Dbfetch

ID   LS999228; SV 1; linear; genomic DNA; STD; HUM; 3868 BP.
XX
AC   LS999228;
XX
PR   Project:PRJEB28498;
XX
DT   23-JUL-2020 (Rel. 144, Created)
DT   23-JUL-2020 (Rel. 144, Last updated, Version 1)
XX
DE   Homo sapiens, HLA-B gene for MHC class I antigen, cell line
DE   DKMS-LSL-B-3081, allele HLA-B*49:new
XX
KW   .
XX
OS   Homo sapiens (human)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae;
OC   Homo.
XX
RN   [1]
RA   Albrecht V., Albrecht V.;
RT   ;
RL   Submitted (11-SEP-2018) to the INSDC.
RL   DKMS LIFE SCIENCE LAB, Quality & Service, Advanced Projects, Tatzberg 47 ,
RL   Saxony, 01307 Dresden, Germany
XX
DR   MD5; 4688dac06f79d36cfa9265fd9900772e.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..3868
FT                   /organism="Homo sapiens"
FT                   /mol_type="genomic DNA"
FT                   /cell_line="DKMS-LSL-B-3081"
FT                   /db_xref="taxon:9606"
FT   exon            1..357
FT                   /gene="HLA-B"
FT                   /allele="HLA-B*49:new"
FT                   /number=1
FT   CDS             join(285..357,486..755,1006..1281,1857..2132,2237..2353,
FT                   2795..2827,2934..2977)
FT                   /codon_start=1
FT                   /transl_table=1
FT                   /gene="HLA-B"
FT                   /allele="HLA-B*49:new"
FT                   /product="MHC class I antigen"
FT                   /function="antigen presenting molecule"
FT                   /protein_id="VAV80950.1"
FT                   /translation="MRVTAPRTVLLLLSAALALTETWAGSHSMRYFHTAMSRPGRGEPR
FT                   FITVGYVDDTLFVRFDSDATSPRKEPRAPWIEQEGPEYWDRETQISKTNTQTYRENLRI
FT                   ALRYYNQSEAGSHTWQRMYGCDLGPDGRLLRGYNQLAYDGKDYIALNEDLSSWTAADTA
FT                   AQITQRKWEAAREAEQLRAYLEGLCVEWLRRYLENGKETLQRADPPKTHVTHHPISDHE
FT                   ATLRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDRTFQKWAAVVVPSGEEQRY
FT                   TCHVQHEGLPKPLTLRWEPSSQSTIPIVGIVAGLAVLAVVVIGAVVATVMCRRKSSGGK
FT                   GGSYSQAASSDSAQGSDVSLTA"
FT   intron          358..485
FT                   /gene="HLA-B"
FT                   /allele="HLA-B*49:new"
FT                   /number=1
FT   exon            486..755
FT                   /gene="HLA-B"
FT                   /allele="HLA-B*49:new"
FT                   /number=2
FT   intron          756..1005
FT                   /gene="HLA-B"
FT                   /allele="HLA-B*49:new"
FT                   /number=2
FT   exon            1006..1281
FT                   /gene="HLA-B"
FT                   /allele="HLA-B*49:new"
FT                   /number=3
FT   intron          1282..1856
FT                   /gene="HLA-B"
FT                   /allele="HLA-B*49:new"
FT                   /number=3
FT   exon            1857..2132
FT                   /gene="HLA-B"
FT                   /allele="HLA-B*49:new"
FT                   /number=4
FT   intron          2133..2236
FT                   /gene="HLA-B"
FT                   /allele="HLA-B*49:new"
FT                   /number=4
