Dbfetch
ID LT599263; SV 1; linear; genomic DNA; STD; HUM; 3334 BP. XX AC LT599263; XX DT 14-JUL-2016 (Rel. 129, Created) DT 19-JUL-2017 (Rel. 133, Last updated, Version 3) XX DE Homo sapiens, HLA-B gene for MHC class I antigen, cell line DE DKMS-LSL-B-1201, allele HLA-B*44:new XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-3334 RA Albrecht V.; RT ; RL Submitted (06-JUN-2016) to the INSDC. RL Research and Development, DKMS Life Science Lab, Fiedler Str. 43, Saxony, RL 01307 Dresden, GERMANY. XX RN [2] RX DOI; https://doi.org/10.1111/tan.13057. RX PUBMED; 28547825. RA Albrecht V., Zweiniger C., Surendranath V., Lang K., Schofl G., Dahl A., RA Winkler S., Lange V., Bohme I., Schmidt A.H.; RT "Dual redundant sequencing strategy: Full-length gene characterisation of RT 1056 novel and confirmatory HLA alleles"; RL HLA. -:1-9(2017). XX DR MD5; 4e1ddfa709858f23a02f9a0f35793215. DR IMGT/HLA; HLA-B*44:27:01:01; HLA01489. XX FH Key Location/Qualifiers FH FT source 1..3334 FT /organism="Homo sapiens" FT /mol_type="genomic DNA" FT /cell_line="DKMS-LSL-B-1201" FT /db_xref="taxon:9606" FT exon 1..357 FT /gene="HLA-B" FT /allele="HLA-B*44:new" FT /number=1 FT CDS join(285..357,487..756,1000..1275,1851..2126,2231..2347, FT 2789..2821,2928..2971) FT /codon_start=1 FT /transl_table=1 FT /gene="HLA-B" FT /allele="HLA-B*44:new" FT /product="MHC class I antigen" FT /function="antigen presenting molecule" FT /db_xref="GOA:A0A0B7MH47" FT /db_xref="InterPro:IPR001039" FT /db_xref="InterPro:IPR003006" FT /db_xref="InterPro:IPR003597" FT /db_xref="InterPro:IPR007110" FT /db_xref="InterPro:IPR010579" FT /db_xref="InterPro:IPR011161" FT /db_xref="InterPro:IPR011162" FT /db_xref="InterPro:IPR013783" FT /db_xref="InterPro:IPR036179" FT /db_xref="InterPro:IPR037055" FT /db_xref="UniProtKB/TrEMBL:A0A0B7MH47" FT /protein_id="SBW38484.1" FT /translation="MRVTAPRTLLLLLWGAVALTETWAGSHSMRYFYTAMSRPGRGEPR FT FITVGYVDDTLFVRFDSDATSPRKEPRAPWIEQEGPEYWDRETQISKTNTQTYRENLRT FT ALRYYNQSEAGSHIIQRMYGCDVGPDGRLLRGYDQDAYDGKDYIALNEDLSSWTAADTA FT AQITQRKWEAARVAEQDRAYLEGLCVESLRRYLENGKETLQRADPPKTHVTHHPISDHE FT ATLRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDRTFQKWAAVVVPSGEEQRY FT TCHVQHEGLPKPLTLRWEPSSQSTIPIVGIVAGLAVLAVVVIGAVVATVMCRRKSSGGK FT GGSYSQAASSDSAQGSDVSLTA" FT intron 358..486 FT /gene="HLA-B" FT /allele="HLA-B*44:new" FT /number=1 FT exon 487..756 FT /gene="HLA-B" FT /allele="HLA-B*44:new" FT /number=2 FT intron 757..999 FT /gene="HLA-B" FT /allele="HLA-B*44:new" FT /number=2 FT exon 1000..1275 FT /gene="HLA-B" FT /allele="HLA-B*44:new" FT /number=3 FT intron 1276..1850 FT /gene="HLA-B" FT /allele="HLA-B*44:new" FT /number=3 FT exon 1851..2126 FT /gene="HLA-B" FT /allele="HLA-B*44:new" FT /number=4 FT intron 2127..2230 FT /gene="HLA-B" FT /allele="HLA-B*44:new" FT /number=4 FT exon 2231..2347 FT /gene="HLA-B" FT /allele="HLA-B*44:new" FT /number=5 FT intron 2348..2788 FT /gene="HLA-B" FT /allele="HLA-B*44:new" FT /number=5 FT exon 2789..2821 FT /gene="HLA-B" FT /allele="HLA-B*44:new" FT /number=6 FT intron 2822..2927 FT /gene="HLA-B" FT /allele="HLA-B*44:new" FT /number=6 FT exon 2928..3334 FT /gene="HLA-B" FT /allele="HLA-B*44:new" FT /number=7 XX SQ Sequence 3334 BP; 619 A; 970 C; 1050 G; 695 T; 0 other; gatcaggacg aagtcccagg tcccggacgg ggctctcagg gtctcaggct ccgagggccg 60 cgtctgcaat ggggaggcgc agcgttgggg attccccact cccacgagtt tcacttcttc 120 tcccaaccta tgtcgggtcc ttcttccagg atactcgtga cgcgtcccca tttcccactc 180 ccattgggtg tcgggtgtct agagaagcca atcagtgtcg ccggggtccc agttctaaag 240 tccccacgca cccacccgga ctcagaatct cctcagacgc cgagatgcgg gtcacggcgc 300 