UTR" FT CDS join(29..92,223..492,737..1012,1634..1909,2034..2150, FT 2901..2933,3038..3078) FT /codon_start=1 FT /transl_table=1 FT /gene="HLA-E" FT /allele="HLA-E*01:03:01:01new" FT /product="MHC class I antigen" FT /db_xref="GOA:P13747" FT /db_xref="HGNC:HGNC:4962" FT /db_xref="InterPro:IPR001039" FT /db_xref="InterPro:IPR003006" FT /db_xref="InterPro:IPR003597" FT /db_xref="InterPro:IPR007110" FT /db_xref="InterPro:IPR010579" FT /db_xref="InterPro:IPR011161" FT /db_xref="InterPro:IPR011162" FT /db_xref="InterPro:IPR013783" FT /db_xref="InterPro:IPR036179" FT /db_xref="InterPro:IPR037055" FT /db_xref="PDB:1KPR" FT /db_xref="PDB:1KTL" FT /db_xref="PDB:1MHE" FT /db_xref="PDB:2ESV" FT /db_xref="PDB:3AM8" FT /db_xref="PDB:3BZE" FT /db_xref="PDB:3BZF" FT /db_xref="PDB:3CDG" FT /db_xref="PDB:3CII" FT /db_xref="PDB:5W1V" FT /db_xref="PDB:5W1W" FT /db_xref="PDB:6GGM" FT /db_xref="PDB:6GH1" FT /db_xref="PDB:6GH4" FT /db_xref="PDB:6GHN" FT /db_xref="PDB:6GL1" FT /db_xref="UniProtKB/Swiss-Prot:P13747" FT /protein_id="SCQ83612.1" FT /translation="MVDGTLLLLLSEALALTQTWAGSHSLKYFHTSVSRPGRGEPRFIS FT VGYVDDTQFVRFDNDAASPRMVPRAPWMEQEGSEYWDRETRSARDTAQIFRVNLRTLRG FT YYNQSEAGSHTLQWMHGCELGPDGRFLRGYEQFAYDGKDYLTLNEDLRSWTAVDTAAQI FT SEQKSNDASEAEHQRAYLEDTCVEWLHKYLEKGKETLLHLEPPKTHVTHHPISDHEATL FT RCWALGFYPAEITLTWQQDGEGHTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRYTCH FT VQHEGLPEPVTLRWKPASQPTIPIVGIIAGLVLLGSVVSGAVVAAVIWRKKSSGGKGGS FT YSKAEWSDSAQGSESHSL" FT exon 29..92 FT /gene="HLA-E" FT /allele="HLA-E*01:03:01:01new" FT /number=1 FT intron 93..222 FT /gene="HLA-E" FT /allele="HLA-E*01:03:01:01new" FT /number=1 FT exon 223..492 FT /gene="HLA-E" FT /allele="HLA-E*01:03:01:01new" FT /number=2 FT intron 493..736 FT /gene="HLA-E" FT /allele="HLA-E*01:03:01:01new" FT /number=2 FT exon 737..1012 FT /gene="HLA-E" FT /allele="HLA-E*01:03:01:01new" FT /number=3 FT intron 1013..1633 FT /gene="HLA-E" FT /allele="HLA-E*01:03:01:01new" FT /number=3 FT exon 1634..1909 FT /gene="HLA-E" FT /allele="HLA-E*01:03:01:01new" FT /number=4 FT intron 1910..2033 FT /gene="HLA-E" FT /allele="HLA-E*01:03:01:01new" FT /number=4 FT exon 2034..2150 FT /gene="HLA-E" FT /allele="HLA-E*01:03:01:01new" FT /number=5 FT intron 2151..2900 FT /gene="HLA-E" FT /allele="HLA-E*01:03:01:01new" FT /number=5 FT exon 2901..2933 FT /gene="HLA-E" FT /allele="HLA-E*01:03:01:01new" FT /number=6 FT intron 2934..3037 FT /gene="HLA-E" FT /allele="HLA-E*01:03:01:01new" FT /number=6 FT exon 3038..3078 FT /gene="HLA-E" FT /allele="HLA-E*01:03:01:01new" FT /number=7 FT 3'UTR 3079..3245 FT /gene="HLA-E" FT /allele="HLA-E*01:03:01:01new" FT /note="3'UTR" XX SQ Sequence 3245 BP; 645 A; 915 C; 969 G; 716 T; 0 other; aagttctcag gactcagagg ctgggatcat ggtagatgga accctccttt tactcctctc 60 ggaggccctg gcccttaccc agacctgggc gggtgagtgc ggggtcggga tggaaacggc 120 ctctaccggg agtagagagg ggccggcccg gcgggggcga aggactcggg gagccgcgcc 180 gggaggaggg tcgggccgat ctcagcccct cctcgccccc aggctcccac tccttgaagt 240 atttccacac ttccgtgtcc cggcccggcc gcggggagcc ccgcttcatc tctgtgggct 300 acgtggacga cacccagttc gtgcgcttcg acaacgacgc cgcgagtccg aggatggtgc 360 cgcgggcgcc gtggatggag caggaggggt cagagtattg ggaccgggag acacggagcg 420 ccagggacac cgcacagatt ttccgagtga acctgcggac gctgcgcggc tactacaatc 480 agagcgaggc