Dbfetch

ID   LR828235; SV 1; linear; genomic DNA; STD; HUM; 10776 BP.
XX
AC   LR828235;
XX
PR   Project:PRJEB39113;
XX
DT   23-JUL-2020 (Rel. 144, Created)
DT   23-JUL-2020 (Rel. 144, Last updated, Version 1)
XX
DE   Homo sapiens, HLA-DRB1 gene for MHC class II antigen, cell line
DE   DKMS-LSL_ID16237081_DRB1_3, allele HLA-DRB1*15:new
XX
KW   .
XX
OS   Homo sapiens (human)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae;
OC   Homo.
XX
RN   [1]
RA   Albrecht V., Schmidt H. A., Klussmeier A., Lange V., Putke K.;
RT   ;
RL   Submitted (29-JUN-2020) to the INSDC.
RL   DKMS LIFE SCIENCE LAB, Research & Development, St. Petersburger Str. 2,
RL   Saxony, 01069 Dresden, Germany
XX
DR   MD5; 2943b72e64d690a72bc6e835d1597e52.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..10776
FT                   /organism="Homo sapiens"
FT                   /mol_type="genomic DNA"
FT                   /cell_line="DKMS-LSL_ID16237081_DRB1_3"
FT                   /db_xref="taxon:9606"
FT   exon            1..151
FT                   /gene="HLA-DRB1"
FT                   /allele="HLA-DRB1*15:new"
FT                   /number=1
FT   CDS             join(52..151,5416..5685,7954..8235,8936..9046,9522..9545,
FT                   10688..10701)
FT                   /codon_start=1
FT                   /transl_table=1
FT                   /gene="HLA-DRB1"
FT                   /allele="HLA-DRB1*15:new"
FT                   /product="MHC class II antigen"
FT                   /function="antigen presenting molecule"
FT                   /protein_id="CAD0297765.1"
FT                   /translation="MVCLKLPGGSCMTALTVTLMVLSSPLALSGDTRPRFLWQPKRECH
FT                   FFNGTERVRFLDRYFYNQEESVRFDSDVGEFRAVTELGRPDAEYWNSQKDILEQARAAV
FT                   DTYCRHNYGVVESFTVQRRVQPKVTVYPSKTQPLQHHNLLVCSVSGFYPGSIEVRWFLN
FT                   GQEEKAGMVSTGLIQNGDWTFQTLVMLETVPRSGEVYTCQVEHPSVTSPLTVEWRARSE
FT                   SAQSKMLSGVGGFVLGLLFLGAGLFIYFRNQKGHSGLQPTGFLS"
FT   intron          152..5415
FT                   /gene="HLA-DRB1"
FT                   /allele="HLA-DRB1*15:new"
FT                   /number=1
FT   exon            5416..5685
FT                   /gene="HLA-DRB1"
FT                   /allele="HLA-DRB1*15:new"
FT                   /number=2
FT   intron          5686..7953
FT                   /gene="HLA-DRB1"
FT                   /allele="HLA-DRB1*15:new"
FT                   /number=2
FT   exon            7954..8235
FT                   /gene="HLA-DRB1"
FT                   /allele="HLA-DRB1*15:new"
FT                   /number=3
FT   intron          8236..8935
FT                   /gene="HLA-DRB1"
FT                   /allele="HLA-DRB1*15:new"
FT                   /number=3
FT   exon            8936..9046
FT                   /gene="HLA-DRB1"
FT                   /allele="HLA-DRB1*15:new"
FT                   /number=4
FT   intron          9047..9521
FT                   /gene="HLA-DRB1"
FT                   /allele="HLA-DRB1*15:new"
FT                   /number=4
FT   exon            9522..9545
