Dbfetch

ID   LR828230; SV 1; linear; genomic DNA; STD; HUM; 10900 BP.
XX
AC   LR828230;
XX
PR   Project:PRJEB39113;
XX
DT   23-JUL-2020 (Rel. 144, Created)
DT   23-JUL-2020 (Rel. 144, Last updated, Version 1)
XX
DE   Homo sapiens, HLA-DRB1 gene for MHC class II antigen, cell line
DE   DKMS-LSL_ID16188406_DRB1_3, allele HLA-DRB1*15:new
XX
KW   .
XX
OS   Homo sapiens (human)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae;
OC   Homo.
XX
RN   [1]
RA   Albrecht V., Schmidt H. A., Klussmeier A., Lange V., Putke K.;
RT   ;
RL   Submitted (29-JUN-2020) to the INSDC.
RL   DKMS LIFE SCIENCE LAB, Research & Development, St. Petersburger Str. 2,
RL   Saxony, 01069 Dresden, Germany
XX
DR   MD5; 12e5644aaabbc501520f7f8b96f2ecf8.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..10900
FT                   /organism="Homo sapiens"
FT                   /mol_type="genomic DNA"
FT                   /cell_line="DKMS-LSL_ID16188406_DRB1_3"
FT                   /db_xref="taxon:9606"
FT   exon            1..151
FT                   /gene="HLA-DRB1"
FT                   /allele="HLA-DRB1*15:new"
FT                   /number=1
FT   CDS             join(52..151,5416..5685,7952..8233,8934..9044,9520..9543,
FT                   10686..10699)
FT                   /codon_start=1
FT                   /transl_table=1
FT                   /gene="HLA-DRB1"
FT                   /allele="HLA-DRB1*15:new"
FT                   /product="MHC class II antigen"
FT                   /function="antigen presenting molecule"
FT                   /protein_id="CAD0297760.1"
FT                   /translation="MVCLKLPGGSCMTALTVTLMVLSSPLALAGDTRPRFLWQPKRECH
FT                   FFNGTERVRFLDRYFYNQEESVRFDSDVGEYRAVTELGRPDAEYWNSQKDILEQARAAV
FT                   DTYCRHNYGVVESFTVQRRVQPKVTVYPSKTQPLQHHNLLVCSVSGFYPGSIEVRWFLN
FT                   GQEEKAGMVSTGLIQNGDWTFQTLVMLETVPRSGEVYTCQVEHPSVTSPLTVEWRARSE
FT                   SAQSKMLSGVGGFVLGLLFLGAGLFIYFRNQKGHSGLQPTGFLS"
FT   intron          152..5415
FT                   /gene="HLA-DRB1"
FT                   /allele="HLA-DRB1*15:new"
FT                   /number=1
FT   exon            5416..5685
FT                   /gene="HLA-DRB1"
FT                   /allele="HLA-DRB1*15:new"
FT                   /number=2
FT   intron          5686..7951
FT                   /gene="HLA-DRB1"
FT                   /allele="HLA-DRB1*15:new"
FT                   /number=2
FT   exon            7952..8233
FT                   /gene="HLA-DRB1"
FT                   /allele="HLA-DRB1*15:new"
FT                   /number=3
FT   intron          8234..8933
FT                   /gene="HLA-DRB1"
FT                   /allele="HLA-DRB1*15:new"
FT                   /number=3
FT   exon            8934..9044
FT                   /gene="HLA-DRB1"
FT                   /allele="HLA-DRB1*15:new"
FT                   /number=4
FT   intron          9045..9519
FT                   /gene="HLA-DRB1"
FT                   /allele="HLA-DRB1*15:new"
FT                   /number=4
FT   exon            9520..9543
