Dbfetch
ID LT596614; SV 1; linear; genomic DNA; STD; HUM; 5214 BP. XX AC LT596614; XX DT 10-JAN-2018 (Rel. 135, Created) DT 10-JAN-2018 (Rel. 135, Last updated, Version 6) XX DE Homo sapiens HLA-DPB1 gene for MHC class II antigen, allele DE HLA-DPB1*04:01:01new, clone AN00169 XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-5214 RA Marsh S.; RT ; RL Submitted (26-MAY-2016) to the INSDC. RL HLA Informatics Group, ANRI, Royal Free Hospital, London, NW3 2QG, UNITED RL KINGDOM. XX RN [2] RA Marsh S.G.E.; RT "Full-length genomic HLA sequences"; RL Unpublished. XX DR MD5; b64f046d1d532f05fd36fb1a455c3453. XX FH Key Location/Qualifiers FH FT source 1..5214 FT /organism="Homo sapiens" FT /mol_type="genomic DNA" FT /clone="AN00169" FT /db_xref="taxon:9606" FT CDS join(<4275..4556,5104..>5214) FT /codon_start=3 FT /transl_table=1 FT /gene="HLA-DPB1" FT /allele="HLA-DPB1*04:01:01new" FT /product="MHC class II antigen" FT /function="antigen presenting molecule" FT /db_xref="GOA:A0A2K4N7U9" FT /db_xref="InterPro:IPR003006" FT /db_xref="InterPro:IPR003597" FT /db_xref="InterPro:IPR007110" FT /db_xref="InterPro:IPR013783" FT /db_xref="InterPro:IPR036179" FT /db_xref="UniProtKB/TrEMBL:A0A2K4N7U9" FT /protein_id="SBV08718.1" FT /translation="QPRVNVSPSKKGPLQHHNLLVCHVTDFYPGSIQVRWFLNGQEETA FT GVVSTNLIRNGDWTFQILVMLEMTPQQGDVYTCQVEHTSLDSPVTVEWKAQSDSAQSKT FT LTGAGGFVLGLIICGVGIFMHRRSKK" FT exon 4275..4556 FT /gene="HLA-DPB1" FT /allele="HLA-DPB1*04:01:01new" FT /number=1 FT intron 4557..5103 FT /gene="HLA-DPB1" FT /allele="HLA-DPB1*04:01:01new" FT /number=1 FT exon 5104..5214 FT /gene="HLA-DPB1" FT /allele="HLA-DPB1*04:01:01new" FT /number=2 XX SQ Sequence 5214 BP; 1391 A; 1103 C; 1487 G; 1233 T; 0 other; agaattacct tttccaggga cggcaggaat gctacgcgtt taatgggaca cagcgcttcc 60 tggagagata catctacaac cgggaggagt tcgcgcgctt cgacagcgac gtgggggagt 120 tccgggcggt gacggagctg gggcggcctg ctgcggagta ctggaacagc cagaaggaca 180 tcctggagga gaagcgggca gtgccggaca ggatgtgcag acacaactac gagctgggcg 240 ggcccatgac cctgcagcgc cgaggtgagt gagggctttg ggccggcggt cccagggcag 300 ccccgcgggc ccgtgcccag ggcgcaggag cagccgggtt ggcctaaggg accttagtgc 360 cgggcggaaa ggggactttg ggttggggat tcatgggggg agcccatctg gagcttgtca 420 ggggagcgag cgcggggacc tggactgggc tgagcatgga gtgaggagga cgagagcaga 480 gagacccccg ggacttcatc aggcctggca gctgactgca tgtggggtga aaaaaggaag 540 ccacaggaca gcgcacaagg gtatggtgtg gagatggagg tggagatggc acagcaggcc 600 acacagagaa gaaacctaca gggaggtagc tgggtttgag gtgcttgagg ggcagatggg 660 tggtctgatg ggcaggtaga cagaagggtc tgcagccggg gaggagactg agatacatga 720 gaccatccag ggagagggga cccaggggga agagcaaagg accggatcct gggaactgga 780 