Dbfetch
ID LR828230; SV 1; linear; genomic DNA; STD; HUM; 10900 BP.
XX
AC LR828230;
XX
PR Project:PRJEB39113;
XX
DT 23-JUL-2020 (Rel. 144, Created)
DT 23-JUL-2020 (Rel. 144, Last updated, Version 1)
XX
DE Homo sapiens, HLA-DRB1 gene for MHC class II antigen, cell line
DE DKMS-LSL_ID16188406_DRB1_3, allele HLA-DRB1*15:new
XX
KW .
XX
OS Homo sapiens (human)
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae;
OC Homo.
XX
RN [1]
RA Albrecht V., Schmidt H. A., Klussmeier A., Lange V., Putke K.;
RT ;
RL Submitted (29-JUN-2020) to the INSDC.
RL DKMS LIFE SCIENCE LAB, Research & Development, St. Petersburger Str. 2,
RL Saxony, 01069 Dresden, Germany
XX
DR MD5; 12e5644aaabbc501520f7f8b96f2ecf8.
XX
FH Key Location/Qualifiers
FH
FT source 1..10900
FT /organism="Homo sapiens"
FT /mol_type="genomic DNA"
FT /cell_line="DKMS-LSL_ID16188406_DRB1_3"
FT /db_xref="taxon:9606"
FT exon 1..151
FT /gene="HLA-DRB1"
FT /allele="HLA-DRB1*15:new"
FT /number=1
FT CDS join(52..151,5416..5685,7952..8233,8934..9044,9520..9543,
FT 10686..10699)
FT /codon_start=1
FT /transl_table=1
FT /gene="HLA-DRB1"
FT /allele="HLA-DRB1*15:new"
FT /product="MHC class II antigen"
FT /function="antigen presenting molecule"
FT /protein_id="CAD0297760.1"
FT /translation="MVCLKLPGGSCMTALTVTLMVLSSPLALAGDTRPRFLWQPKRECH
FT FFNGTERVRFLDRYFYNQEESVRFDSDVGEYRAVTELGRPDAEYWNSQKDILEQARAAV
FT DTYCRHNYGVVESFTVQRRVQPKVTVYPSKTQPLQHHNLLVCSVSGFYPGSIEVRWFLN
FT GQEEKAGMVSTGLIQNGDWTFQTLVMLETVPRSGEVYTCQVEHPSVTSPLTVEWRARSE
FT SAQSKMLSGVGGFVLGLLFLGAGLFIYFRNQKGHSGLQPTGFLS"
FT intron 152..5415
FT /gene="HLA-DRB1"
FT /allele="HLA-DRB1*15:new"
FT /number=1
FT exon 5416..5685
FT /gene="HLA-DRB1"
FT /allele="HLA-DRB1*15:new"
FT /number=2
FT intron 5686..7951
FT /gene="HLA-DRB1"
FT /allele="HLA-DRB1*15:new"
FT /number=2
FT exon 7952..8233
FT /gene="HLA-DRB1"
FT /allele="HLA-DRB1*15:new"
FT /number=3
FT intron 8234..8933
FT /gene="HLA-DRB1"
FT /allele="HLA-DRB1*15:new"
FT /number=3
FT exon 8934..9044
FT /gene="HLA-DRB1"
FT /allele="HLA-DRB1*15:new"
FT /number=4
FT intron 9045..9519
FT /gene="HLA-DRB1"
FT /allele="HLA-DRB1*15:new"
FT /number=4
FT exon 9520..9543
FT /gene="HLA-DRB1"
FT /allele="HLA-DRB1*15:new"
FT /number=5
FT intron 9544..10685
FT /gene="HLA-DRB1"
FT /allele="HLA-DRB1*15:new"
FT /number=5
FT exon 10686..10900
FT /gene="HLA-DRB1"
FT /allele="HLA-DRB1*15:new"
FT /number=6
XX
SQ Sequence 10900 BP; 2844 A; 2199 C; 2646 G; 3211 T; 0 other;
gagtgagact tgcctgcttc tctggcccct ggtcctgtcc tgttctccag catggtgtgt 60
