Dbfetch
ID LT596618; SV 1; linear; genomic DNA; STD; HUM; 5155 BP. XX AC LT596618; XX DT 10-JAN-2018 (Rel. 135, Created) DT 10-JAN-2018 (Rel. 135, Last updated, Version 6) XX DE Homo sapiens HLA-DPB1 gene for MHC class II antigen, allele DE HLA-DPB1*15:01:02new, clone AN00171 XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-5155 RA Marsh S.; RT ; RL Submitted (26-MAY-2016) to the INSDC. RL HLA Informatics Group, ANRI, Royal Free Hospital, London, NW3 2QG, UNITED RL KINGDOM. XX RN [2] RA Marsh S.G.E.; RT "Full-length genomic HLA sequences"; RL Unpublished. XX DR MD5; c0ea6e8e684b8ba888d96e4710ffd479. XX FH Key Location/Qualifiers FH FT source 1..5155 FT /organism="Homo sapiens" FT /mol_type="genomic DNA" FT /clone="AN00171" FT /db_xref="taxon:9606" FT CDS join(<4216..4497,5045..>5155) FT /codon_start=3 FT /transl_table=1 FT /gene="HLA-DPB1" FT /allele="HLA-DPB1*15:01:02new" FT /product="MHC class II antigen" FT /function="antigen presenting molecule" FT /db_xref="GOA:A0A2K4N7U2" FT /db_xref="InterPro:IPR003006" FT /db_xref="InterPro:IPR003597" FT /db_xref="InterPro:IPR007110" FT /db_xref="InterPro:IPR013783" FT /db_xref="InterPro:IPR036179" FT /db_xref="UniProtKB/TrEMBL:A0A2K4N7U2" FT /protein_id="SBV08722.1" FT /translation="QPKVNVSPSKKGPLQHHNLLVCHVTDFYPGSIQVRWFLNGQEETA FT GVVSTNLIRNGDWTFQILVMLEMTPQQGDVYICQVEHTSLDSPVTVEWKAQSDSARSKT FT LTGAGGFVLGLIICGVGIFMHRRSKK" FT exon 4216..4497 FT /gene="HLA-DPB1" FT /allele="HLA-DPB1*15:01:02new" FT /number=1 FT intron 4498..5044 FT /gene="HLA-DPB1" FT /allele="HLA-DPB1*15:01:02new" FT /number=1 FT exon 5045..5155 FT /gene="HLA-DPB1" FT /allele="HLA-DPB1*15:01:02new" FT /number=2 XX SQ Sequence 5155 BP; 1358 A; 1099 C; 1470 G; 1228 T; 0 other; agaattacgt gtaccaggga cggcaggaat gctacgcgtt taatgggaca cagcgcttcc 60 tggagagata catctacaac cggcaggagt acgcgcgctt cgacagcgac gtgggagagt 120 tccgggcggt gacggagctg gggcggcctg ctgcggagta ctggaacagc cagaaggacc 180 tcctggagga gaggcgggca gtgccggaca ggatgtgcag acacaactac gagctggtcg 240 ggcccatgac cctgcagcgc cgaggtgagt gagggctttg ggccggcggt cccagggcag 300 ccccgtgggc ccgtgcccag ggcgcaggag cagccgggtt ggcctaaggg accttagtgc 360 caagcggaaa ggggactttg ggttggggat tcattgtggg gagcccatct ggagcttgtc 420 aggggagcga gcgcggggac ctggactggg ctgagcatgg agtgaggagg acgggagcag 480 agagaccccc gggacttcat caggcctggc agctgactgc atgtggggtg agaaaaggag 540 gccacaggac agcgcgcaag ggtgtggtgt ggagatggag gtggagatgg cacagcaggc 600 cacacagaga agaaacctgc agggagatag ctgggtttga ggtgcttgag gggcagatgg 660 gtggtctgat gggcaggtag acagaagggt ctgcagccgg ggaggagact gggatacatg 720 agaccatcca gggagagagg acccaggggg aagagcaaag