FT                   /gene="HLA-DRB1"
FT                   /allele="HLA-DRB1*15:new"
FT                   /number=5
FT   intron          9544..10685
FT                   /gene="HLA-DRB1"
FT                   /allele="HLA-DRB1*15:new"
FT                   /number=5
FT   exon            10686..10900
FT                   /gene="HLA-DRB1"
FT                   /allele="HLA-DRB1*15:new"
FT                   /number=6
XX
SQ   Sequence 10900 BP; 2844 A; 2199 C; 2646 G; 3211 T; 0 other;
     gagtgagact tgcctgcttc tctggcccct ggtcctgtcc tgttctccag catggtgtgt        60
     ctgaagctcc ctggaggctc ctgcatgaca gcgctgacag tgacactgat ggtgctgagc       120
     tccccactgg ctttggctgg ggacacccga cgtaagtgca cattgcgggt gctgagctac       180
     tatggggtgg ggaaaatagg gagttttgtt aacattgtgc ccaggccatg tcccttaaga       240
     aattgtgacg ttttcttcag agattgccca tctttatcat tggatcccaa attatttcct       300
     ccataaaagg agcttgggta cttgccctct tcatgagact tgtgtaaggg gcctttgcac       360
     aagtcatttc ttttcaaatc tccaccaata aaacctttgc ctcacatgtc ctcagggtct       420
     ttagaggatt tagaaataag gattctaaaa taaattcccc atacagcact tccctttatt       480
     atgttgactt atgtcagaca aaaggaggtt cttactgaaa attttgtggg agtcaaggga       540
     attcaaaggg tctctcctag acgatccagt gttaggttcc ccacaggacc tttggtgttg       600
     gccatagtcc tcatatgtga ggatggaccc agtggcctcc ccattatctc ctttcttttc       660
     ttgctgaact ccaatgttta taaggcctgt atccctgtag cgtatgtagg ttctctgaca       720
     gaagttatac ttagtgctct tcctttcttg tggggaaaag tccctggaac tgaagctgag       780
     attgttagta cttggagtca ccttacagat acagagcatt tatgaggtat tctttggtgc       840
     ctaaagaact taaggcatcc tctgaaaaac tagcccaggt tcgtgttcat tatgaatctt       900
     ttttaacctt tctgtacttg tttctcttgc atctcctatg tgctctaact agacatgaca       960
     gaagagattt aactaatgta taaattatat gaaattctat tttttaagtc aaaaataatc      1020
     aactatcaga aatttaataa tgttcaaact atatactctg tgtggggtta ccgagatgat      1080
     gtgaacattg ttcacgtctc atagggctga aagtcaatgg gcaagtcttg ggaactcatt      1140
     gtcttactgg ggtcttgtcc taaatttcct aggttcaccc atcatgccct cagctttcct      1200
     taactagcca tgtctgctta cctcttcctc cagtttctat ttttccccag ctatgttgtc      1260
     atcatttcca gaaatctcta aagcttgcac agaaccttag cactatgaga ttcattgaaa      1320
     gagacttttt ttctcttttt gaggtagggc ctggctctgt cacccagtct atagctcagt      1380
     ggtgtgatcg aggctcactg caacctctgc cacccatgct caagtgatcc tccctcctca      1440
     ggctccagag tagctgggaa tacaggcagg caaccacgcc cagctaattt ttgtaatttt      1500
     ggtagacatg agattttgcc atgttgccca ggctggtctt aaactgctgg cttcaagcaa      1560
     tcctcctgcc ttggcctccc aacatgctag gattatagat gtgagccact gtgcccaggc      1620
     aaaagagatg actcttaata aaaaaatttc ctttttctta aatcactgtt tctttatctg      1680
     tgaattcttc ttccaactag aaggaggaga aaaaagaagt ttgcctgtat ttatcactgg      1740
     gaggagaagg ggtctagtgt gacattaaaa tgaaagagtg ctggagcttg agccccttct      1800
     tgctttccag gatccctaca gtgatcagtt cccataccct ggtttattca tgtaaaccac      1860
     acttattttt ctcagcagct actctttact gggctccatt ctaggttcaa atcattctat      1920
