Dbfetch
ID LT575596; SV 1; linear; genomic DNA; STD; HUM; 4561 BP. XX AC LT575596; XX DT 24-MAR-2017 (Rel. 132, Created) DT 24-MAR-2017 (Rel. 132, Last updated, Version 1) XX DE Homo sapiens HLA-DQB1 gene for MHC class II antigen, allele HLA-DQB1*02:26, DE clone AN00136 XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-4561 RA Marsh S.; RT ; RL Submitted (07-APR-2016) to the INSDC. RL HLA Informatics Group, ANRI, Royal Free Hospital, London, NW3 2QG, UNITED RL KINGDOM. XX RN [2] RA Marsh S.G.E.; RT "Full-length genomic HLA sequences"; RL Unpublished. XX DR MD5; 92efc384615481656c5c3503c5024fac. XX FH Key Location/Qualifiers FH FT source 1..4561 FT /organism="Homo sapiens" FT /mol_type="genomic DNA" FT /clone="AN00136" FT /db_xref="taxon:9606" FT CDS join(<3144..3425,3942..4052,4538..>4561) FT /codon_start=3 FT /transl_table=1 FT /gene="HLA-DQB1" FT /allele="HLA-DQB1*02:26" FT /product="MHC class II antigen" FT /function="antigen presenting molecule" FT /db_xref="GOA:A0A1W1B6K4" FT /db_xref="InterPro:IPR003006" FT /db_xref="InterPro:IPR003597" FT /db_xref="InterPro:IPR007110" FT /db_xref="InterPro:IPR013783" FT /db_xref="InterPro:IPR036179" FT /db_xref="UniProtKB/TrEMBL:A0A1W1B6K4" FT /protein_id="SBL08733.1" FT /translation="EPTVTISPSRTEALNHHNLLVCSVTDFYPAQIKVRWFRNGQEETA FT GVVSTPLIRNGDWTFQILVMLEMTPQRGDVYTCHVEHPSLQSPITVEWRAQSESAQSKM FT LSGIGGFVLGLIFLGLGLIIHHRSQKGPQGPPPA" FT exon 3144..3425 FT /gene="HLA-DQB1" FT /allele="HLA-DQB1*02:26" FT /number=1 FT intron 3426..3941 FT /gene="HLA-DQB1" FT /allele="HLA-DQB1*02:26" FT /number=1 FT exon 3942..4052 FT /gene="HLA-DQB1" FT /allele="HLA-DQB1*02:26" FT /number=2 FT intron 4053..4537 FT /gene="HLA-DQB1" FT /allele="HLA-DQB1*02:26" FT /number=2 FT exon 4538..4561 FT /gene="HLA-DQB1" FT /allele="HLA-DQB1*02:26" FT /number=3 XX SQ Sequence 4561 BP; 1168 A; 1056 C; 1054 G; 1283 T; 0 other; ccagtttaag ggcatgtgct acttcaccaa cgggacagag tgcgtgcgtc ttgtgagcag 60 aagcatctat aaccgagaag agatcgtgcg cttcgacagc gacgtggggg agttccgggc 120 ggtgacgctg ctggggctgc ctgccgccga gtactggaac agccagaagg acatcctgga 180 gaggaaacgg gcggcggtgg acagggtgtg cagacacaac taccagttgg agctccgcac 240 gaccttgcag cggcgaggtg agcggcgtcg cccctctgcg aggcccaccc ttggccccaa 300 gtctctgcgc caggaggggc gaagggtcgt tgcctctgga acctgagccc cgtttgttcc 360 accccagagg acaggaggca gcggcgagag tggtgggggc aggtgcatcg gaggtgcggg 420 gacctagggc agagcagggg gacaggcaga gttggccagg ctgcctagtg tcgccccagc 480 ctacccgttc gtcggccttg tcctctgctc tgcatgttct tgcctcgtgc cttatgcatt 540 tgcctccttt tgccttacct ttgctaagca gctctctctg ctcagaatgc ccgccctctt 600 cccctgcccg cccgcccgcc ccgctagcac tgccccaccc agcaaggccc acgtgcacag 660 ctcttgcagc aggaagcttc aggcttagcc tggtggagtt agggctgttc cacaactgcg 720 cgcaggacat ccagcaatta cagttgtgaa ataagatatt ttaacttttg gcttcaaatc 780 attattcatc gtaattctgt tttcttaaat ggctctcatt catggcagag atctttgagg 840 tgagggtgtt ttaatcattg catgcctagt acctgacaca ttgactggta tgtggtgtga 900 gctcaatgat cttctgttaa attaatgaat aaatgtactc agctgcccat ccacttaggc 960 tcaagaaaaa aaaagaggta aacagagcct taaaaatgga ctttattaat tattttctat 1020 aattttgctt aatgctttaa agtaaactct tattgacttg gatcttaata gagtttgtga 1080 atacaaaatc tgaggaaaaa agtttttgct aaaaataaaa acaacgcttg aaagatattg 1140 taatgcagtt taaatttctt ttcttttttt tttttttttt tgagacggat tctcactctg 1200 tcgcccaggc cggagtgcag tggcgcgatc tcggctcact gcaagctccg cctcccgggt 1260 tcacgccatt ctcctgcctc agcctcctga gtaggtggga ttacaggcgc gtgccaccac 1320 gcccggctaa tttttttgta tttttagtag aggcggggtt tcaccgtgtt agccaggatg 1380 gtctggatct cctgacctca tgatccgccc gcctcggcct cccaaagtgc tgggattaca 1440 ggtgtgagcc acagtgcccg gccggcactt ttaatttctt agaaaagctg aacaaatggc 1500 