Dbfetch
ID LR828235; SV 1; linear; genomic DNA; STD; HUM; 10776 BP.
XX
AC LR828235;
XX
PR Project:PRJEB39113;
XX
DT 23-JUL-2020 (Rel. 144, Created)
DT 23-JUL-2020 (Rel. 144, Last updated, Version 1)
XX
DE Homo sapiens, HLA-DRB1 gene for MHC class II antigen, cell line
DE DKMS-LSL_ID16237081_DRB1_3, allele HLA-DRB1*15:new
XX
KW .
XX
OS Homo sapiens (human)
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae;
OC Homo.
XX
RN [1]
RA Albrecht V., Schmidt H. A., Klussmeier A., Lange V., Putke K.;
RT ;
RL Submitted (29-JUN-2020) to the INSDC.
RL DKMS LIFE SCIENCE LAB, Research & Development, St. Petersburger Str. 2,
RL Saxony, 01069 Dresden, Germany
XX
DR MD5; 2943b72e64d690a72bc6e835d1597e52.
XX
FH Key Location/Qualifiers
FH
FT source 1..10776
FT /organism="Homo sapiens"
FT /mol_type="genomic DNA"
FT /cell_line="DKMS-LSL_ID16237081_DRB1_3"
FT /db_xref="taxon:9606"
FT exon 1..151
FT /gene="HLA-DRB1"
FT /allele="HLA-DRB1*15:new"
FT /number=1
FT CDS join(52..151,5416..5685,7954..8235,8936..9046,9522..9545,
FT 10688..10701)
FT /codon_start=1
FT /transl_table=1
FT /gene="HLA-DRB1"
FT /allele="HLA-DRB1*15:new"
FT /product="MHC class II antigen"
FT /function="antigen presenting molecule"
FT /protein_id="CAD0297765.1"
FT /translation="MVCLKLPGGSCMTALTVTLMVLSSPLALSGDTRPRFLWQPKRECH
FT FFNGTERVRFLDRYFYNQEESVRFDSDVGEFRAVTELGRPDAEYWNSQKDILEQARAAV
FT DTYCRHNYGVVESFTVQRRVQPKVTVYPSKTQPLQHHNLLVCSVSGFYPGSIEVRWFLN
FT GQEEKAGMVSTGLIQNGDWTFQTLVMLETVPRSGEVYTCQVEHPSVTSPLTVEWRARSE
FT SAQSKMLSGVGGFVLGLLFLGAGLFIYFRNQKGHSGLQPTGFLS"
FT intron 152..5415
FT /gene="HLA-DRB1"
FT /allele="HLA-DRB1*15:new"
FT /number=1
FT exon 5416..5685
FT /gene="HLA-DRB1"
FT /allele="HLA-DRB1*15:new"
FT /number=2
FT intron 5686..7953
FT /gene="HLA-DRB1"
FT /allele="HLA-DRB1*15:new"
FT /number=2
FT exon 7954..8235
FT /gene="HLA-DRB1"
FT /allele="HLA-DRB1*15:new"
FT /number=3
FT intron 8236..8935
FT /gene="HLA-DRB1"
FT /allele="HLA-DRB1*15:new"
FT /number=3
FT exon 8936..9046
FT /gene="HLA-DRB1"
FT /allele="HLA-DRB1*15:new"
FT /number=4
FT intron 9047..9521
FT /gene="HLA-DRB1"
FT /allele="HLA-DRB1*15:new"
FT /number=4
FT exon 9522..9545
FT /gene="HLA-DRB1"
FT /allele="HLA-DRB1*15:new"
FT /number=5
FT intron 9546..10687
FT /gene="HLA-DRB1"
FT /allele="HLA-DRB1*15:new"
FT /number=5
FT exon 10688..10776
FT /gene="HLA-DRB1"
FT /allele="HLA-DRB1*15:new"
FT /number=6
XX
SQ Sequence 10776 BP; 2822 A; 2157 C; 2614 G; 3183 T; 0 other;
gagtgagact tgcctgcttc tctggcccct ggtcctgtcc tgttctccag catggtgtgt 60
ctgaagctcc ctggaggctc ctgcatgaca gcgctgacag tgacactgat ggtgctgagc 120