cggtgagtga ccccggccag gggagcaggt cacgacccct ccccatcccc 540 cacggacggc gcgggtcccc tcgaatcttc gggtcccaga ttcaccccaa ggctgcggaa 600 cccgcccaga ccctagaccg gggagagtct caggcgcctt tacccggttc tttttcagtt 660 taggccaaaa tgcccacagg gtggtggcga cgggggcggg gcttggtggg cgggactgac 720 taaggggcgg ggccagggtc tcacaccctg cagtggatgc atggctgcga gctggggccc 780 gacgggcgct tcctccgcgg gtatgaacag ttcgcctacg acggcaagga ttatctcacc 840 ctgaatgagg acctgcgctc ctggaccgcg gtggacacgg cggctcagat ctccgagcaa 900 aagtcaaatg atgcctctga ggcggagcac cagagagcct acctggaaga cacatgcgtg 960 gagtggctcc acaaatacct ggagaagggg aaggagacgc tgcttcacct gggtaagagg 1020 gtccacaggg ctactctccc atctccttct tgggctagga ctgtgcccac agctgacaga 1080 cctcaaacag tagaagaaac agggatggag gccagaatac cactcctccc ttggatcagg 1140 agagggagct gtcacctgag gtacaggaga tcctatacca cagagtgact ctcttaaagg 1200 gccagacctc tctcaggggc aattaaggaa tctagtctcg ctggagattc catccttcag 1260 atgaactgat gagcagttct ctttgactcc cagtattagg aatcacgggg gagtttctct 1320 cgtgcctgat tctcagcccc acaccaagag tttttggagg tctgactcca gcttttctca 1380 gtcactcagc atccacacag gccaggacca gaaatccctt ttcaccttct accctgggct 1440 agctcatccc gattctagaa ctttccaagg aataagaggc tatcccagat ccctaagtcc 1500 aggctggtgt caaggttttg tcctcttctc ctactataat tgtcctcttc cttctcagga 1560 tggtcacatg ggtgctgctg gagtgtccca tgagagatac aaagtgcctg aattttctga 1620 ctcttcccct cagagccccc aaagacacac gtgactcacc accccatctc tgaccatgag 1680 gccaccctga ggtgctgggc cctgggcttc taccctgcgg agatcacact gacctggcag 1740 caggatgggg agggccatac ccaggacacg gagctcgtgg agaccaggcc tgcaggggat 1800 ggaaccttcc agaagtgggc agctgtggtg gtgccttctg gagaggagca gagatacacg 1860 tgccatgtgc agcatgaggg gctacccgag cccgtcaccc tgagatggag taaggagggg 1920 gatgggaggt catgtctctt ctcagggaaa gcgggagccc ttctggagcc cttccgcagg 1980 gtcagggctg aggcctgggg gtcagggccc cttacgttcc cctcttttcc cagagccggc 2040 ttcccagccc accatcccca tcgtgggcat cattgctggc ctggttctcc ttggatctgt 2100 ggtctctgga gctgtggttg ctgctgtgat atggaggaag aagagctcag gtggggaagg 2160 gagaagggtg gggtctgagt tttcttgtcc cactgggtgt ttcaagccct aggtaaaagt 2220 gtgtcctgcc tcgttactgg gaagcaccat ccacacacac gagcctaccc agcctggggc 2280 cctgtgtgcc agcacctact cttttttttt gagacggagt cttggctctg tcacccaggc 2340 tggagtgcaa tggcgtggtt tcagctcact gcaacctccg cctcccaggt tcaagcaatt 2400 ctcctgcctc agcctcccta gtagctggga ctacacatgc gtgccaccac acctggctaa 2460 tttttttttt tgtattttta gtggagatgg ggtttcacta tgttggccag gctggtctcg 2520 aactcctgac tttgtgatct gcctgcctcg gcctcccaaa gtgctgggat tacagtcgtg 2580 agccaccgca cccagccgca cctactcttt tgtaaagcac ctgtgacaat gaaggacaga 2640 tttatcacct tgacgattgt ggtgatgggg acctgatccc agcagtcaca ggtcacaggg 2700 gaaggtccct gctgaagaca gacctcagaa gggcagttga tccaggaccc acacctgctt 2760 tcttcacgtt tcctgatcct gccctgggtc tgcagtcaca gttcaggaaa cttctctggg 2820 atccaaaact aggaggttcc tctaggacct tatggccctg cctcctccct ggcccctcac 2880 aggacatttt cttccaacag gtggaaaagg agggagctac tctaaggctg agtgtaagtg 2940 cggggcggga gtgtggagga gctcgcccac cctataattc ctcctgcacc acatctcctg 3000 tgggctctga ccaggtcttg tttttgttct accccaggga gcgacagtgc ccaggggtct 3060 gagtctcaca gcttgtaaag gtgagattct gggggtctga agtgggtgga gggtggggca 3120 gaggggacag gactgggttg tggggatttt ttgattcaga atttttgagt gtgtggtggg 3180 ctgttcagag tgtcatcact taccgtgact gacctgaatt tgttcatgac tattttcttc 3240 tgtag 3245 //