cagttgtgat ttggccaaga cagaaaagcc tgtgaaagag accaaaaaaa cccaagtgca 840 gtgtgaggag aggcccgcag agaagagtct tggaagctga ggggaggtga cctcagcagc 900 acagtggaca gcggtgccag tgacttggga aggtcagaaa acagaagatg gaaagtgggt 960 ttggaaacca gggagacctg gggagagcag gttggccgca gcggcaggag ctggaatggg 1020 agggggtgca tgaggctgag tgtggcgcat cctcctcggg gctgagatgg attttacttg 1080 tcttgggttc cccacggctg tcacagggca gtgtctcagt tcattcgtct ttttccttca 1140 ggaagtctgg gtgtaaaggg atggagagag gtgaggtgtg tgcagtaaga ggatttctca 1200 aggatgggac aggaaggcct tggagctttg gcttcctcct gtgaacttgt ggggtgggga 1260 gcctggtgca ccaacctgag ggacttgagg gagtagtatc aggatgtggg attgagccct 1320 ggaccttttt tctagaaaga ggaaaaaaat gaagggagga ggaggaggaa gctggggaga 1380 tcacaccttt gattttcttg ttcctggaaa gtgaaaggaa gttcacctgc tatgagtgag 1440 aaggtggaca cactgggtgg ggatgaggtg agtgacatga gcttaggaaa gttgctgagg 1500 taattggttg agagaggtgt tcaaataaaa ataacgcaat tggcaaaaac tgttactaag 1560 actttgtaga ggcaccaatc agtgacatgg cagcattttc tttcacagta atcaactgcc 1620 agattgcaga cagccctgat gccagcctaa ggagtgtggg tttctcctcc aggcccgcag 1680 gtccccaacc tcactcctct gaagactctt ctggagatcc tctgtgatgc acagatctcc 1740 agactcagtg cccccagact cagattccct gggtggggag gtctggggat ctctgcttgt 1800 aatcagctcc ctagaggttc ccatgtagcc agataagtat tgtcagaaca ctgaagattt 1860 ttgaaaaatg aaaaagagaa ggttggagat gtgtcttcag aagactacta agggtgctgg 1920 ctagaggagg gaccagaggc agggagatga ggtaggaaac tgctattatt tgtcagggaa 1980 attgcaatca aggcatgagt tagaacaggg aaaacacaga ggcaagggag aggtggaagg 2040 gggaggaaag aagtagtgac aattccaggg tggatgtcca cccaaatcta gaagtaattg 2100 agcaaatgtt ttctgggcat tagagaaggc aactagaaca aacaggaatc cttgccttgg 2160 tgaaatgtat ttgaactggg tcagaaatga ggccattggg tatcaggcct taactccagc 2220 gcaccctgga ggtcactgat gtggctccag gctgacctgc tcctgtcaaa gaatattgag 2280 caagatgcct ctcgtggaat gttctgggac cttaaaacag atacccaagt attccccctg 2340 atttcatggt tcccagaagc tctatgggga agaaattgta ggtaattcac aactgagatt 2400 tagacataag ttgaatagtg taatggacat tgagttaacc gaggtaatga agtagtgaga 2460 cacaggtgcc cctgaaataa actcacattg agggaagagg ctgacaatgt ggatcagtct 2520 gaaaacaagg caaaaataca atagggagta agggttgtgt gtcagttcaa gactgtactt 2580 ttacctggcc cagcgccatg ttagggtatt tgtgttctcc aggaagtaga aaggaaagaa 2640 ctgagtgatt agggacctag aagactaatt tgagacattc ctcttgatga gctgttctct 2700 agggtagtcc tctgaaagag ctgttctcta gtggatctcc ctgaatgaac tgttctctag 2760 gagcacttga cccttttctg tgtttgtttt ttgttttgtg tttgtgtttg tttttgagac 2820 aggttctcac tttgtctccc aggctggagt gctgtggcac catcatggct cactgcagcc 2880 tcaacctcct gggctcaagt gatcctcctg cctcagcctc ccatgtagct agaactacag 2940 atacacgtac caccatgtct ggctaattta tttttctttt tagagatggg ttctcactat 3000 