FT                   /gene="HLA-DRB1"
FT                   /allele="HLA-DRB1*15:new"
FT                   /number=5
FT   intron          9546..10687
FT                   /gene="HLA-DRB1"
FT                   /allele="HLA-DRB1*15:new"
FT                   /number=5
FT   exon            10688..10776
FT                   /gene="HLA-DRB1"
FT                   /allele="HLA-DRB1*15:new"
FT                   /number=6
XX
SQ   Sequence 10776 BP; 2822 A; 2157 C; 2614 G; 3183 T; 0 other;
     gagtgagact tgcctgcttc tctggcccct ggtcctgtcc tgttctccag catggtgtgt        60
     ctgaagctcc ctggaggctc ctgcatgaca gcgctgacag tgacactgat ggtgctgagc       120
     tccccactgg ctttgtctgg ggacacccga cgtaagtgca cattgcgggt gctgagctac       180
     tatggggtgg ggaaaatagg gagttttgtt aacattgtgc ccaggccatg tcccttaaga       240
     aattgtgacg ttttcttcag agattgccca tctttatcat tggatcccaa attatttcct       300
     ccataaaagg agcttgggta cttgccctct tcatgagact tgtgtaaggg gcctttgcac       360
     aaatcatttc ttttcaaatc tccaccaata aaacctttgc atcacatgtc ctcagggtct       420
     ttagaggatt tagaaataag gattctaaaa taaattcccc atacagcact tccctttatt       480
     atgttgactt atgtcagaca aaaggaggtt cttactgaaa attttgtggg agtcaaggga       540
     attcaaaggg tctctcctag acgatccagt gttaggttcc ccacaggacc tttggtgttg       600
     gccatagtcc tcatatgtga ggatggaccc agtggcctcc ccattatctc ctttcttttc       660
     ttgctgaact ccaatgttta taaggcctgt atccctgtag tgtatgtagg ttctctgaca       720
     gaagttatac ttagtgctct tcctttcttg tggggaaaag tccctggaac tgaagctgag       780
     attgttaata cttggagtca ccttacagat acagagcatt tatgaggtat tctttggtgc       840
     ctaaagaact taaggcatcc tctgaaaaac tagcccaggt tcgtgttcat tatgaatctt       900
     ttttaacctt tctgtacttg tttctcttgc atctcctatg tgctctaact agacatgaca       960
     gaagagattt aactaatgta taaattatat gaaattctat tttttaagtc aaaaataatc      1020
     aactatcaga aatttaataa tgttcaaact atatactctg tgtggggtta ccgagatgat      1080
     gtgaacattg ttcacgtctc atagggctga aagtcaatgg gcaagtcttg ggaactcatt      1140
     gtcttactgg ggtcttgtcc taaatttcct aggttcaccc atcatgccct cagctttcct      1200
     taactagcca tgtctgctta cctcttcctc cagtttctat ttttccccag ctatgttgtc      1260
     atcatttcca gaaatctcta aagcttgcac agaaccttag cactatgaga ttcattgaaa      1320
     gagacttttt ttctcttttt gaggtagggc ctggctctgt cacccagtct atagctcagt      1380
     ggtgtgatcg aggctcactg caacctctgc cacttatgct caagtgatcc tccctcctca      1440
     ggctccagag tagctgggaa tacaggcagg caaccacgcc cagctaattt ttgtaatttt      1500
     ggtagacatg agattttgcc atgttgccca ggctggtctt gaactgctgg actcaagcaa      1560
     tcctcctgcc ttggcctccc aacatgctag gattatagat gtgagacact gtgcccaggc      1620
     aaaagagatg actcttaata aaaaaatttc ctttttctta aatcactgtt tctttatctg      1680
     tgaattcttc ttccaactag aaggaggaga aaaaagaagt ttgcctgtat ttatcactgg      1740
     gaggagaagg ggtctagtgt gacattaaaa tgaaagagtg ctggagcttg agccccttct      1800
     tgctttccag gatccctaca gtgatcagtt cccataccct ggtttattca tgtaaaccac      1860