     ttgattaagt tagagagcgt ccctactctc atggaagtta cacaagagta gaggagacag      1980
     acactaaccc aataagcatt taacaaagaa gataatgtta gagagtcata gtgcactgaa      2040
     gaaaagacat caggtttgtg aaaaagagag acatggattc acctacttta gttcatatgt      2100
     tagggagctc cacctgagaa agtgacattc agctgagaca acaaaataag tagacagtcg      2160
     tgaagatcta agggatgaaa gttccaggga gaccgaatcg ggggaaagcc ctgatgtgtt      2220
     aaattatgtg gagggagaga aagaaagcta gaggggctga tgtatagaaa gcaaggaaat      2280
     ggagaggcag aagatgaggg taggacacag agaggaattc aggagcctca tcattatagg      2340
     ctctgatgtc cacagtaaaa aaaaattaaa tttttattat ttatttattt gtttatttta      2400
     ttttattttg tgatggagtc tctctgtgtt gcccagggta gattgctgtg gcacaatctc      2460
     ggctcactgc aacctccgcc tcctgggttc aagcgattct cctgcctcag cctcccgatt      2520
     agctggggcc acaggcgcat gccaccacac ctggctaatt ttttgtattt ttagtaggga      2580
     tagggtttca ccgtgttagc caggatggtc tcgatctcct gacctcgtga tccgcccgcc      2640
     ttggcctccc aaagtgctgg gattacaggc gtgagccact gcgcccggcc tatattcaat      2700
     gtttaaaact aattctagct actctgtggg gattggattg ttggggttca ctagtggtta      2760
     ggaagactat ttaggagcac agcagggaat tcttcaggga aaacaggttt gtggcttcat      2820
     ggagtgcatt agtgataaag atggtgaaaa agataaagtg gacagacttg gcatgtattt      2880
     ttgcttagct tgttaatgaa ttactgtaaa gggggtagaa caatcaagct tattcctaag      2940
     gattttcttt tgacaaataa atgggtggta gtgttgttta ttgagatagg aaaaactatg      3000
     ggaggaaatg atttgaagtg ggtggtttga aataaaagtt ttgtttaaat atgagatgat      3060
     tgattgacat ttatgtggag aaatccgaag gtcaatggca tttaagagac tcatggtgag      3120
     gccagggctt cacgtattta tgttggcagc agcaatacgt gtagtgtgtt aaattccagg      3180
     gcgtggaaga ggatacatag ggagatggat tgtgtgaaga aaaaagaaca gggcacaggc      3240
     cagcaaaggg ggctgagaaa gagcccaagg atgctggaga aaaaccaaga gaacatcatg      3300
     tgtgtaagtc caggaaaata gattattttc aaggagaagg gagaggccaa ttgtggtgag      3360
     taccactaag aggaggggca agtgagaata tgatagagaa gcaagtgctg ggtttggtgg      3420
     agtcgatatt tgcagtcaat ggagcatcca ggtaggaaac tggattggac catttgaaga      3480
     gtgagtaaaa gtgaggacga ggttaaggtt gactgttttg agtagagagc ttcagggaag      3540
     gattgttctc tgggttcagg gagccagctg aacctaaagg aaaaggctaa agaagctgaa      3600
     gagaaggagg aggacctgtg aaccagagat gctcagtcat tattagcgag gaaatatgga      3660
     gagcccctgt gtgcagtggt gactactcat gcaaaatgtc acacagccaa tatttaacac      3720
     agccagtatt tcacacagcc aatatttatt agtgacatag catataccag ttattactct      3780
     aggtcatgag aatggagtga taaataaaat gaatccagtc gccatcacta tatgccatgt      3840
     aacattttgc aatgactgtg tatcaggcct atgaatttca gtattcaatt tcaataatga      3900
     tcctgttgta tctgtggtat ttaaaaacat atacatctct ggaatctaaa attgagaggt      3960
     tataagtaac acccagtatt acaaatttag tgctggaaat cagattgcag tttaaatctg      4020
     agcatataga aagtccgttt cttctatgtc agcagatgct ttttgtgtga ggtttaggta      4080
     tactgcatta tttgacataa accagtgttt ctgccctatg tcttcagaat gacaattctt      4140
