Dbfetch
ID LT575556; SV 1; linear; genomic DNA; STD; HUM; 4201 BP. XX AC LT575556; XX DT 24-MAR-2017 (Rel. 132, Created) DT 24-MAR-2017 (Rel. 132, Last updated, Version 1) XX DE Homo sapiens HLA-DQB1 gene for MHC class II antigen, allele DE HLA-DQB1*03:184, clone AN00128 XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-4201 RA Marsh S.; RT ; RL Submitted (23-MAR-2016) to the INSDC. RL HLA Informatics Group, ANRI, Royal Free Hospital, London, NW3 2QG, UNITED RL KINGDOM. XX RN [2] RA Marsh S.G.E.; RT "Full-length genomic HLA sequences"; RL Unpublished. XX DR MD5; c335b15bda250e66203513ef2b217c1f. XX FH Key Location/Qualifiers FH FT source 1..4201 FT /organism="Homo sapiens" FT /mol_type="genomic DNA" FT /clone="AN00128" FT /db_xref="taxon:9606" FT CDS join(<2788..3069,3585..3695,4178..>4201) FT /codon_start=3 FT /transl_table=1 FT /gene="HLA-DQB1" FT /allele="HLA-DQB1*03:184" FT /product="MHC class II antigen" FT /function="antigen presenting molecule" FT /db_xref="GOA:A0A1W1B5Q0" FT /db_xref="InterPro:IPR003006" FT /db_xref="InterPro:IPR003597" FT /db_xref="InterPro:IPR007110" FT /db_xref="InterPro:IPR013783" FT /db_xref="InterPro:IPR036179" FT /db_xref="UniProtKB/TrEMBL:A0A1W1B5Q0" FT /protein_id="SBL08414.1" FT /translation="EPTVTISPSRTEALNHHNLLVCSVTDFYPAQIKVRWFRNDQEETT FT GVVSTPLIRNGDWTFQILVMLEMTPQRGDVYTCHVEHPSLQNPIIVEWRAQSESAQSKM FT LSGIGGFVLGLIFLGLGLIIHHRSQKGPQGPPPA" FT exon <2788..3069 FT /gene="HLA-DQB1" FT /allele="HLA-DQB1*03:184" FT /number=1 FT intron 3070..3584 FT /gene="HLA-DQB1" FT /allele="HLA-DQB1*03:184" FT /number=1 FT exon 3585..3695 FT /gene="HLA-DQB1" FT /allele="HLA-DQB1*03:184" FT /number=2 FT intron 3696..4177 FT /gene="HLA-DQB1" FT /allele="HLA-DQB1*03:184" FT /number=2 FT exon 4178..>4201 FT /gene="HLA-DQB1" FT /allele="HLA-DQB1*03:184" FT /number=3 XX SQ Sequence 4201 BP; 1098 A; 954 C; 967 G; 1182 T; 0 other; ccagtttaag ggcatgtgct acttcaccaa cgggacggag cgcgtgcgtc ttgtgaccag 60 atacatctat aaccgagagg agtacgcacg cttcgacagc gacgtggagg tgtaccgggc 120 ggtgacgccg ctggggccgc ctgccgccga gtactggaac agccagaagg aagtcctgga 180 gaggacccgg gcggagttgg acacggtgtg cagacacaac taccagttgg agctccgcac 240 gaccttgcag cggcgaggtg agcgtcgtcg cccgtctgcg aggcccatcc ttggcagggg 300 cccagagtct ctgcgccagg aggggcgaag ggggcgcggc ctctggaacc tgagccttgt 360 tcgttccacc ccggctgaca ggaggaggcg gtgggggtgc tgggggctgg tgcatcggag 420 gggcagggac ctagggcaga gcagggggac aggcagagtt ggtcaagctg cctagtttcg 480 ccccatcctc cccgtccgtc ggcctcgccc tctgctctgc acgttcttgc ctcgtgcctt 540 atgcgtttgc ctcctcgtgc cttaccttta ctaagcagtt ctctctgccc ccaatttccg 600 ccctcttccc ctgcccgccc gcccggctag cactgccgca cccggcaagg tccacctaca 660 cagctcatgc agtgggaagc ttcagacttg gcctgatgga gttagggctg ccccacaact 720 gcgcgcaggg catccagcaa ttacagttgt caaataagat attttgactt ttgacttcaa 780 attattattc atcgtaattc tgttttctta aatggctctc attcatggcg gagctctttg 840 agatgagagt gttttaatca ttgcatgcct ggtatctgac acattgactg gcatgtggta 900 tgagctcaat gatcttctgt taaattaatg aataaatgtg ctcagctgcc aatccactta 960 ggctcaaggg aaagcagagg ataaatagag ccttaaaaat ggacttttat taattatttt 1020 ctgtcatttt gcttaattct ttaaagtaaa ctcttattga cttggatctt aatagagttt 1080 gtgaatacaa agtctgagga aaaaagtgtt tgctaaaaat aaaaacaaca cttgaatgat 1140 gtttgtaagg cagttttaat ttcttagaaa agctgaacaa atggcacaat gcaaagagca 1200 gaagttttgg aataaataga ttgaagcaat taaattattg gataaaaata gtttcaggtt 1260 gcttttggct taggttctcc cctcccccca tcactatcca cttcaggaat aaacattctg 1320 