     acttattttt ctcagcagct actctttact gggctccatt ctaggttcaa atcattctat      1920
     ttgattaagt tagagagcgt ccctactctc atggaagtta cacaagagta gaggagacag      1980
     acactaaccc aataagcatt taacaaagaa gataatgtta gagagtcata gtgcactgaa      2040
     gaaaagacat caggtttgtg aaaaagagag acatggattc acctacttta gttcatatgt      2100
     tagggagctc cacctgagaa agtgacattc agctgagaca acaaaataag tagacagtcg      2160
     tgaagatcta agggatgaaa gttccaggga gaccgaatcg ggggaaagcc ctgatgtgtt      2220
     aaattatgtg gagggagaga aagaaagcta gaggggctga tgtatagaaa gcaaggaaat      2280
     ggagaggcag aagatgaggg taggacacag agaggaattc aggagcctca tcattatagg      2340
     ctctgatgtc cacagtaaaa aaaaattaaa ttttattatt tatttatttg tttgtttatt      2400
     ttattttatt ttgtgatgga gtctctctct gttgcccagg ctagattgct gtggcacaat      2460
     ctcggctcac tgcaacctcc gcctcctggg ttcaagcgat tctcctgcct cagcctcccg      2520
     attagctggg gccacaggcg catgccacca cacctggcta attttttgta tttttagtag      2580
     ggatagggtt tcaccgtgtt agccaggatg gtctcgatct cctgacctcg tgatccgccc      2640
     gccttggcct cccaaagtgc tgggattaca ggcgtgagcc actgcgcccg gcctatattc      2700
     aatgtttaaa actaattcta gctactctgt ggggattgga ttgttggggt tcactagtgg      2760
     ttaggaagac tatttaggag cacagcaggg aattcttcag ggaaaacagg tttgtggctt      2820
     catggagtgc attagtgata aagatggtga aaaagataaa gtggacagac ttggcatgta      2880
     tttttgctta gcttgttaat gaattactgt aaagggggta gaacaatcaa gcttattcct      2940
     aaggattttc ttttgacaaa taaatgggtg gtagtgttgt ttattgagat aggaaaaact      3000
     atgggaggaa atgatttgaa gtgggtggtt tgaaataaaa gttttgttta aatatgagat      3060
     gattgattga catttatgtg gagaaatccg aaggtcaatg gcatttaaga gactcatggt      3120
     gaggccaggg cttcaggtat ttatgttggc agcagcaata cgtgtagtgt gttaaattcc      3180
     agggcgtgga agaggataca tagggagatg gattgtgtga agaaaaaaga acagggcaca      3240
     ggccagcaaa gggggctgag aaagagccca aggatgctgg agaaaaacca agagaacatc      3300
     atgtgtgtaa gtccaggaaa atagattatt ttcaaggaga agggagaggc caattgtggt      3360
     gagtaccact aagaggaggg gcaagtgaga atatgataga gaagcaagtg ctgggtttgg      3420
     tggagtcgat atttgcagtc aatggagcat ccaggtagga aactggattg gaccatttga      3480
     agagtgagta aaagtgagga cgaggttaag gttgactgtt ttgagtagcg agcttcaggg      3540
     aaggattgtt ctctgggttc agggagccag ctgaacctaa aggaaaaggc taaagaagct      3600
     gaagagaagg aggaggacct gtgaaccaga gatgctcagt cattattagc gaggaaatac      3660
     ggagagcccc tgtgtgcagt ggtgactact catgcaaaat gtcacacagc caatatttaa      3720
     cacagccagt atttcacaca gccaatattt attagtgaca tagcatatac cagttattac      3780
     tctaggtcat gagaatggag tgataaataa aatgaatcca gtcgccatca ctatatgcca      3840
     tgtaacattt tgcaatgact gtgtatcagg cctatgaatt tcagtattca atttcaataa      3900
     tgatcctgtt gtatctgtgg tatttaaaaa catatacatc tctggaatct aaaattgaga      3960
     ggttataagt aacacccagt attacaaatt tagtgctgga aatcagattg cagtttaaat      4020
     ctgagcatat agaaagtccg tttcttctat gtcagcagat gctttttgtg tgaggtttag      4080