     tatgaaacta atagaagaac agaagacaat tgcaaaatca tgatgaagat actaattgct      4200
     ttagaattaa ggaatacaaa aaataatatg agctgcagtt ataggatcag aaaagttaaa      4260
     atgggaatgt attcgagtgt ttattatgtg atcagtgcta agaagtgtca tcatttaatt      4320
     ttacacttaa cggtaatcct gtgaggatta cgctattatt aaatgcattt gatagattac      4380
     aaaaaggctt atggttggta aaaattgacc caagtagaag agatcgtgtt tttattcagg      4440
     ttttctgatt atagagtttg agagtttgac catcattagt gagtagtgac tatattgtgt      4500
     ctgaattatt gacacaattt ctgatattca tatgtaccag gctgtttctt agagtgggga      4560
     cagaaatgca agggctgcta gttctgatgt ataggagaaa ctttcattca ttttgcattt      4620
     atcattttaa acgttgtata tgtctatctg ggcatgtgtt caagaacaca aggaagtatt      4680
     aaatcactcc ttcttctgag gtttgactag caagttgggc tagagttaca aataaaatac      4740
     aggttcctag tgaaatctga atttcagata cacaaccata atttattgga aatccaaatt      4800
     taactgggaa tcttctatta ttctctgctc tagaacgcca cacttctgat atttctcatt      4860
     gctgtctaag ctcttgtgtg tttggttttt ggccatcgct ttcactgctc tttaagctcc      4920
     cccagcggag tggagaggtc tgttttccct cgtttggatt cctagaggca gcgcaggcct      4980
     ggcacaaggt catcactaag gaagtgttca cagggtgaac gcggtgggtg ctgttgaagg      5040
     taccggtaaa gcgtgtggga tgagagaagg agcagagagt gcctttgggg ctcccaggag      5100
     gaggcggcgc gggctccggt gctgggcgga tcctcctcca gctcctgctt ggaggtctcc      5160
     agaacaggct ggaggcaggg agggggtccc aaaagcctgg ggatgagaag gggttttccc      5220
     gcatggtccc ccaggccccc gttcgcctca ggaagacgga ggatgagctc ctgggctgca      5280
     ggtggtgggc gttgcgggtg gggccggtta aggttccagc gcccgcaccc cgctcaggga      5340
     gccccggatg gtggcgtcgc tgtccgtgtc ttctcaggag gccgccctgt gaccggatgg      5400
     ttcgtgtccc cacagcacgt ttcctgtggc agcctaagag ggagtgtcat ttcttcaatg      5460
     ggacggagcg ggtgcggttc ctggacagat acttctataa ccaggaggag tccgtgcgct      5520
     tcgacagcga cgtgggggag taccgggcgg tgacggagct ggggcggcct gacgctgagt      5580
     actggaacag ccagaaggac atcctggagc aggcgcgggc cgcggtggac acctactgca      5640
     gacacaacta cggggttgtg gagagcttca cagtgcagcg gcgaggtgag catggccgcg      5700
     ggcggggcct gagtccccgt gagctgggaa tctgagtgtg tgtgtgtgtg tgtgtgtgtg      5760
     tgtgtgtgtg tgagagagag acagagagag acagagagag gaagagagag agagagcgcc      5820
     atctgtgagc atttagaatc ctctcagtcc ggagcaagca gttctgagag cacaggtgtg      5880
     tgtgtaaagt gtggatttgt ctgtgtctgt gtgtctgttg tgggagggga ggcaggaggg      5940
     ggctgtttct tatccttgga gacctctgtg gggaggtgac aagggaggtg ggtgctgggg      6000
     gctggagaga gaggagacct tgattatctc ggtccttaga gatgcaggga agggaaatgt      6060
     aaggtgtgtg tggttggggt gaaggtttag gggaggactg ctgaggggta aggcaggttt      6120
     gggataatgt gaggaggcca gttccagact ctccctggca tacacccttc gtgtaatctc      6180
     tgaattaaaa gtgtgtgctg tttgtttgta aaagcaatag attaatttct agaggaactg      6240
     agtagacctc tgaggcacct ctgaagcttc tttagatcta aatttcttcc tagttttttg      6300
     tttttttcag tgtgtatatt tttacatagt agaaatgact gtgaaactaa ctttttgaat      6360
     taaagttttg acacggttac tattttatta taatgctggt agttttctag tagttacata      6420