FT   exon            2237..2353
FT                   /gene="HLA-B"
FT                   /allele="HLA-B*49:new"
FT                   /number=5
FT   intron          2354..2794
FT                   /gene="HLA-B"
FT                   /allele="HLA-B*49:new"
FT                   /number=5
FT   exon            2795..2827
FT                   /gene="HLA-B"
FT                   /allele="HLA-B*49:new"
FT                   /number=6
FT   intron          2828..2933
FT                   /gene="HLA-B"
FT                   /allele="HLA-B*49:new"
FT                   /number=6
FT   exon            2934..3868
FT                   /gene="HLA-B"
FT                   /allele="HLA-B*49:new"
FT                   /number=7
XX
SQ   Sequence 3868 BP; 730 A; 1093 C; 1187 G; 858 T; 0 other;
     gatcaggacg aagtcccagg ccccgggcgg ggctctcagg gtctcaggct ccgagggccg        60
     cgtctgcaat ggggaggcgc agcgttgggg attccccact cccacgagtt tcacttcttc       120
     tcccaaccta tgtcgggtcc ttcttccagg atactcgtga cgcgtcccca tttcccactc       180
     ccattgggtg tcgggtgtct agagaagcca atcagcgtcg ccgtggtccc agttctaaag       240
     tccccacgca cccacccgga ctcagaatct cctcagacgc cgagatgcgg gtcacggcac       300
     cccgaaccgt cctcctgctg ctctcggcgg ccctggccct gaccgagacc tgggccggtg       360
     agtgcgggtc ggcagggaaa tggcctctgt ggggaggagc gaggggaccg caggcggggg       420
     cgcaggaccc ggggagccgc gccgggagga gggtcgggcg ggtctcagcc cctcctcgcc       480
     cccaggctcc cactccatga ggtatttcca caccgccatg tcccggcccg gccgcgggga       540
     gccccgcttc atcaccgtgg gctacgtgga cgacacgctg ttcgtgaggt tcgacagcga       600
     cgccacgagt ccgaggaagg agccgcgggc gccatggata gagcaggagg ggccggagta       660
     ttgggaccgg gagacacaga tctccaagac caacacacag acttaccgag agaacctgcg       720
     gatcgcgctc cgctactaca accagagcga ggccggtgag tgaccccggc ccggggcgca       780
     ggtcacgact ccccatcccc cacgtacggc ccgggtcgcc ccgagtctcc gggtccgaga       840
     tccgcccccc tgaggccgcg ggacccgccc agaccctcga ccggcgagag ccccaggcgc       900
     gtttacccgg tttcattttc agttgaggcc aaaatccccg cgggttggtc ggggcggggc       960
     ggggcggggc tcgggggacg gggctgaccg cggggcctgg gccagggtct cacacttggc      1020
     agaggatgta tggctgcgac ctggggcccg acgggcgcct cctccgcggg tataaccagt      1080
     tagcctacga cggcaaggat tacatcgccc tgaacgagga cctgagctcc tggaccgcgg      1140
     cggacaccgc ggctcagatc acccagcgca agtgggaggc ggcccgtgag gcggagcagc      1200
     tgagagccta cctggagggc ctgtgtgtgg agtggctccg cagatacctg gagaacggga      1260
     aggagacgct gcagcgcgcg ggtaccaggg gcagtgggga gccttcccca tctcctatag      1320
     gtcgccgggg atggcctccc acgagaagag gaggaaaatg ggatcagcgc tagaatgtcg      1380
     ccctcccttg aatggagaat ggcatgagtt ttcctgagtt tcctctgagg gccccctctt      1440
     ctctctagga caattaaggg atgacgtctc tgaggaaatg gaggggaaga cagtccctag      1500
     aatactgatc aggggtcccc tttgacccct gcagcagcct tgggaaccgt gacttttcct      1560
     ctcaggcctt gttctctgcc tcacactcag tgtgtttggg gctctgattc cagcacttct      1620
     gagtcacttt acctccactc agatcaggag cagaagtccc tgttccccac tcagagactc      1680