     gtatactgca ttatttgaca taaaccagtg tttctgccct atgtcttcag aatgacaatt      4140
     ctttatgaaa ctaatagaag aacagaagac aattgcaaaa tcatgatgaa gatactaatt      4200
     gctttagaat taaggaatac aaaaaataat atgagctgca gttataggat cagaaaagtt      4260
     aaaatgggaa tgtattcgag tgtttattat gtgatcagtg ctaagaagtg tcatcattta      4320
     attttacact taacggtaat cctgtgagga ttacgctatt attaaatgca tttgatagat      4380
     tacaaaaagg cttatggttg gtaaaaattg acccaagtag aagagatcgt gtttttattc      4440
     aggttttctg attatagagt ttgagagttt gaccatcatt agtgagtagt gactatattg      4500
     tgtctgaatt attgacacaa tttctgatat tcatatgtac caggctgttt cttagagtgg      4560
     ggacagaaat gcaagggctg ctagttctga tgtataggag aaactttcat tcattttgca      4620
     tttatcattt taaacgttgt atatgtctat ctgggcatgt gttcaagaac acaaggaagt      4680
     attaaatcac tccttcttct gaggtttgac tagcaagttg ggctagagtt acaaataaaa      4740
     tacaggttcc tagtgaaatc tgaatttcag atacacaacc ataatttatt ggaaatccaa      4800
     atttaactgg gaatcttcta ttattctctg ctctagaacg ccacacttct gatatttctc      4860
     attgctgtct aagctcttgt gtgtttggtt tttggccatc gctttcactg ctctttaagc      4920
     tcccccagag gagtggagag gtctgttttc cctcgtttgg attcctagag gcagcgcagg      4980
     cctggcacaa ggtcatcact aaggaagtgt tcacagggtg aacgcggtgg gtgctgttga      5040
     aggtaccggt aaagcgtgtg ggatgagagg agcagagagt gtctttgggg ctcccaggag      5100
     gaggcggcgc gggctgcggt gctgggcgga tcctcctcca gctcctgctt ggaggtctcc      5160
     agaacaggct ggaggcaggg agggggtccc aaaagcctgg ggatgagaag gggttttccc      5220
     gcatggtccc ccaggccccc gttcgcctca ggaagacgga ggatgagctc ctgggctgca      5280
     ggtggtgggc gttgcgggtg gggccggtta aggttccagc gcccgcaccc cgctcaggga      5340
     gccccggatg gtggcgtcgc tgtccgtgtc ttctcaggag gccgccctgt gaccggatgg      5400
     ttcgtgtccc cacagcacgt ttcctgtggc agcctaagag ggagtgtcat ttcttcaatg      5460
     ggacggagcg ggtgcggttc ctggacagat acttctataa ccaggaggag tccgtgcgct      5520
     tcgacagcga cgtgggggag ttccgggcgg tgacggagct ggggcggcct gacgctgagt      5580
     actggaacag ccagaaggac atcctggagc aggcgcgggc cgcggtggac acctactgca      5640
     gacacaacta cggggttgtg gagagcttca cagtgcagcg gcgaggtgag catggccgcg      5700
     ggcggggcct gagtccccgt gagctgggaa tctgagtgtg tgtgtgtgtg tgtgtgtgtg      5760
     tgtgtgtgtg tgtgagagag agacagagag agacagagag aggaagagag agagagagcg      5820
     ccatctgtga gcatttagaa tcctctcagt ccggagcaag cagttctgag agcacaggtg      5880
     tgtgtgtaaa gtgtggattt gtctgtgtct gtgtgtctgt tgtgggaggg gaggcaggag      5940
     ggggctgttt cttatccttg gagacctctg tggggaggtg acaagggagg tgggtgctgg      6000
     gggctggaga gagaggagac cttgattatc tcggtcctta gagatgcagg gaagggaaat      6060
     gtaaggtgtg tgtggttggg gtgaaggttt aggggaggac tgctgagggg taaggcaggt      6120
     ttgggataat gtgaggaggc cagttccaga ctctccctgg catacaccct tcgtgtaatc      6180
     tctgaattaa aagtgtgtgc tgtttgtttg taaaagcaat agattaattt ctagaggaac      6240
     tgagtagacc tctgaggcac ctctgaagct tctttagatc taaatttctt cctagttttt      6300
     tgtttttttc agtgtgtata tttttacata gtagaaatga ctgtgaaact aactttttga      6360