     ttattctttt atatataata tttgtgacac aactcacctc actttcccgt ttgttgacct      6480
     ttattatgac attcaccaga agttgaaatt gtgtgtttct ggttaatttt taatttatat      6540
     tttttatttg taattccttt gaattatttt gccctattta ttggccgatt ataattattg      6600
     ctctaagaat tccctattgt atttggtagg taatggacaa tgatctacgg tctaatatct      6660
     tgagggctta gtatttttct cagtgacttt ctgcgttctt tgtactataa gattattaac      6720
     actttattga tatttgatcc agcatttgct ccagtttgtg gtttgtatgt ggattttgaa      6780
     aattcttttc catgttaaga atttgaacat ttttatttaa taaaatatat tgcaacattt      6840
     ttattaatga tctacaatcc atctgaaatc tgccattttg tggcattgtt gtctccaggt      6900
     ttctccttac ttctaaaaaa atagttgtat ttattgagag tatgctagtg tcggggattt      6960
     tcctgggcat aagcacccca agtaacgagt cccagacact gccttaatcc aaatgtgatt      7020
     ctggaaagaa aaatcatttt acaatgatag gcctaataat aattatgctt gtgttgcacg      7080
     ggagatgcat tgatcagcta aatgtaaata taagaacttt caaaacttaa atgacgttcc      7140
     ctaatccttc tctctgcttc aggactcatg cttttctagg aaagtaaaaa tttggagaat      7200
     catttctgtc tgtcccacct tcccaggggc agaacaattt ctgttgtgtt ctaaggtgtg      7260
     agtgcatggg agtagtattc ctaaaattca tacttggttt cctcatgtac ccaactctgt      7320
     ccctttatct atgcatattg ctttaaatca tatttttctg tcaaggtgta caaggatgat      7380
     aaataggtgc caagtggagc actcaagtgt gatgagtgcc ctcacagtgg aatggagtga      7440
     gaagctttct gacctcataa actgaaggct atcttcagtc attgttttat atattttacg      7500
     tgcattaatc ctcatataac cccaagaggt aaattagtat aattatcctt cattgtaggt      7560
     gacaaagttg agacacagaa gaatcaaaaa actcttccag gatcaaccag taaaaggcag      7620
     accttggatt cgaaccaggc aacctggctc aaatatcagt tttaattact acactctgta      7680
     ctttccaaga tttgtaaaca gtttgacaat gcatgccgat ttaaaactat gaagaaacaa      7740
     acacaatttt tcacaacacc tctcaaatct aatgggtcct cactgtcaag attaaattcc      7800
     aggctgatga cactgtaagg tcacatggcc agctgtgcta taggcctggt caaggccaga      7860
     gcctgggttt gcagagaagc agacacacag ccaaaccagg agacttactc tgtcttcctg      7920
     actcattccc tctacgttgt ttttctccta gtccaaccta aggtgactgt atatccttca      7980
     aagacccagc ccctgcagca ccacaacctc ctggtctgct ctgtgagtgg tttctatcca      8040
     ggcagcattg aagtcaggtg gttcctgaac ggccaggaag agaaggctgg gatggtgtcc      8100
     acaggcctga tccagaatgg agactggacc ttccagaccc tggtgatgct ggaaacagtt      8160
     cctcgaagtg gagaggttta cacctgccaa gtggagcacc caagcgtgac aagccctctc      8220
     acagtggaat ggagtgagca gctttctgac ttcctaaatt tctcacccac taagaagggg      8280
     accgtgctaa tccctgagtg tcaggttcct cctctcccac atcctatttt aatttgctcc      8340
     atgttctcat ctccatcagc acaggtcact gggggtagcc ctgtaggtgt ttctagaaac      8400
     acctgtacct cctggagaag cagtctcgcc tgccaggcgg gagagactgt ccctcttttg      8460
     aacctcccca tgattttgca ggtcagggtc acccactctc ccaggctcca ggccctgcct      8520
     ctgggtctga gactgagttt ctggtgctgt tgctctgagt tattttttgt gatctgggaa      8580
     gaggagaagt gtaggggcct acctgacatg aggggagtcc aatctcagcc ctgcttttta      8640