ctgaagctcc ctggaggctc ctgcatgaca gcgctgacag tgacactgat ggtgctgagc 120
tccccactgg ctttggctgg ggacacccga cgtaagtgca cattgcgggt gctgagctac 180
tatggggtgg ggaaaatagg gagttttgtt aacattgtgc ccaggccatg tcccttaaga 240
aattgtgacg ttttcttcag agattgccca tctttatcat tggatcccaa attatttcct 300
ccataaaagg agcttgggta cttgccctct tcatgagact tgtgtaaggg gcctttgcac 360
aagtcatttc ttttcaaatc tccaccaata aaacctttgc ctcacatgtc ctcagggtct 420
ttagaggatt tagaaataag gattctaaaa taaattcccc atacagcact tccctttatt 480
atgttgactt atgtcagaca aaaggaggtt cttactgaaa attttgtggg agtcaaggga 540
attcaaaggg tctctcctag acgatccagt gttaggttcc ccacaggacc tttggtgttg 600
gccatagtcc tcatatgtga ggatggaccc agtggcctcc ccattatctc ctttcttttc 660
ttgctgaact ccaatgttta taaggcctgt atccctgtag cgtatgtagg ttctctgaca 720
gaagttatac ttagtgctct tcctttcttg tggggaaaag tccctggaac tgaagctgag 780
attgttagta cttggagtca ccttacagat acagagcatt tatgaggtat tctttggtgc 840
ctaaagaact taaggcatcc tctgaaaaac tagcccaggt tcgtgttcat tatgaatctt 900
ttttaacctt tctgtacttg tttctcttgc atctcctatg tgctctaact agacatgaca 960
gaagagattt aactaatgta taaattatat gaaattctat tttttaagtc aaaaataatc 1020
aactatcaga aatttaataa tgttcaaact atatactctg tgtggggtta ccgagatgat 1080
gtgaacattg ttcacgtctc atagggctga aagtcaatgg gcaagtcttg ggaactcatt 1140
gtcttactgg ggtcttgtcc taaatttcct aggttcaccc atcatgccct cagctttcct 1200
taactagcca tgtctgctta cctcttcctc cagtttctat ttttccccag ctatgttgtc 1260
atcatttcca gaaatctcta aagcttgcac agaaccttag cactatgaga ttcattgaaa 1320
gagacttttt ttctcttttt gaggtagggc ctggctctgt cacccagtct atagctcagt 1380
ggtgtgatcg aggctcactg caacctctgc cacccatgct caagtgatcc tccctcctca 1440
ggctccagag tagctgggaa tacaggcagg caaccacgcc cagctaattt ttgtaatttt 1500
ggtagacatg agattttgcc atgttgccca ggctggtctt aaactgctgg cttcaagcaa 1560
tcctcctgcc ttggcctccc aacatgctag gattatagat gtgagccact gtgcccaggc 1620
aaaagagatg actcttaata aaaaaatttc ctttttctta aatcactgtt tctttatctg 1680
tgaattcttc ttccaactag aaggaggaga aaaaagaagt ttgcctgtat ttatcactgg 1740
gaggagaagg ggtctagtgt gacattaaaa tgaaagagtg ctggagcttg agccccttct 1800
tgctttccag gatccctaca gtgatcagtt cccataccct ggtttattca tgtaaaccac 1860
acttattttt ctcagcagct actctttact gggctccatt ctaggttcaa atcattctat 1920
ttgattaagt tagagagcgt ccctactctc atggaagtta cacaagagta gaggagacag 1980
acactaaccc aataagcatt taacaaagaa gataatgtta gagagtcata gtgcactgaa 2040
gaaaagacat caggtttgtg aaaaagagag acatggattc acctacttta gttcatatgt 2100