     attaaagttt tgacacggtt actattttat tataatgctg gtagttttct agtagttaca      6420
     tattattctt ttatatataa tatttgtgac acaactcacc tcactttccc gtttgttgac      6480
     ctttattatg acattcacca gaagttgaaa ttgtgtgttt ctggttaatt tttaatttat      6540
     attttttatt tgtaattcct ttgaattatt ttgccctatt tattggccga ttataattat      6600
     tgctctaaga attccctatt gtatttggta ggtaatggac aatgatctac ggtctaatat      6660
     cttgagggct tagtattttt ctcagtgact ttctgcgttc tttgtactat aagattatta      6720
     acactttatt gatatttgat ccagcatttg ctccagtttg tggtttgtat gtggattttg      6780
     aaaattcttt tccatgttaa gaatttgaac atttttattt aataaaatat attgcaacat      6840
     ttttattaat gatctacaat ccatctgaaa tctgccattt tgtggcattg ttgtctccag      6900
     gtttctcctt acttctaaaa aaatagttgt atttattgag agtatgctag tgtcggggat      6960
     tttcctgggc ataagcaccc caagtaacga gtcccagaca ctgccttaat ccaaatgtga      7020
     ttctggaaag aaaaatcatt ttacaatgat aggcctaata ataattatgc ttgtgttgca      7080
     cgggagatgc attgatcagc taaatgtaaa tataagaact ttcaaaactt aaatgacgtt      7140
     ccctaatcct tctctctgct tcaggactca tgcttttcta ggaaagtaaa aatttggaga      7200
     atcatttctg tctgtcccac cttcccaggg gcagaacaat ttctgttgtg ttctaaggtg      7260
     tgagtgcatg ggagtagtat tcctaaaatt catacttggt ttcctcatgt acccaactct      7320
     gtccctttat ctatgcatat tgctttaaat catatttttc tgtcaaggtg tacaaggatg      7380
     ataaataggt gccaagtgga gcactcaagt gtgatgagtg ccctcacagt ggaatggagt      7440
     gagaagcttt ctgacctcat aaactgaagg ctatcttcag tcattgtttt atatatttta      7500
     cgtgcattaa tcctcatata accccaagag gtaaattagt ataattatcc ttcattgtag      7560
     gtgacaaagt tgagacacag aagaatcaaa aaactcttcc aggatcaacc agtaaaaggc      7620
     agaccttgga ttcgaaccag gcaacctggc tcaaatatca gttttaatta ctacactctg      7680
     tactttccaa gatttgtaaa cagtttgaca atgcatgccg atttaaaact atgaagaaac      7740
     aaacacaatt tttcacaaca cctctcaaat ctaatgggtc ctcactgtca agattaaatt      7800
     ccaggctgat gacactgtaa ggtcacatgg ccagctgtgc tataggcctg gtcaaggcca      7860
     gagcctgggt ttgcagagaa gcagacacac agccaaacca ggagacttac tctgtcttcc      7920
     tgactcattc cctctacgtt gtttttctcc tagtccaacc taaggtgact gtatatcctt      7980
     caaagaccca gcccctgcag caccacaacc tcctggtctg ctctgtgagt ggtttctatc      8040
     caggcagcat tgaagtcagg tggttcctga acggccagga agagaaggct gggatggtgt      8100
     ccacaggcct gatccagaat ggagactgga ccttccagac cctggtgatg ctggaaacag      8160
     ttcctcgaag tggagaggtt tacacctgcc aagtggagca cccaagcgtg acaagccctc      8220
     tcacagtgga atggagtgag cagctttctg acttcctaaa tttctcaccc actaagaagg      8280
     ggaccgtgct aatccctgag tgtcaggttc ctcctctccc acatcctatt ttaatttgct      8340
     ccatgttctc atctccatca gcacaggtca ctgggggtag ccctgtaggt gtttctagaa      8400
     acacctgtac ctcctggaga agcagtctcg cctgccaggc gggagagact gtccctcttt      8460
     tgaacctccc catgattttg caggtcaggg tcacccactc tcccaggctc caggccctgc      8520
     ctctgggtct gagactgagt ttctggtgct gttgctctga gttatttttt gtgatctggg      8580