gactggatcc tgggaactgg 780 acagttgtga tttggccaag acagaaaagc ctgtgaaaga gaccaataaa acccaagtgc 840 agtgtgagga gaggcccgca gagaagagtc ttggaagctg aggggaggtg acctcagcag 900 cacagtggac agcggtgcca gtgacttggg aaggtcagaa aacagaagat ggaaagtggg 960 tttggaaacc agggagacct ggggagagca ggttggccgc agcggcagga gctggaatgg 1020 gagggggtgc atgaggctga gtgtggcgca tcctcctcgg ggctgagatg gattttactt 1080 gtcttgggtt ccccacggct ggcacagggc agtgtctgag ttcattcatc tttttccttc 1140 aggaagtctg ggtgtaaagg gatggagaga ggtgaggtgt gtgcagtaag aggatttctc 1200 aaggatggga caggaaggcc ttggagcttt ggcttcctcc tgtgaacttg tggggtgggg 1260 agcctggtgc accaacctga gggacctgag ggagtagtat caggatgtgg gattgagccc 1320 tggacctttt ttctagaaag aggaaaaaaa tgaagggagg aggaggagga agctggggag 1380 atcacacctt tgattttctt gttcctggaa agtgaaagga agttcacctg ctaggagtga 1440 gaaggtggac acacagggtg gggatgaggt gagtgacatg agcttaggaa agttgctgag 1500 gtaattggtt gagagaggtg ttcaaataaa agtaatgcaa ttggcaaaaa ctgttactaa 1560 gactttgtag aggcacaaat cagtgacatg gcagcatctt ctttcacagt aatcaactgc 1620 cagattgcag ggagccctga taccagccta aggagtgtga gtttctcctc taggcccaca 1680 ggtccccaac ctcactcctc cgaagactct cctggagatc atctgtgatg tgcagatacc 1740 cagactcact gccccgagac tcagattccc tgggtaggga ggtcggggga tctctgcttg 1800 taatcagctc cctagaggtt cccatgtagc cggataagta ttgtcagaac actgaagatt 1860 tttgaaaaat gaaaaagaga aggttggaga tgtgtcttca gaagactact aagggtgctg 1920 ggtagaggag ggaccagagg cagggagatg aggtaggaaa ctgctattat ttgtcaggga 1980 aattgcaatc aagaaatgag ttagaacagg gaaaacacag aggcagggga gaggtggaag 2040 ggggaggaaa ggagtagtga caattccagg gtgtatgctc acccaaatct agaagtaatt 2100 gagcaaatgt tttctgggca ttagagaagg caactagaac aaacaggaat ccttgccttg 2160 gtgaaatgta tttgaactgg gtcagaaatg aggccattgg gtatcaagcc ttaactccag 2220 cgccccctgg aggtcgctga tgtggctcca ggctgacctg ctcctgtcaa agaatattga 2280 gcaagatgcc tctcatggaa tgttctggga ccttaaaaca gatacccaag tattccccct 2340 gatttcatgg ttcccagaag ctctatgggg aagaaattgt acgtaattca caactgagat 2400 ttagacataa gttgaatagt gtaatggacg ttgagttaac cgaggtaatg aagtagtgag 2460 acacaggtgc ccctgaaata aactcacatt gagggaagag gctgacaatg tggatcagtc 2520 tgtaaacaag gcaaaaatac aatagggagt aagggttgtg tgtcagttca agactgtact 2580 tttacctggc ccagcgccat gttggggtat ttgtgttctc caggaagtag aaaggaaaga 2640 actgagtgat tagggaccta gaagactaat ttgagacatt cctcttgatg aactgttctc 2700 tagggtagtc ctctgaaaga gctgttctct agtggatctc cctgaatgaa ctgttctcta 2760 ggagcacttg acccttttct gtgtttgttt tttgttttgt gtttgtgttt gtttttgaga 2820 caggttctcg ctctgtctcc caggctggag tgctgtggcg ccatcatgac tcactgcagc 2880 ctcaacctcc tgggctcaag tgatcctcct gcctcagcct cccatgtagc tagaactaca 2940 gatacatgta ccaccatgtc