tccccactgg ctttgtctgg ggacacccga cgtaagtgca cattgcgggt gctgagctac 180
tatggggtgg ggaaaatagg gagttttgtt aacattgtgc ccaggccatg tcccttaaga 240
aattgtgacg ttttcttcag agattgccca tctttatcat tggatcccaa attatttcct 300
ccataaaagg agcttgggta cttgccctct tcatgagact tgtgtaaggg gcctttgcac 360
aaatcatttc ttttcaaatc tccaccaata aaacctttgc atcacatgtc ctcagggtct 420
ttagaggatt tagaaataag gattctaaaa taaattcccc atacagcact tccctttatt 480
atgttgactt atgtcagaca aaaggaggtt cttactgaaa attttgtggg agtcaaggga 540
attcaaaggg tctctcctag acgatccagt gttaggttcc ccacaggacc tttggtgttg 600
gccatagtcc tcatatgtga ggatggaccc agtggcctcc ccattatctc ctttcttttc 660
ttgctgaact ccaatgttta taaggcctgt atccctgtag tgtatgtagg ttctctgaca 720
gaagttatac ttagtgctct tcctttcttg tggggaaaag tccctggaac tgaagctgag 780
attgttaata cttggagtca ccttacagat acagagcatt tatgaggtat tctttggtgc 840
ctaaagaact taaggcatcc tctgaaaaac tagcccaggt tcgtgttcat tatgaatctt 900
ttttaacctt tctgtacttg tttctcttgc atctcctatg tgctctaact agacatgaca 960
gaagagattt aactaatgta taaattatat gaaattctat tttttaagtc aaaaataatc 1020
aactatcaga aatttaataa tgttcaaact atatactctg tgtggggtta ccgagatgat 1080
gtgaacattg ttcacgtctc atagggctga aagtcaatgg gcaagtcttg ggaactcatt 1140
gtcttactgg ggtcttgtcc taaatttcct aggttcaccc atcatgccct cagctttcct 1200
taactagcca tgtctgctta cctcttcctc cagtttctat ttttccccag ctatgttgtc 1260
atcatttcca gaaatctcta aagcttgcac agaaccttag cactatgaga ttcattgaaa 1320
gagacttttt ttctcttttt gaggtagggc ctggctctgt cacccagtct atagctcagt 1380
ggtgtgatcg aggctcactg caacctctgc cacttatgct caagtgatcc tccctcctca 1440
ggctccagag tagctgggaa tacaggcagg caaccacgcc cagctaattt ttgtaatttt 1500
ggtagacatg agattttgcc atgttgccca ggctggtctt gaactgctgg actcaagcaa 1560
tcctcctgcc ttggcctccc aacatgctag gattatagat gtgagacact gtgcccaggc 1620
aaaagagatg actcttaata aaaaaatttc ctttttctta aatcactgtt tctttatctg 1680
tgaattcttc ttccaactag aaggaggaga aaaaagaagt ttgcctgtat ttatcactgg 1740
gaggagaagg ggtctagtgt gacattaaaa tgaaagagtg ctggagcttg agccccttct 1800
tgctttccag gatccctaca gtgatcagtt cccataccct ggtttattca tgtaaaccac 1860
acttattttt ctcagcagct actctttact gggctccatt ctaggttcaa atcattctat 1920
ttgattaagt tagagagcgt ccctactctc atggaagtta cacaagagta gaggagacag 1980
acactaaccc aataagcatt taacaaagaa gataatgtta gagagtcata gtgcactgaa 2040
gaaaagacat caggtttgtg aaaaagagag acatggattc acctacttta gttcatatgt 2100
tagggagctc cacctgagaa agtgacattc agctgagaca acaaaataag tagacagtcg 2160
tgaagatcta agggatgaaa gttccaggga gaccgaatcg ggggaaagcc ctgatgtgtt 2220