tagggagctc cacctgagaa agtgacattc agctgagaca acaaaataag tagacagtcg 2160
tgaagatcta agggatgaaa gttccaggga gaccgaatcg ggggaaagcc ctgatgtgtt 2220
aaattatgtg gagggagaga aagaaagcta gaggggctga tgtatagaaa gcaaggaaat 2280
ggagaggcag aagatgaggg taggacacag agaggaattc aggagcctca tcattatagg 2340
ctctgatgtc cacagtaaaa aaaaattaaa tttttattat ttatttattt gtttatttta 2400
ttttattttg tgatggagtc tctctgtgtt gcccagggta gattgctgtg gcacaatctc 2460
ggctcactgc aacctccgcc tcctgggttc aagcgattct cctgcctcag cctcccgatt 2520
agctggggcc acaggcgcat gccaccacac ctggctaatt ttttgtattt ttagtaggga 2580
tagggtttca ccgtgttagc caggatggtc tcgatctcct gacctcgtga tccgcccgcc 2640
ttggcctccc aaagtgctgg gattacaggc gtgagccact gcgcccggcc tatattcaat 2700
gtttaaaact aattctagct actctgtggg gattggattg ttggggttca ctagtggtta 2760
ggaagactat ttaggagcac agcagggaat tcttcaggga aaacaggttt gtggcttcat 2820
ggagtgcatt agtgataaag atggtgaaaa agataaagtg gacagacttg gcatgtattt 2880
ttgcttagct tgttaatgaa ttactgtaaa gggggtagaa caatcaagct tattcctaag 2940
gattttcttt tgacaaataa atgggtggta gtgttgttta ttgagatagg aaaaactatg 3000
ggaggaaatg atttgaagtg ggtggtttga aataaaagtt ttgtttaaat atgagatgat 3060
tgattgacat ttatgtggag aaatccgaag gtcaatggca tttaagagac tcatggtgag 3120
gccagggctt cacgtattta tgttggcagc agcaatacgt gtagtgtgtt aaattccagg 3180
gcgtggaaga ggatacatag ggagatggat tgtgtgaaga aaaaagaaca gggcacaggc 3240
cagcaaaggg ggctgagaaa gagcccaagg atgctggaga aaaaccaaga gaacatcatg 3300
tgtgtaagtc caggaaaata gattattttc aaggagaagg gagaggccaa ttgtggtgag 3360
taccactaag aggaggggca agtgagaata tgatagagaa gcaagtgctg ggtttggtgg 3420
agtcgatatt tgcagtcaat ggagcatcca ggtaggaaac tggattggac catttgaaga 3480
gtgagtaaaa gtgaggacga ggttaaggtt gactgttttg agtagagagc ttcagggaag 3540
gattgttctc tgggttcagg gagccagctg aacctaaagg aaaaggctaa agaagctgaa 3600
gagaaggagg aggacctgtg aaccagagat gctcagtcat tattagcgag gaaatatgga 3660
gagcccctgt gtgcagtggt gactactcat gcaaaatgtc acacagccaa tatttaacac 3720
agccagtatt tcacacagcc aatatttatt agtgacatag catataccag ttattactct 3780
aggtcatgag aatggagtga taaataaaat gaatccagtc gccatcacta tatgccatgt 3840
aacattttgc aatgactgtg tatcaggcct atgaatttca gtattcaatt tcaataatga 3900
tcctgttgta tctgtggtat ttaaaaacat atacatctct ggaatctaaa attgagaggt 3960
tataagtaac acccagtatt acaaatttag tgctggaaat cagattgcag tttaaatctg 4020
agcatataga aagtccgttt cttctatgtc agcagatgct ttttgtgtga ggtttaggta 4080
tactgcatta tttgacataa accagtgttt ctgccctatg tcttcagaat gacaattctt 4140
tatgaaacta atagaagaac agaagacaat tgcaaaatca tgatgaagat actaattgct 4200