     ttagctttgt cactctagac aaactactta tcctcattga gtctcaggct ttctgtggat      8700
     cagatgttga acttgtgcct tacatcaagg ctgtaatatt tgaatgagtt tgatgtctga      8760
     acgtcgtaac tgttcagtgt aatttgaaat cctttttttc tcctgaaatg gctagttatt      8820
     ttagttcttg tgaggcagct ttctgcccca ttttcaaagc tctaaatctt agagtctcaa      8880
     gtaaaaaggt tcaatttgga ataaacatca ctaaacctgg cttcctctct caggagcacg      8940
     gtctgaatct gcacagagca agatgctgag tggagtcggg ggctttgtgc tgggcctgct      9000
     cttccttggg gccgggctgt tcatctactt caggaatcag aaaggtgagg agcctttggg      9060
     agctggctct ctccataggc ttttctggag gaggaactat ggctttgctg aggttagttc      9120
     tcagtatatg agtggccctg aataaagcct ttctttcccc aaacggctct aatgtcctgc      9180
     taatccagaa atcatcagtg catggttact atgtgaaagc ataatagctt gtggcctgca      9240
     gagacgagag gaaggttaac aagtaggggt cctttggttt gagatcctgg agcaaattaa      9300
     ggaagagcca ctaaggctaa tggaattaca ctggatcctg tgacagacac ttcaggcttc      9360
     atgggtcaca tggtctgttt ctgctccttt ctgccctggt tggtgtgggt tgtggtgtta      9420
     gagaaatctc aggtgggaga tctggggctg ggacattgtg ttggaggaca gatttgcttc      9480
     aataactttt aagtgtatat cttttcctct ttttcccagg acactctgga cttcagccaa      9540
     caggtaatac cttttaatcc tcttttagaa acagacacag tttccctagt gagaggtgaa      9600
     gccagctgga cttctgggtg gggtggggac ttggagaact tttcttacaa gaggtttttt      9660
     tttgtttttt tttttttttt tttttttgag acggagtctc gctctgtcgc ccaggctgga      9720
     gtgcagtggc gggatctcgg ctcactgcaa gctccgcctc ccgggttcac gccattctcc      9780
     tgcctcagcc tcccaagtag ctgggactac aggcgcccgc cactacgccc ggctaatttt      9840
     ttgtattttt agtagagacg gggtttcacc gttttagcca ggatggtctc gatctcctga      9900
     cctcgtgatc cgcccgcctc ggcctcccaa agtgctggga ttacaggcgt gagccaccgc      9960
     gcccggccta caagaggttt ctaaatgcac caatcagtgc tttgtaaaaa cacaccaata     10020
     ggttctctgt ggctagctgg atgtttgtaa aatggaccaa ttcgcactct gtaaaataga     10080
     ccaatcagca ctctttaaaa tggaccaatc agcactttta aaatgggcca atcaccactc     10140
     tttaaaatgg accaatcagc actctttaaa atggaccaat ctgcaggaca tgggcaggga     10200
     caaatacagg aataaaagct ggccacccca accagcagtg gcaacccact caggtcctct     10260
     tccctgctgt ggaagttttg ttcttttgat cttcacaata aatcttgctg ctgcccactc     10320
     tttggatccc tgccgccttt aagagctgta acactcactg tgaaggtctg caggaagtca     10380
     gcgagaccac aaacccaccg gaaggaacaa actcaggaca caccagaatg atggtagagg     10440
     tgataaggca tgagacagaa ataataggaa agactttgga tccaaatttc tgatcaggca     10500
     atttacacca aaattcctcc tctccactta gaaaaggtgt gctctgcggg actattggct     10560
     caggggagac tcaggaactt ctttttcttc ttcctgcagt gctctcatct gagcccttga     10620
     aagaggggaa aagaaactgt tagtagagcc aggttgaaaa caacactctc ctctgtcttt     10680
     tgcaggattc ctgagctgaa atgcagatga ccacattcaa ggaagaactt tctgccccgg     10740
     ctttgcagga tgaaaagctt tcctgcttgg cagttattct tccacaagag agggctttct     10800
     caggacctgg ttgctactgg ttcggcaact gcagaaaatg tcctcccttg tggcttcctc     10860
     agctcctgcc cttggcctga agtcccagca ttgatggcag                           10900
//