aaattatgtg gagggagaga aagaaagcta gaggggctga tgtatagaaa gcaaggaaat 2280
ggagaggcag aagatgaggg taggacacag agaggaattc aggagcctca tcattatagg 2340
ctctgatgtc cacagtaaaa aaaaattaaa ttttattatt tatttatttg tttgtttatt 2400
ttattttatt ttgtgatgga gtctctctct gttgcccagg ctagattgct gtggcacaat 2460
ctcggctcac tgcaacctcc gcctcctggg ttcaagcgat tctcctgcct cagcctcccg 2520
attagctggg gccacaggcg catgccacca cacctggcta attttttgta tttttagtag 2580
ggatagggtt tcaccgtgtt agccaggatg gtctcgatct cctgacctcg tgatccgccc 2640
gccttggcct cccaaagtgc tgggattaca ggcgtgagcc actgcgcccg gcctatattc 2700
aatgtttaaa actaattcta gctactctgt ggggattgga ttgttggggt tcactagtgg 2760
ttaggaagac tatttaggag cacagcaggg aattcttcag ggaaaacagg tttgtggctt 2820
catggagtgc attagtgata aagatggtga aaaagataaa gtggacagac ttggcatgta 2880
tttttgctta gcttgttaat gaattactgt aaagggggta gaacaatcaa gcttattcct 2940
aaggattttc ttttgacaaa taaatgggtg gtagtgttgt ttattgagat aggaaaaact 3000
atgggaggaa atgatttgaa gtgggtggtt tgaaataaaa gttttgttta aatatgagat 3060
gattgattga catttatgtg gagaaatccg aaggtcaatg gcatttaaga gactcatggt 3120
gaggccaggg cttcaggtat ttatgttggc agcagcaata cgtgtagtgt gttaaattcc 3180
agggcgtgga agaggataca tagggagatg gattgtgtga agaaaaaaga acagggcaca 3240
ggccagcaaa gggggctgag aaagagccca aggatgctgg agaaaaacca agagaacatc 3300
atgtgtgtaa gtccaggaaa atagattatt ttcaaggaga agggagaggc caattgtggt 3360
gagtaccact aagaggaggg gcaagtgaga atatgataga gaagcaagtg ctgggtttgg 3420
tggagtcgat atttgcagtc aatggagcat ccaggtagga aactggattg gaccatttga 3480
agagtgagta aaagtgagga cgaggttaag gttgactgtt ttgagtagcg agcttcaggg 3540
aaggattgtt ctctgggttc agggagccag ctgaacctaa aggaaaaggc taaagaagct 3600
gaagagaagg aggaggacct gtgaaccaga gatgctcagt cattattagc gaggaaatac 3660
ggagagcccc tgtgtgcagt ggtgactact catgcaaaat gtcacacagc caatatttaa 3720
cacagccagt atttcacaca gccaatattt attagtgaca tagcatatac cagttattac 3780
tctaggtcat gagaatggag tgataaataa aatgaatcca gtcgccatca ctatatgcca 3840
tgtaacattt tgcaatgact gtgtatcagg cctatgaatt tcagtattca atttcaataa 3900
tgatcctgtt gtatctgtgg tatttaaaaa catatacatc tctggaatct aaaattgaga 3960
ggttataagt aacacccagt attacaaatt tagtgctgga aatcagattg cagtttaaat 4020
ctgagcatat agaaagtccg tttcttctat gtcagcagat gctttttgtg tgaggtttag 4080
gtatactgca ttatttgaca taaaccagtg tttctgccct atgtcttcag aatgacaatt 4140
ctttatgaaa ctaatagaag aacagaagac aattgcaaaa tcatgatgaa gatactaatt 4200
gctttagaat taaggaatac aaaaaataat atgagctgca gttataggat cagaaaagtt 4260
aaaatgggaa tgtattcgag tgtttattat gtgatcagtg ctaagaagtg tcatcattta 4320
attttacact taacggtaat cctgtgagga ttacgctatt attaaatgca tttgatagat 4380