     gaactttcca atgaatagga gattatccca ggtgcctgcg tccaggctgg tgtctgggtt      1740
     ctgtgcccct tccccacccc aggtgtcctg tccattctca ggctggtcac atgggtggtc      1800
     ctagggtgtc ccatgagaga tgcaaagcgc ctgaattttc tgactcttcc catcagaccc      1860
     cccaaagaca catgtgaccc accaccccat ctctgaccat gaggccaccc tgaggtgctg      1920
     ggccctgggc ttctaccctg cggagatcac actgacctgg cagcgggatg gcgaggacca      1980
     aactcaggac accgagcttg tggagaccag accagcagga gatagaacct tccagaagtg      2040
     ggcagctgtg gtggtgcctt ctggagaaga gcagagatac acatgccatg tacagcatga      2100
     ggggctgccg aagcccctca ccctgagatg gggtaaggag ggggatgagg ggtcatatct      2160
     gttctcaggg aaagcaggag cccttctgga gcccttcagc agggtcaggg cccctcatct      2220
     tcccctcctt tcccagagcc atcttcccag tccaccatcc ccatcgtggg cattgttgct      2280
     ggcctggctg tcctagcagt tgtggtcatc ggagctgtgg tcgctactgt gatgtgtagg      2340
     aggaagagct caggtaggga aggggtgagg ggtggggtct gggttttctt gtcccactgg      2400
     gggtttcaag ccccaggtag aagtgttccc tgcctcatta ctgggaagca gcatccacac      2460
     aggggctaac gcagcctggg accctgtgtg ccagcactta ctcttttgtg cagcacatgt      2520
     gacaatgaag gacggatgta tcgccttgat ggttgtggtg ttggggtcct gattccagca      2580
     ttcatgagtc aggggaaggt ccctgctaag gacagacctt aggagggcag ttggtccagg      2640
     acccacactt gctttcctcg tgtttcctga tcctgccttg ggtctgtagt catacttctg      2700
     gaaattcctt ttggttccaa gacgaggagg ttcctctaag atctcatggc cctgcttcct      2760
     cccagtcccc tcacaggaca ttttcttccc acaggtggaa aaggagggag ctactctcag      2820
     gctgcgtgta agtggtgggg gtgggagtgt ggaggagctc acccacccca taattcctcc      2880
     tgtcccacgt ctcctgaggg ctctgaccag gtcctgtttt tgttctactc cagccagcga      2940
     cagtgcccag ggctctgatg tgtctctcac agcttgaaaa ggtgagattc ttggggtcta      3000
     gagtgggtgg ggtggcgggt ctgggggtgg gtggggcagt ggggaaaggc ctgggtaatg      3060
     gagattcttt gattgggatg tttcgcgtgt gtggtgggct gttcagagtg tcatcactta      3120
     ccatgactaa ccagaatttg ttcatgactg ttgttttctg tagcctgaga cagctgtctt      3180
     gtgagggact gagatgcagg atttcttcac gcctcccctt tgtgacttca agagcctctg      3240
     gcatctcttt ctgcaaaggc acctgaatgt gtctgcgtcc ctgttagcat aatgtgagga      3300
     ggtggagaga cagcccaccc ttgtgtccac tgtgacccct gttcccatgc tgacctgtgt      3360
     ttcctcccca gtcatctttc ttgttccaga gaggtggggc tggatgtctc catctctgtc      3420
     tcaactttac gtgcactgag ctgcaacttc ttacttccct actgaaaata agaatctgaa      3480
     tataaatttg ttttctcaaa tatttgctat gagaggttga tggattaatt aaataagtca      3540
     attcctggaa tttgagagag caaataaaga cctgagaacc ttccagaatc tgcatgttcg      3600
     ctgtgctgag tctgttgcag gtggggtgtg gagaaggctg tggggggccg agtgtggatg      3660
     gggcctgtgc ccatttggtg ttgagtccat catgggcttt atgtggttag tcgtcagctg      3720
     ggtcaccttc actgctccat tgtccttgtc ccttcagtgg aaacttgtcc agtgggagct      3780
     gtgaccacag aggctcacac atcgcccagg gcggcccctg cacacggggg tctctgtgca      3840
     ttctgagaca aattttcaga gccattca                                         3868
//