ttagaattaa ggaatacaaa aaataatatg agctgcagtt ataggatcag aaaagttaaa 4260
atgggaatgt attcgagtgt ttattatgtg atcagtgcta agaagtgtca tcatttaatt 4320
ttacacttaa cggtaatcct gtgaggatta cgctattatt aaatgcattt gatagattac 4380
aaaaaggctt atggttggta aaaattgacc caagtagaag agatcgtgtt tttattcagg 4440
ttttctgatt atagagtttg agagtttgac catcattagt gagtagtgac tatattgtgt 4500
ctgaattatt gacacaattt ctgatattca tatgtaccag gctgtttctt agagtgggga 4560
cagaaatgca agggctgcta gttctgatgt ataggagaaa ctttcattca ttttgcattt 4620
atcattttaa acgttgtata tgtctatctg ggcatgtgtt caagaacaca aggaagtatt 4680
aaatcactcc ttcttctgag gtttgactag caagttgggc tagagttaca aataaaatac 4740
aggttcctag tgaaatctga atttcagata cacaaccata atttattgga aatccaaatt 4800
taactgggaa tcttctatta ttctctgctc tagaacgcca cacttctgat atttctcatt 4860
gctgtctaag ctcttgtgtg tttggttttt ggccatcgct ttcactgctc tttaagctcc 4920
cccagcggag tggagaggtc tgttttccct cgtttggatt cctagaggca gcgcaggcct 4980
ggcacaaggt catcactaag gaagtgttca cagggtgaac gcggtgggtg ctgttgaagg 5040
taccggtaaa gcgtgtggga tgagagaagg agcagagagt gcctttgggg ctcccaggag 5100
gaggcggcgc gggctccggt gctgggcgga tcctcctcca gctcctgctt ggaggtctcc 5160
agaacaggct ggaggcaggg agggggtccc aaaagcctgg ggatgagaag gggttttccc 5220
gcatggtccc ccaggccccc gttcgcctca ggaagacgga ggatgagctc ctgggctgca 5280
ggtggtgggc gttgcgggtg gggccggtta aggttccagc gcccgcaccc cgctcaggga 5340
gccccggatg gtggcgtcgc tgtccgtgtc ttctcaggag gccgccctgt gaccggatgg 5400
ttcgtgtccc cacagcacgt ttcctgtggc agcctaagag ggagtgtcat ttcttcaatg 5460
ggacggagcg ggtgcggttc ctggacagat acttctataa ccaggaggag tccgtgcgct 5520
tcgacagcga cgtgggggag taccgggcgg tgacggagct ggggcggcct gacgctgagt 5580
actggaacag ccagaaggac atcctggagc aggcgcgggc cgcggtggac acctactgca 5640
gacacaacta cggggttgtg gagagcttca cagtgcagcg gcgaggtgag catggccgcg 5700
ggcggggcct gagtccccgt gagctgggaa tctgagtgtg tgtgtgtgtg tgtgtgtgtg 5760
tgtgtgtgtg tgagagagag acagagagag acagagagag gaagagagag agagagcgcc 5820
atctgtgagc atttagaatc ctctcagtcc ggagcaagca gttctgagag cacaggtgtg 5880
tgtgtaaagt gtggatttgt ctgtgtctgt gtgtctgttg tgggagggga ggcaggaggg 5940
ggctgtttct tatccttgga gacctctgtg gggaggtgac aagggaggtg ggtgctgggg 6000
gctggagaga gaggagacct tgattatctc ggtccttaga gatgcaggga agggaaatgt 6060
aaggtgtgtg tggttggggt gaaggtttag gggaggactg ctgaggggta aggcaggttt 6120
gggataatgt gaggaggcca gttccagact ctccctggca tacacccttc gtgtaatctc 6180
tgaattaaaa gtgtgtgctg tttgtttgta aaagcaatag attaatttct agaggaactg 6240
agtagacctc tgaggcacct ctgaagcttc tttagatcta aatttcttcc tagttttttg 6300