tacaaaaagg cttatggttg gtaaaaattg acccaagtag aagagatcgt gtttttattc 4440
aggttttctg attatagagt ttgagagttt gaccatcatt agtgagtagt gactatattg 4500
tgtctgaatt attgacacaa tttctgatat tcatatgtac caggctgttt cttagagtgg 4560
ggacagaaat gcaagggctg ctagttctga tgtataggag aaactttcat tcattttgca 4620
tttatcattt taaacgttgt atatgtctat ctgggcatgt gttcaagaac acaaggaagt 4680
attaaatcac tccttcttct gaggtttgac tagcaagttg ggctagagtt acaaataaaa 4740
tacaggttcc tagtgaaatc tgaatttcag atacacaacc ataatttatt ggaaatccaa 4800
atttaactgg gaatcttcta ttattctctg ctctagaacg ccacacttct gatatttctc 4860
attgctgtct aagctcttgt gtgtttggtt tttggccatc gctttcactg ctctttaagc 4920
tcccccagag gagtggagag gtctgttttc cctcgtttgg attcctagag gcagcgcagg 4980
cctggcacaa ggtcatcact aaggaagtgt tcacagggtg aacgcggtgg gtgctgttga 5040
aggtaccggt aaagcgtgtg ggatgagagg agcagagagt gtctttgggg ctcccaggag 5100
gaggcggcgc gggctgcggt gctgggcgga tcctcctcca gctcctgctt ggaggtctcc 5160
agaacaggct ggaggcaggg agggggtccc aaaagcctgg ggatgagaag gggttttccc 5220
gcatggtccc ccaggccccc gttcgcctca ggaagacgga ggatgagctc ctgggctgca 5280
ggtggtgggc gttgcgggtg gggccggtta aggttccagc gcccgcaccc cgctcaggga 5340
gccccggatg gtggcgtcgc tgtccgtgtc ttctcaggag gccgccctgt gaccggatgg 5400
ttcgtgtccc cacagcacgt ttcctgtggc agcctaagag ggagtgtcat ttcttcaatg 5460
ggacggagcg ggtgcggttc ctggacagat acttctataa ccaggaggag tccgtgcgct 5520
tcgacagcga cgtgggggag ttccgggcgg tgacggagct ggggcggcct gacgctgagt 5580
actggaacag ccagaaggac atcctggagc aggcgcgggc cgcggtggac acctactgca 5640
gacacaacta cggggttgtg gagagcttca cagtgcagcg gcgaggtgag catggccgcg 5700
ggcggggcct gagtccccgt gagctgggaa tctgagtgtg tgtgtgtgtg tgtgtgtgtg 5760
tgtgtgtgtg tgtgagagag agacagagag agacagagag aggaagagag agagagagcg 5820
ccatctgtga gcatttagaa tcctctcagt ccggagcaag cagttctgag agcacaggtg 5880
tgtgtgtaaa gtgtggattt gtctgtgtct gtgtgtctgt tgtgggaggg gaggcaggag 5940
ggggctgttt cttatccttg gagacctctg tggggaggtg acaagggagg tgggtgctgg 6000
gggctggaga gagaggagac cttgattatc tcggtcctta gagatgcagg gaagggaaat 6060
gtaaggtgtg tgtggttggg gtgaaggttt aggggaggac tgctgagggg taaggcaggt 6120
ttgggataat gtgaggaggc cagttccaga ctctccctgg catacaccct tcgtgtaatc 6180
tctgaattaa aagtgtgtgc tgtttgtttg taaaagcaat agattaattt ctagaggaac 6240
tgagtagacc tctgaggcac ctctgaagct tctttagatc taaatttctt cctagttttt 6300
tgtttttttc agtgtgtata tttttacata gtagaaatga ctgtgaaact aactttttga 6360
attaaagttt tgacacggtt actattttat tataatgctg gtagttttct agtagttaca 6420
tattattctt ttatatataa tatttgtgac acaactcacc tcactttccc gtttgttgac 6480
ctttattatg acattcacca gaagttgaaa ttgtgtgttt ctggttaatt tttaatttat 6540
