Dbfetch
ID LT549454; SV 1; linear; genomic DNA; STD; HUM; 3340 BP. XX AC LT549454; XX DT 08-MAY-2016 (Rel. 128, Created) DT 08-MAY-2016 (Rel. 128, Last updated, Version 1) XX DE Homo sapiens HLA-B gene for MHC class I antigen, allele HLA-B*18:01:01:02 XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-3340 RA Peixoto M.; RT ; RL Submitted (08-MAR-2016) to the INSDC. RL Imunogenetica, IPST, Roa Dr. Roberto Frias, 4200-467 , Oporto, PORTUGAL. XX RN [2] RA Peixoto M., Oliveira S., Ferreira R., Teixeira J., Dias M.; RT "Extension of HLA-B*18:01:0102"; RL Unpublished. XX DR MD5; caae922e71de7936cb0cb31658d8c1e9. DR IMGT/HLA; HLA-B*18:01:01:04; HLA14962. XX FH Key Location/Qualifiers FH FT source 1..3340 FT /organism="Homo sapiens" FT /mol_type="genomic DNA" FT /db_xref="taxon:9606" FT CDS join(302..374,503..772,1019..1294,1867..2142,2247..2363, FT 2805..>2837) FT /codon_start=1 FT /transl_table=1 FT /gene="HLA-B" FT /allele="HLA-B*18:01:01:02" FT /product="MHC class I antigen" FT /function="antigen presenting molecule" FT /db_xref="GOA:A0A167RQK8" FT /db_xref="InterPro:IPR001039" FT /db_xref="InterPro:IPR003006" FT /db_xref="InterPro:IPR003597" FT /db_xref="InterPro:IPR007110" FT /db_xref="InterPro:IPR011161" FT /db_xref="InterPro:IPR011162" FT /db_xref="InterPro:IPR013783" FT /db_xref="InterPro:IPR036179" FT /db_xref="InterPro:IPR037055" FT /db_xref="UniProtKB/TrEMBL:A0A167RQK8" FT /protein_id="SAI83281.1" FT /translation="MRVTAPRTLLLLLWGAVALTETWAGSHSMRYFHTSVSRPGRGEPR FT FISVGYVDGTQFVRFDSDAASPRTEPRAPWIEQEGPEYWDRNTQISKTNTQTYRESLRN FT LRGYYNQSEAGSHTLQRMYGCDVGPDGRLLRGHDQSAYDGKDYIALNEDLSSWTAADTA FT AQITQRKWEAARVAEQLRAYLEGTCVEWLRRHLENGKETLQRADPPKTHVTHHPISDHE FT ATLRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDRTFQKWAAVVVPSGEEQRY FT TCHVQHEGLPKPLTLRWEPSSQSTIPIVGIVAGLAVLAVVVIGAVVATVMCRRKSSGGK FT GGSYSQAA" FT exon 302..374 FT /gene="HLA-B" FT /allele="HLA-B*18:01:01:02" FT /number=1 FT intron 375..502 FT /gene="HLA-B" FT /number=1 FT exon 503..772 FT /gene="HLA-B" FT /allele="HLA-B*18:01:01:02" FT /number=2 FT intron 773..1018 FT /gene="HLA-B" FT /number=2 FT exon 1019..1294 FT /gene="HLA-B" FT /allele="HLA-B*18:01:01:02" FT /number=3 FT intron 1295..1866 FT /gene="HLA-B" FT /number=3 FT exon 1867..2142 FT /gene="HLA-B" FT /allele="HLA-B*18:01:01:02" FT /number=4 FT intron 2143..2246 FT /gene="HLA-B" FT /number=4 FT exon 2247..2363 FT /gene="HLA-B" FT /allele="HLA-B*18:01:01:02" FT /number=5 FT intron 2364..2804 FT /gene="HLA-B" FT /number=5 FT exon 2805..2837 FT /gene="HLA-B" FT /allele="HLA-B*18:01:01:02" FT /number=6 FT intron 2838..2943 FT /gene="HLA-B" FT /number=6 XX SQ Sequence 3340 BP; 621 A; 978 C; 1050 G; 691 T; 0 other; tggtgtagga gaagagggat caggacgaag tcccaggccc cgggcggggc tctcagggtc 60 tcaggctccg agagccttgt ctgcattggg gaggcgcagc attggggatt ccccactccc 120 acgagtttca cttcttctcc caacctatgt cgggtccttc ttccaggata ctcgtgacgc 180 gtccccattt cccactccca ttgggtgttg ggtgtctaga gaagccaatc agtgtcgccg 240 gggtcccagt tctaaagtcc ccacgcaccc acccggactc agaatctcct cagacgccga 300 gatgcgggtc acggcgcccc gaaccctcct cctgctgctc tggggggcag tggccctgac 360 cgagacctgg gctggtgagt gcggggtcgg cagggaaatg gcctctgtgg ggaggagcga 420 ggggaccgca ggcgggggcg caggacccgg ggagccgcgc cgggaggagg gtcgggcggg 480 tctcagcccc tccttgcccc aggctcccac tccatgaggt atttccacac ctccgtgtcc 540 