gttgcccagg ccggtctcaa aaccctgggc tcaagtgatc ctcatgcctc aacctcccaa 3060 agtgctaaga ttataggcat gaccaccatg cctggccttt tctgctttct gaggaggaaa 3120 aaggtactgg tggcagagat ccaaaagaaa agttgccagt ggcagtgtgg aaattcacct 3180 gagaacaaca ggacaagctg gggcacaaat gcaaagatgc agagggaggc aacacctggt 3240 catctgtgag accttcatgg gacctgaaga cgcagcacag aggaggaact tgaaaaagga 3300 cgggatttct actactcaag catgtaggag ctcaggatat tctgtaaata tgaagatttt 3360 gagtttttgt aggtgaggta aaaaaataca taggtttttt acagaataag acatgtaaag 3420 ctctcttcat tttctttgta ttttcatgaa gttattagat tcacaggcca ccataatgcc 3480 attgtctgta tatcttaatt tcaagatatt atttgagtaa attttgcttc ctttgtatca 3540 agatagaact ttgaaaaggt aggtaatttc acagttgatc aaatattctt tgcccaaatt 3600 acttttggtt aaaatttctc ctaaatgtgc tacagagtgc aaactctgtc tccctgccat 3660 tccgctatat acttactaac tattatttta ttcaagatca tgcatgctct acttgaaggt 3720 ctatttctat cttttcaatg ctacccttac ccactagcct aatcacatta ttcctatttt 3780 caacatctag gaatcaatta catagtgaac atgcctaaga aataataatc tgggcagatg 3840 cagtggctca ggcccgtaat cccagccctt tgagaggccg agcgggtgga tcacttgagg 3900 tcaggcgttg gtcaagtgct cctagagaac caggctgacc aacatggaga aaccttgtct 3960 ctactaataa tacaaaaatt agccaggtga agtggcaggc acctataatc ccagctattc 4020 gggaggctga ggaaggagaa ttggttgaag cccagaggtg gaggttgcag tgagccaata 4080 ttgcgccact gcattccaga cttggcaaca gagtgacact ccatctcaac aaaaagaaag 4140 aatgaaagaa agaaagagcg agattatgtc tcaaaaaaaa ggaaggaagg aaggaaggaa 4200 ggaaggaagg aaggaaggaa ggaaagaagg acaatctcaa attctatttc attatttttc 4260 ttccacgctc ctagtccagc ctagggtgaa tgtttccccc tccaagaagg ggcccttgca 4320 gcaccacaac ctgcttgtct gccacgtgac ggatttctac ccaggcagca ttcaagtccg 4380 atggttcctg aatggacagg aggaaacagc tggggtcgtg tccaccaacc tgatccgtaa 4440 tggagactgg accttccaga tcctggtgat gctggaaatg accccccagc agggagatgt 4500 ctacacctgc caagtggagc acaccagcct ggatagtcct gtcaccgtgg agtggagtga 4560 gtctctgatg accctctaga ccccacctct gaagagcagg ggactctctg gctctggggt 4620 ccactcatct tatcttctgc atctataccc tggggccatg tccaaacccc atctttcttc 4680 tataccagct cctgagcata gtttgaagcc agggaaatgg agacttcctg accttggctt 4740 aggggttcct gaagattcat agttctcccc cttgtcagag aatctaggga cactgactgg 4800 tctcgaaacc ctcacactta ggaactgacc tcacacatag gaacagttct cttccttcag 4860 cattttagcc tcttctcagg cattttgaga ggcaacttcc agaatcagca tttgccacct 4920 tgttgaggtc acacccctgt tccagatatg agggtggctc tttctgaatt tcctcttagc 4980 aagctttttc cgctgcactg tcctcatccc gatatgctgc atcaggctcc agaatctcag 5040 acaggacatg agtagggatg cagctggtgg aggtgacact aaacctgggt ctgtccttcc 5100 cagaggcaca gtctgattct gcccagagta agacattgac gggagctggg ggcttcgtgc 5160 tggggctcat catctgtgga gtgggcatct tcatgcacag gaggagcaag aaag 5214 //