attttttatt tgtaattcct ttgaattatt ttgccctatt tattggccga ttataattat 6600
tgctctaaga attccctatt gtatttggta ggtaatggac aatgatctac ggtctaatat 6660
cttgagggct tagtattttt ctcagtgact ttctgcgttc tttgtactat aagattatta 6720
acactttatt gatatttgat ccagcatttg ctccagtttg tggtttgtat gtggattttg 6780
aaaattcttt tccatgttaa gaatttgaac atttttattt aataaaatat attgcaacat 6840
ttttattaat gatctacaat ccatctgaaa tctgccattt tgtggcattg ttgtctccag 6900
gtttctcctt acttctaaaa aaatagttgt atttattgag agtatgctag tgtcggggat 6960
tttcctgggc ataagcaccc caagtaacga gtcccagaca ctgccttaat ccaaatgtga 7020
ttctggaaag aaaaatcatt ttacaatgat aggcctaata ataattatgc ttgtgttgca 7080
cgggagatgc attgatcagc taaatgtaaa tataagaact ttcaaaactt aaatgacgtt 7140
ccctaatcct tctctctgct tcaggactca tgcttttcta ggaaagtaaa aatttggaga 7200
atcatttctg tctgtcccac cttcccaggg gcagaacaat ttctgttgtg ttctaaggtg 7260
tgagtgcatg ggagtagtat tcctaaaatt catacttggt ttcctcatgt acccaactct 7320
gtccctttat ctatgcatat tgctttaaat catatttttc tgtcaaggtg tacaaggatg 7380
ataaataggt gccaagtgga gcactcaagt gtgatgagtg ccctcacagt ggaatggagt 7440
gagaagcttt ctgacctcat aaactgaagg ctatcttcag tcattgtttt atatatttta 7500
cgtgcattaa tcctcatata accccaagag gtaaattagt ataattatcc ttcattgtag 7560
gtgacaaagt tgagacacag aagaatcaaa aaactcttcc aggatcaacc agtaaaaggc 7620
agaccttgga ttcgaaccag gcaacctggc tcaaatatca gttttaatta ctacactctg 7680
tactttccaa gatttgtaaa cagtttgaca atgcatgccg atttaaaact atgaagaaac 7740
aaacacaatt tttcacaaca cctctcaaat ctaatgggtc ctcactgtca agattaaatt 7800
ccaggctgat gacactgtaa ggtcacatgg ccagctgtgc tataggcctg gtcaaggcca 7860
gagcctgggt ttgcagagaa gcagacacac agccaaacca ggagacttac tctgtcttcc 7920
tgactcattc cctctacgtt gtttttctcc tagtccaacc taaggtgact gtatatcctt 7980
caaagaccca gcccctgcag caccacaacc tcctggtctg ctctgtgagt ggtttctatc 8040
caggcagcat tgaagtcagg tggttcctga acggccagga agagaaggct gggatggtgt 8100
ccacaggcct gatccagaat ggagactgga ccttccagac cctggtgatg ctggaaacag 8160
ttcctcgaag tggagaggtt tacacctgcc aagtggagca cccaagcgtg acaagccctc 8220
tcacagtgga atggagtgag cagctttctg acttcctaaa tttctcaccc actaagaagg 8280
ggaccgtgct aatccctgag tgtcaggttc ctcctctccc acatcctatt ttaatttgct 8340
ccatgttctc atctccatca gcacaggtca ctgggggtag ccctgtaggt gtttctagaa 8400
acacctgtac ctcctggaga agcagtctcg cctgccaggc gggagagact gtccctcttt 8460
tgaacctccc catgattttg caggtcaggg tcacccactc tcccaggctc caggccctgc 8520
ctctgggtct gagactgagt ttctggtgct gttgctctga gttatttttt gtgatctggg 8580
aagaggagaa gtgtaggggc ctacctgaca tgaggggagt ccaatctcag ccctgctttt 8640