tggctaattt atttttcttt ttagagatgg gttctcacta 3000 tgttgcccag gctggtctcg aaaccctggg ctcaagtgat cctcacgcct cagcctccca 3060 aagtgctaag attataggca tgaccaccat gcctggcctt ttctgccttc cgagaaggaa 3120 aaaggtactg gtggcagaga tccaaaagaa aagttgccag tggcagtgtg gaaattgacc 3180 tgagaacaac agaacaagct ggggcacaaa tgcaaagatg cagagggagg caacatctgg 3240 ttatctgtga gaccttcatg ggacctgaag acacatcctt ttggaaaagg atgggatttc 3300 tactactcaa gcatgtaggg gctcaggata ttatgtaaat atgaagattt tgagtttttg 3360 taagtgaggt aaaaaaaata cctaggttat ttacagaata agacatgtca agctctcttc 3420 attttctttg tattttcatg aaataaaggt attagattaa caggccacca taatgccatt 3480 gtctgtatat cttaatttca agatattatt tgagtaattt ttgcatcctt tgtatcaaga 3540 tagaactttg aaaagacagg taatttcaca gttgattaaa tattctttgc ccaaattact 3600 tttggttaaa atttctccta tatgtgctac agagtgcaaa ctctgtctcc ctgccattcc 3660 gctatatact tactaattat tattttattc aagatcatgc atgctctact tgaaggtcta 3720 tcttttcagt gctaccctta cccactagcc taatcacatt atatctattt tcaacatcta 3780 ggaatcaatt acgtagtgaa catgcctaag aaataataat ctgggcagat gcagtggctc 3840 aggcctgtaa tcccagcact ttgagaggct gagcgggtgg atcacttgag gtcaggagtt 3900 ggtcaagtgc tcctagagaa ccaggctgac caacatggag aaaccttgtc tctactgata 3960 atacaaaaat tagccaggtg aggtggcagg cacctataat cccagctatt cgggaggctg 4020 aggaaggaga attgcttgaa cccctgaggt ggaggttgca gtgagccaat attgcgccac 4080 tgcattccag acttggcaac agagcgacac tccacctcaa caaaaagaaa gaaagagcga 4140 gattacgtct caaaaaagga aggaaggaag gacaatctca aatgctattt cattattttc 4200 cttccccact cgtagtccag cctaaggtga acgtttcccc ctccaagaag gggcccctgc 4260 agcaccacaa cctgcttgtc tgccacgtga cagatttcta cccaggcagc attcaagtcc 4320 gatggttcct gaatggacag gaggaaacag ctggggtcgt gtccaccaac ctgatccgta 4380 atggagactg gaccttccag atcctggtga tgctggaaat gaccccccag cagggagacg 4440 tctacatctg ccaagtggag cacaccagcc tggacagtcc tgtcaccgtg gagtggagtg 4500 agtctctgat gaccgtctag accccacctc tgaagagcag gggactctct ggctctgggg 4560 tccactcatc ttatcttctg catctatacc ctggggccat gtccaaaccc catctttctt 4620 ctataccagc tcctgagcat agtttgaagc cagggcaatg gagacttcct gaccttggct 4680 taggggttcc tgaagattca tagttctccc ccttgtcaga gaatctaggg acactggctg 4740 atctcgaaac cctcacacac aggaactgac ctcacacata ggaacagttc tcttctttca 4800 gcattttagc ctcttctcag gcattttgag aggcaacttc tagaatcagc atttgccacc 4860 ttgttgaggt cacacccctg ttccggacat gagggtggct ctttctgaat ttcctcttag 4920 caagcttttt cccctgcact gtcttcatcc cgatattctg catcacgctc cagaatctca 4980 gacaggacat gagtagggat gcagctggtg gaggtgacac taaacctggg tctgtccttc 5040 ccagaggcac agtctgattc tgcccggagt aagacattga cgggagctgg gggcttcgtg 5100 ctggggctca tcatctgtgg agtgggcatc ttcatgcaca ggaggagcaa gaaag 5155 //