     aagaggagaa gtgtaggggc ctacctgaca tgaggggagt ccaatctcag ccctgctttt      8640
     tattagcttt gtcactctag acaaactact tatcctcatt gagtctcagg ctttctgtgg      8700
     atcagatgtt gaacttgtgc cttacatcaa ggctgtaata tttgaatgag tttgatgtct      8760
     gaacgtcgta actgttcagt gtaatttgaa atcctttttt tctcctgaaa tggctagtta      8820
     ttttagttct tgtgaggcag ctttctgccc cattttcaaa gctctaaatc ttagagtctc      8880
     aagtaaaaag gttcaatttg gaataaacat cactaaacct ggcttcctct ctcaggagca      8940
     cggtctgaat ctgcacagag caagatgctg agtggagtcg ggggctttgt gctgggcctg      9000
     ctcttccttg gggccgggct gttcatctac ttcaggaatc agaaaggtga ggagcctttg      9060
     ggagctggct ctctccatag gcttttctgg aggaggaact atggctttgc tgaggttagt      9120
     tctcagtata tgagtggccc tgaataaagc ctttctttcc ccaaacggct ctaatgtcct      9180
     gctaatccag aaatcatcag tgcatggtta ctatgtgaaa gcataatagc ttgtggcctg      9240
     cagagacgag aggaaggtta acaagtaggg gtcctttggt ttgagatcct ggagcaaatt      9300
     aaggaagagc cactaaggct aatggaatta cactggatcc tgtgacagac acttcaggct      9360
     tcatgggtca catggtctgt ttctgctcct ttctgccctg gttggtgtgg gttgtggtgt      9420
     tagagaaatc tcaggtggga gatctggggc tgggacattg tgttggagga cagatttgct      9480
     tcaataactt ttaagtgtat atcttttcct ctttttccca ggacactctg gacttcagcc      9540
     aacaggtaat accttttaat cctcttttag aaacagacac agtttcccta gtgagaggtg      9600
     aagccagctg gacttctggg tggggtgggg acttggagaa cttttcttac aagaggtttt      9660
     tttttgtttt tttttttttt tttttttttg agacggagtc tcgctctgtc gcccaggctg      9720
     gagtgcagtg gcgggatctc ggctcactgc aagctccgcc tcccgggttc acgccattct      9780
     cctgcctcag cctcccaagt agctgggact acaggcgccc gccactacgc ccggctaatt      9840
     ttttgtattt ttagtagaga cggggtttca ccgttttagc caggatggtc tcgatctcct      9900
     gacctcgtga tccgcccgcc tcggcctccc aaagtgctgg gattacaggc gtgagccacc      9960
     gcgcccggcc tacaagaggt ttctaaatgc accaatcagt gctttgtaaa aacacaccaa     10020
     taggttctct gtggctagct ggatgtttgt aaaatggacc aattcgcact ctgtaaaata     10080
     gaccaatcag cactctttaa aatggaccaa tcagcacttt taaaatgggc caatcaccac     10140
     tctttaaaat ggaccaatca gcactcttta aaatggacca atctgcagga catgggcagg     10200
     gacaaataca ggaataaaag ctggccaccc caaccagcag tggcaaccca ctcaggtcct     10260
     cttccctgct gtggaagttt tgttcttttg atcttcacaa taaatcttgc tgctgcccac     10320
     tctttggatc cctgccgcct ttaagagctg taacactcac tgtgaaggtc tgcaggaagt     10380
     cagcgagacc acaaacccac cggaaggaac aaactcagga cacaccagaa tgatggtaga     10440
     ggtgataagg catgagacag aaataatagg aaagactttg gatccaaatt tctgatcagg     10500
     caatttacac caaaattcct cctctccact tagaaaaggt gtgctctgcg ggactattgg     10560
     ctcaggggag actcaggaac ttctttttct tcttcctgca gtgctctcat ctgagccctt     10620
     gaaagagggg aaaagaaact gttagtagag ccaggttgaa aacaacactc tcctctgtct     10680
     tttgcaggat tcctgagctg aaatgcagat gaccacattc aaggaagaac tttctgcccc     10740
     ggctttgcag gatgaaaagc tttcctgctt ggcagt                               10776
//