aaagtcaatt ttacccattt agtgagcact tatttctaga cagttacctt atcaaatacc 1380 gtctatgtta cgtcatttaa tctcacagtt gcctgtgcat tagagattag catcaccact 1440 ttatatatcc taatattagt acatgacaaa cactttaagt aatcagccca caagtactca 1500 ccaagacctt aagcctccca aagtacacaa tattctttat gttcttcact acacatctat 1560 agagtcaaag ggacataaag ccttgttaaa gccagttttg actagaagca gcaatgagtc 1620 tcttcctgtt tgatctccat gttaatggga caaaatgata ctttcaaggc attgaaaatt 1680 tatgattaat caatccctag tctgactcca gtgttaccta tgcagattca caaaactttt 1740 agtttacttt aaactccctt gccttctttt gactcacatc gtagtgccag caagtactta 1800 catttttgct attttggttc tatttccata aaatttattt tatcatcttt tctcataagt 1860 ttgtgccctc tattttactc ccagtctgtg taagatgaac aaatcttata aggccacata 1920 gctgactgtg atttcaggtg gactccagga aggagaacca aagaaaagtt caagtccaag 1980 cagaaaccgt gattccttcc ggatgatggc tcaagagtgc cttttaattg gggtgcaacc 2040 tgctgacctc agcaaatctc agctatattt atatgttcac attacaggct cattaaccta 2100 ggctgatctc tgcaaggatc tcagaatatt ttctacagat aacatacatg ataatatctg 2160 atttcaggac aaaaaagtaa ttctcaatag caagggaatg gagtagggta gacagctagt 2220 aattaaactc acttgtatgt taaaaataaa ttaaggaaaa aaagaaaatg agagaacata 2280 ttactaaata aagaaagcat acattaaata tttactatag tttcacacta agagaataaa 2340 ggaaatgcaa taaagtggcc tgaaagataa aggatgagac gtgtaaagag acagggaaag 2400 atgtgtcatt tttttactat gagcagcagt ctgagaagat aaaggaatcg agttatgggc 2460 aaacatgatg tttgatcagt gttatttgtt ttgaaggcct gcctactttt gtttcaaata 2520 ttacagactt ttgaaatcac attctttttg ttttttgctg tctgttacta gatcgcacat 2580 tctgtaaagg cagggaccat ggtatgttgt ttatctttgg attctcagtg attgtcatat 2640 ttatatttgt tgaatgaatc ttaatccaag acttggactc caggtatctt tccactctgg 2700 ttccaaggag ggaccattcc caatggtaga cgtgctgtgt ggtctcacat ctcactcctg 2760 tcttttcctg tctgttactg ccctcagtgg agcccacagt gaccatctcc ccatccagga 2820 cagaggccct caaccaccac aacctgctgg tctgctcagt gacagatttc tatccagccc 2880 agatcaaagt ccggtggttt cggaatgacc aggaggagac aactggcgtt gtgtccaccc 2940 cccttattag gaacggtgac tggaccttcc agatcctggt gatgctggaa atgactcccc 3000 agcgtggaga cgtctacacc tgccacgtgg agcaccccag cctccagaac cccatcatcg 3060 tggagtggcg taaggggata ttgagtttct gttactatgg gccccacaag acaaagggca 3120 gagctccttc tgacccattc cttcccatct cttatccctg atgtcactac tgagctgggg 3180 atcacaggag actagagcac ctcttgctcc atggcaagtg catcagaaga atcctgatct 3240 catcaccttt ccagatgcta gggaaattat tctacgtact gtttctccag atcccagtcc 3300 tgatagctcg gagggactta ttattagggc tggtgactgg gatcttaggg tttaaggtat 3360 ggatgagttc ctgaggagtg gagatctgct tccccgctct ctcacctact cactataccg 3420 aaggacctat tggctggctt tcccctccct taggggtggt ctgaatggag gactaggttc 3480 ctttgacact ttcacctcct gcatctcaga ctggacttca gctcctcagc agggatgcta 3540 tggggtgtag ggacaaacgc tgacactcag gctctgcttc ttaggggctc agtctgaatc 3600 tgcccagagc aagatgctga gtggcattgg aggcttcgtg ctggggctga tcttcctcgg 3660 gctgggcctt attatccatc acaggagtca gaaaggtgag gaaccccaag ggaaaagggg 3720 aagatgggct gtgacccaga ccctctgttc agggaggtcc tgtctctaga tgtggctctt 3780 tcctcctgac cctgagagga agaaaactga gctggaggtg ggaggagaca ggacaagatt 3840 ggaggaggca ttggaatctg attttactag ttgaaaggta gccctgtcac acaggtgact 3900 gatagagctt attccaggat atacttacca ttcatcatct cattggctcc tttccaaaag 3960 cttcctccat taagagggtc agagccttgg cctccttgcc ttctagtgac aattttcttt 4020 gttttagggg attttaaatt agggtactta aggccttgaa gaacatgagt ggtaagagaa 4080 tataactcta attaagtcac atgtgtcatt ttcctttggg gtgaaagagt ggctgtttgt 4140 gtaatgagac ctttctctgc ataacttcct tttgtaagac ctcaagggcc tccaccagca 4200 g 4201 //