acaatgcaaa gagcaaaagt tttggaataa atagattgaa gccattaaat tattggataa 1560 aaatagtttc gggttgcttt tggcctaggt tctcccctcc ccccatgact atccacttca 1620 ggaataaaca ttctgaaagt caattttacc catttagtga gcatttattt ctagacagtt 1680 gccttatcaa ataccatcta tgttacgtca tttaatctca cagttacttg tgcatcagag 1740 attagcatca ccactttata tattggtaca tgataaacac tttattggtc atggatgggg 1800 agatggtcac tgtaggctaa tattggtaca tgataaacac tttaagtaat cagcccataa 1860 ttgctcacca agaccttaag cctcccaaag tacacaacat tctttgtgtt cttcactaca 1920 catccataga gtctaaggga cgtaaagcct cgttaaagcc agttttgacc agaagcagca 1980 atgagtctat tcctgtgtgt tttccatgtt aatgggacaa aatgatactt tcaaggcatt 2040 gaaaattcat gattaatcaa tcgctagtct gaccccagtg ttatctatgc aggtttgcaa 2100 aacctttagt ttacttaata ctcccttgcc ttcttttgat tcacatccta atgccagcaa 2160 atacttatgt ttttgctatt tcagttccat ttccataaaa tttattttat catcttttct 2220 cataaattta tgccctctat ttttactccc aatctgttta agatgaacaa atcttataag 2280 gccacatagc tgactgttat ttctgttgga ctccaggaag gagaacctaa agaaaagttc 2340 aagtccaagc agaaaccgtg atttcttcca gatgatggct catgagtgcc atttaattgg 2400 ggtgccacct ggtgacctca gcaaatccca gctatattta tgtgttcaca ttacaggatc 2460 attaacccag accgaccact gcacagatct cagaatattt tctatggaga acatacataa 2520 taatgcctga tttcagaaga agaaagtaat tctcaatagc aaggggatgg agtagggtag 2580 acagctgtaa ttaaactcac ttgtgtgata aaaagaaatt aaggaaaaaa gaaaatgaga 2640 gaacatatta ctaaataaag aaagcataca ttaaatattt actatagttt cacactaaga 2700 gaataaagga aatgcaataa agtggcctga aaggtaaagg atgagatgtg taaaggggtg 2760 tagtattttt actatgagca gcaatctgag aagataaagg aatcgagtta cgggcaaaca 2820 tgatgtttga tcagtgttat ttgttttcaa ggcctgccta aatttttttc aaatattaca 2880 aacttttgaa ataacattct ttttgttttt tgctgtctgt tactaggttg cacattttat 2940 aaaggcaggg accatggtat gttgtttgtc tttggattct cagtgattgt tatatttata 3000 tttgttgaag gaaccttaat ccaagacttg gactccaagt atctttccac tctggttcca 3060 aggagggacc ttcctcacag caggcatgct gtgtggtctc acatctcact cctatatctt 3120 tccctgtctg ttactgccct cagtggagcc cacagtgacc atctccccat ccaggacaga 3180 ggccctcaac caccacaacc tgctggtctg ctcggtgaca gatttctatc cagcccagat 3240 caaagtccgg tggtttcgga atggccagga ggagacagct ggcgttgtgt ccacccccct 3300 tattaggaat ggtgactgga ccttccagat cctggtgatg ctggaaatga ctccccagcg 3360 tggagacgtc tacacctgcc acgtggagca ccccagcctc cagagcccca tcaccgtgga 3420 gtggcgtaag gggatattga gtttctgtta ctgtgggccc cacaagacaa aggacagagc 3480 tccttctgac ccatcccttc ccatctctta tccctgatgt cactgctgag ctgggaatca 3540 caggagacta gagcacctct agttccatgg cgagtgcatc agaagaatcc tgatctcatc 3600 acctttccag atgctaggga aattactcta catactgttg ctctggatcc cagtcctgat 3660 tgctctgagg aactgattat tagggctggt gactgggatc ttagggtcta agtttatgga 3720 tgagttcctg aggagtggag atctgcttcc ccactctgtc acctactcac tgtatccaag 3780 tacctattgg ctggcctttc cctcccttag gggtggtctg aatggagaac taggttcctt 3840 tgatgccttc acctcctgca tctcagactg gacttcagct cctcatcagg gaaactatgg 3900 ggtatgggga caaacactga cactcaggct ctgcttctca ggggctcaat ctgaatctgc 3960 ccagagcaag atgctgagtg gcattggagg cttcgtgctg gggctgatct tcctcgggct 4020 gggccttatc atccatcaca ggagtcagaa aggtgaggaa ccccagggga aaaggggaag 4080 atggcctgtg acccagaccc tctgttcaga gaggtcctgt ctctagatgt agctctttcc 4140 tcctgaccct gagaggaaga aagctgagct ggaagtggaa ggagacagga caaggttgga 4200 ggaggcattg gaatctgatt ttactagctg aagggtagcc ctgtcacaga gctgactgat 4260 agagcttatt ccagggcatc cttaccattc atcattgtct cactggctcc tttccaaaaa 4320 cttcctccat taagagggtc agagcctcgg cctccttgcc ttctagtgac aatttccttt 4380 attttagggg attttaaatt agggtgctta aggacttgaa gaacatgaat gggaagagaa 4440 tataactcta attaagtcac atgtgtcatt ttcctttggg gtgagagagt ggctgttcat 4500 gtaatgagac ctttctctgc ataacttcct tttgtaagac ctcaagggcc tccaccagca 4560 g 4561 //