cccgaaccct cctcctgctg ctctgggggg cagtggccct gaccgagacc tgggccggtg 360 agtgcggggt cgggagggaa atggcctctg tggggaggag agaggggacc gcaggcgggg 420 gcgcaggacc cggggagccg cgccgggagg agggtcgggc gggtctcagc ccctcctcgc 480 ccccaggctc ccactccatg aggtatttct acaccgccat gtcccggccc ggccgcgggg 540 agccccgctt catcaccgtg ggctacgtgg acgacacgct gttcgtgagg ttcgacagcg 600 acgccacgag tccgaggaag gagccgcggg cgccatggat agagcaggag gggccggagt 660 attgggaccg ggagacacag atctccaaga ccaacacaca gacttaccga gagaacctgc 720 gcaccgcgct ccgctactac aaccagagcg aggccggtga gtgaccccgg cccggggcgc 780 aggtcacgac tccccatccc ccacgtacgg cccgggtcgc cccgagtctc cgggtccgag 840 atccgccccc gaggccgcgg gacccgccca gaccctcgac cggcgagagc cccaggcgcg 900 tttacccggt ttcattttca gttgaggcca aaatccccgc gggttggtcg gggcggggcg 960 gggctcgggg gacggggctg accgcggggc cggggccagg gtctcacatc atccagagga 1020 tgtacggctg cgacgtgggg ccggacgggc gcctcctccg cgggtatgac caggacgcct 1080 acgacggcaa ggattacatc gccctgaacg aggacctgag ctcctggacc gcggcggaca 1140 ccgcggctca gatcacccag cgcaagtggg aggcggcccg tgtggcggag caggacagag 1200 cctacctgga gggcctgtgc gtggagtcgc tccgcagata cctggagaac gggaaggaga 1260 cgctgcagcg cgcgggtacc aggggcagtg gggagccttc cccatctcct ataggtcgcc 1320 ggggatggcc tcccacgaga agaggaggaa aatgggatca gcgctagaat gtcgccctcc 1380 cttgaatgga gaatggcatg agttttcctg agtttcctct gagggccccc tcttctctct 1440 aggacaatta agggatgacg tctctgagga aatggagggg aagacagtcc ctagaatact 1500 gatcaggggt cccctttgac ccctgcagca gccttgggaa ccgtgacttt tcctctcagg 1560 ccttgttctc tgcctcacac tcagtgtgtt tggggctctg attccagcac ttctgagtca 1620 ctttacctcc actcagatca ggagcagaag tccctgttcc ccgctcagag actcgaactt 1680 tccaatgaat aggagattat cccaggtgcc tgcgtccagg ctggtgtctg ggttctgtgc 1740 cccttcccca ccccaggtgt cctgtccatt ctcaggctgg tcacatgggt ggtcctaggg 1800 tgtcccatga gagatgcaaa gcgcctgaat tttctgactc ttcccatcag accccccaaa 1860 gacacatgtg acccaccacc ccatctctga ccatgaggcc accctgaggt gctgggccct 1920 gggcttctac cctgcggaga tcacactgac ctggcagcgg gatggcgagg accaaactca 1980 ggacaccgag cttgtggaga ccagaccagc aggagataga accttccaga agtgggcagc 2040 tgtggtggtg ccttctggag aagagcagag atacacatgc catgtacagc atgaggggct 2100 gccgaagccc ctcaccctga gatggggtaa ggagggggat gaggggtcat atctgttctc 2160 agggaaagca ggagcccttc tggagccctt cagcagggtc agggcccctc atcttcccct 2220 cctttcccag agccatcttc ccagtccacc atccccatcg tgggcattgt tgctggcctg 2280 gctgtcctag cagttgtggt catcggagct gtggtcgcta ctgtgatgtg taggaggaag 2340 agctcaggta gggaaggggt gaggggtggg gtctgggttt tcttgtccca ctgggggttt 2400 caagccccag gtagaagtgt tccctgcctc attactggga agcagcatcc acacaggggc 2460 taacgcagcc tgggaccctg tgtgccagca cttactcttt tgtgcagcac atgtgacaat 2520 gaaggacaga tgtatcgcct tgatggttgt ggtgttgggg tcctgattcc agcattcatg 2580 agtcagggga aggtccctgc taaggacaga ccttaggagg gcagttggtc caggacccac 2640 acttgctttc ctcgtgtttc ctgatcctgc cctgggtctg tagtcatact tctggaaatt 2700 ccttttggtt ccaagacgag gaggttcctc taagatctca tggtcctgct tcctcccagt 2760 cccctcacag gacattttct tcccacaggt ggaaaaggag ggagctactc tcaggctgcg 2820 tgtaagtggt gggggtggga gtgtggagga gctcacccac cccataattc ctcctgtccc 2880 acgtctcctg cgggctctga ccaggtcctg tttttgttct actccagcca gcgacagtgc 2940 ccagggctct gatgtgtctc tcacagcttg aaaaggtgag attcttgggg tctagagtgg 3000 gtggggtggc gggtctgggg gtgggtgggg cagtggggaa aggcctgggt aatggagatt 3060 ctttgattgg gatgtttcgc gtgtgtcgtg ggctgttcag agtgtcatca cttaccatga 3120 ctaaccagaa tttgttcatg actgttgttt tctgtagcct gagacagctg tcttgtgagg 3180 gactgagatg caggatttct tcacgcctcc cctttgtgac ttcaagagcc tctggcatct 3240 ctttctgcaa aggcacctga atgtgtctgc gtccctgtta gcataatgtg aggaggtgga 3300 gagacagccc acccttgtgt ccactgtgac ccct 3334 //