tattagcttt gtcactctag acaaactact tatcctcatt gagtctcagg ctttctgtgg 8700
atcagatgtt gaacttgtgc cttacatcaa ggctgtaata tttgaatgag tttgatgtct 8760
gaacgtcgta actgttcagt gtaatttgaa atcctttttt tctcctgaaa tggctagtta 8820
ttttagttct tgtgaggcag ctttctgccc cattttcaaa gctctaaatc ttagagtctc 8880
aagtaaaaag gttcaatttg gaataaacat cactaaacct ggcttcctct ctcaggagca 8940
cggtctgaat ctgcacagag caagatgctg agtggagtcg ggggctttgt gctgggcctg 9000
ctcttccttg gggccgggct gttcatctac ttcaggaatc agaaaggtga ggagcctttg 9060
ggagctggct ctctccatag gcttttctgg aggaggaact atggctttgc tgaggttagt 9120
tctcagtata tgagtggccc tgaataaagc ctttctttcc ccaaacggct ctaatgtcct 9180
gctaatccag aaatcatcag tgcatggtta ctatgtgaaa gcataatagc ttgtggcctg 9240
cagagacgag aggaaggtta acaagtaggg gtcctttggt ttgagatcct ggagcaaatt 9300
aaggaagagc cactaaggct aatggaatta cactggatcc tgtgacagac acttcaggct 9360
tcatgggtca catggtctgt ttctgctcct ttctgccctg gttggtgtgg gttgtggtgt 9420
tagagaaatc tcaggtggga gatctggggc tgggacattg tgttggagga cagatttgct 9480
tcaataactt ttaagtgtat atcttttcct ctttttccca ggacactctg gacttcagcc 9540
aacaggtaat accttttaat cctcttttag aaacagacac agtttcccta gtgagaggtg 9600
aagccagctg gacttctggg tggggtgggg acttggagaa cttttcttac aagaggtttt 9660
tttttgtttt tttttttttt tttttttttg agacggagtc tcgctctgtc gcccaggctg 9720
gagtgcagtg gcgggatctc ggctcactgc aagctccgcc tcccgggttc acgccattct 9780
cctgcctcag cctcccaagt agctgggact acaggcgccc gccactacgc ccggctaatt 9840
ttttgtattt ttagtagaga cggggtttca ccgttttagc caggatggtc tcgatctcct 9900
gacctcgtga tccgcccgcc tcggcctccc aaagtgctgg gattacaggc gtgagccacc 9960
gcgcccggcc tacaagaggt ttctaaatgc accaatcagt gctttgtaaa aacacaccaa 10020
taggttctct gtggctagct ggatgtttgt aaaatggacc aattcgcact ctgtaaaata 10080
gaccaatcag cactctttaa aatggaccaa tcagcacttt taaaatgggc caatcaccac 10140
tctttaaaat ggaccaatca gcactcttta aaatggacca atctgcagga catgggcagg 10200
gacaaataca ggaataaaag ctggccaccc caaccagcag tggcaaccca ctcaggtcct 10260
cttccctgct gtggaagttt tgttcttttg atcttcacaa taaatcttgc tgctgcccac 10320
tctttggatc cctgccgcct ttaagagctg taacactcac tgtgaaggtc tgcaggaagt 10380
cagcgagacc acaaacccac cggaaggaac aaactcagga cacaccagaa tgatggtaga 10440
ggtgataagg catgagacag aaataatagg aaagactttg gatccaaatt tctgatcagg 10500
caatttacac caaaattcct cctctccact tagaaaaggt gtgctctgcg ggactattgg 10560
ctcaggggag actcaggaac ttctttttct tcttcctgca gtgctctcat ctgagccctt 10620
gaaagagggg aaaagaaact gttagtagag ccaggttgaa aacaacactc tcctctgtct 10680
tttgcaggat tcctgagctg aaatgcagat gaccacattc aaggaagaac tttctgcccc 10740
ggctttgcag gatgaaaagc tttcctgctt ggcagt 10776
//