cggcccggcc gcggggagcc ccgcttcatc tcagtgggct acgtggacgg cacccagttc 600 gtgaggttcg acagcgacgc cgcgagtccg aggacggagc cccgggcgcc gtggatagag 660 caagaggggc cggagtattg ggaccggaac acacagatct ccaagaccaa cacacagact 720 taccgagaga gcctgcggaa cctgcgcggc tactacaacc agagcgaggc cggtgagtga 780 ccccggcccg gggcgcaggt cacgactccc catcccccac gtacggcccg ggtcgccccg 840 agtctccggg tccgagatcc gcccccctga ggccgcggga cccgcccaga ccctcgaccg 900 gcgagagccc caggcgcgtt tacccggttt cattttcagt tgaggccaaa atccccgcgg 960 gttggtcggg gcggggcggg gctcgggggg acggggctga ccgcggggcc ggggccaggg 1020 tctcacaccc tccagaggat gtacggctgc gacgtggggc cggacgggcg cctcctccgc 1080 gggcatgacc agtccgccta cgacggcaag gattacatcg ccctgaacga ggacctgagc 1140 tcctggaccg cggcggacac cgcggctcag atcacccagc gcaagtggga ggcggcccgt 1200 gtggcggagc agctgagagc ctacctggag ggcacgtgcg tggagtggct ccgcagacac 1260 ctggagaacg ggaaggagac gctgcagcgc gcgggtacca ggggcagtgg ggagccttcc 1320 ccatctccta taggtcgccg gggatggcct cccacgagaa gaggaggaaa atgggatcag 1380 cgctagaatg tcgccctccc ttgaatggag aatggcatga gttttcccga gtttcctctg 1440 agggccccct cttctctcta ggacaattaa gggatgacgt ctctgaggaa atggagggga 1500 agacagtccc tagaatactg atcaggggtc ccctttgacc cctgcagcag ccttgggaac 1560 catgactttt cctctcaggc cttgttctct gcctcacact cagtgtgttt ggggctctga 1620 ttccagcact tctgagtcac tttacctcca ctcagatcag gagcagaagt ctctgttccc 1680 cgctcagaga ctcgaacttt ccaatgaata gattatccca ggtgcctgcg tccaggctgg 1740 tgtctgggtt ctgtgcccct tccccacccc aggtgtcctg tccattctca ggctggtcac 1800 atgggtggtc ctagggtgtc ccatgagaga tgcaaagcgc ctgaattttc tgactcttcc 1860 catcagaccc cccaaagaca catgtgaccc accaccccat ctctgaccat gaggccaccc 1920 tgaggtgctg ggccctgggc ttctaccctg cggagatcac actgacctgg cagcgggatg 1980 gcgaggacca aactcaggac accgagcttg tggagaccag accagcagga gatagaacct 2040 tccagaagtg ggcagctgtg gtggtgcctt ctggagaaga gcagagatac acatgccatg 2100 tacagcatga ggggctgccg aagcccctca ccctgagatg gggtaaggag ggggatgagg 2160 ggtcatatct cttctcaggg aaagcaggag cccttctgga gcccttcagc agggtcaggg 2220 cccctcatct tcccctcctt tcccagagcc atcttcccag tccaccatcc ccatcgtggg 2280 cattgttgct ggcctggctg tcctagcagt tgtggtcatc ggagctgtgg tcgctactgt 2340 gatgtgtagg aggaagagct caggtaggga aggggtgagg ggtggggtct gggttttctt 2400 gtcccactgg gggtttcaag ccccaggtag aagtgttccc tgcctcatta ctgggaagca 2460 gcatccacac aggggctaac gcagcctggg accctgtgtg ccagcactta ctcttttgtg 2520 cagcacatgt gacaatgaag gacggatgta tcaccttgat ggttgtggtg ttggggtcct 2580 gattccagca ttcatgagtc aggggaaggt ccctgctaag gacagacctt aggagggcag 2640 ttggtccagg acccacactt gctttcctcg tgtttcctga tcctgccttg ggtctgtagt 2700 catacttctg gaaattcctt ttggttccaa gacgaggagg ttcctctaag atctcatggc 2760 cctgcttcct cccagtcccc tcacaggaca ttttcttccc acaggtggaa aaggagggag 2820 ctactctcag gctgcgtgta agtggtgggg gtgggagtgt ggaggagctc acccacccca 2880 taattcctcc tgtcccacgt ctcctgcggg ctctgaccag gtcctgtttt tgttctactc 2940 cagccagcga cagtgcccag ggctctgatg tgtctctcac agcttgaaaa ggtgagattc 3000 ttggggtcta gagtgggcgg gggggcgggg agggggcaga ggggaaaggc ctgggtaatg 3060 gagattcttt gattgggatg tttcgcgtgt gtggtgggct gttcagagtg tcatcactta 3120 ccatgactaa ccagaatttg ttcatgactg ttgttttctg tagcctgaga cagctgtctt 3180 gtgagggacc gagatgcagg atttcttcac gcctcccctt tgtgacttca agagcctctg 3240 gcatctcttt ctgcaaaggc acctgaatgt gtctgcgtcc ctgttagcat aatgtgagga 3300 ggtggagaga cagcccaccc ccgtgtccac cgtgacccct 3340 //