tttttttcag tgtgtatatt tttacatagt agaaatgact gtgaaactaa ctttttgaat 6360
taaagttttg acacggttac tattttatta taatgctggt agttttctag tagttacata 6420
ttattctttt atatataata tttgtgacac aactcacctc actttcccgt ttgttgacct 6480
ttattatgac attcaccaga agttgaaatt gtgtgtttct ggttaatttt taatttatat 6540
tttttatttg taattccttt gaattatttt gccctattta ttggccgatt ataattattg 6600
ctctaagaat tccctattgt atttggtagg taatggacaa tgatctacgg tctaatatct 6660
tgagggctta gtatttttct cagtgacttt ctgcgttctt tgtactataa gattattaac 6720
actttattga tatttgatcc agcatttgct ccagtttgtg gtttgtatgt ggattttgaa 6780
aattcttttc catgttaaga atttgaacat ttttatttaa taaaatatat tgcaacattt 6840
ttattaatga tctacaatcc atctgaaatc tgccattttg tggcattgtt gtctccaggt 6900
ttctccttac ttctaaaaaa atagttgtat ttattgagag tatgctagtg tcggggattt 6960
tcctgggcat aagcacccca agtaacgagt cccagacact gccttaatcc aaatgtgatt 7020
ctggaaagaa aaatcatttt acaatgatag gcctaataat aattatgctt gtgttgcacg 7080
ggagatgcat tgatcagcta aatgtaaata taagaacttt caaaacttaa atgacgttcc 7140
ctaatccttc tctctgcttc aggactcatg cttttctagg aaagtaaaaa tttggagaat 7200
catttctgtc tgtcccacct tcccaggggc agaacaattt ctgttgtgtt ctaaggtgtg 7260
agtgcatggg agtagtattc ctaaaattca tacttggttt cctcatgtac ccaactctgt 7320
ccctttatct atgcatattg ctttaaatca tatttttctg tcaaggtgta caaggatgat 7380
aaataggtgc caagtggagc actcaagtgt gatgagtgcc ctcacagtgg aatggagtga 7440
gaagctttct gacctcataa actgaaggct atcttcagtc attgttttat atattttacg 7500
tgcattaatc ctcatataac cccaagaggt aaattagtat aattatcctt cattgtaggt 7560
gacaaagttg agacacagaa gaatcaaaaa actcttccag gatcaaccag taaaaggcag 7620
accttggatt cgaaccaggc aacctggctc aaatatcagt tttaattact acactctgta 7680
ctttccaaga tttgtaaaca gtttgacaat gcatgccgat ttaaaactat gaagaaacaa 7740
acacaatttt tcacaacacc tctcaaatct aatgggtcct cactgtcaag attaaattcc 7800
aggctgatga cactgtaagg tcacatggcc agctgtgcta taggcctggt caaggccaga 7860
gcctgggttt gcagagaagc agacacacag ccaaaccagg agacttactc tgtcttcctg 7920
actcattccc tctacgttgt ttttctccta gtccaaccta aggtgactgt atatccttca 7980
aagacccagc ccctgcagca ccacaacctc ctggtctgct ctgtgagtgg tttctatcca 8040
ggcagcattg aagtcaggtg gttcctgaac ggccaggaag agaaggctgg gatggtgtcc 8100
acaggcctga tccagaatgg agactggacc ttccagaccc tggtgatgct ggaaacagtt 8160
cctcgaagtg gagaggttta cacctgccaa gtggagcacc caagcgtgac aagccctctc 8220
acagtggaat ggagtgagca gctttctgac ttcctaaatt tctcacccac taagaagggg 8280
accgtgctaa tccctgagtg tcaggttcct cctctcccac atcctatttt aatttgctcc 8340
atgttctcat ctccatcagc acaggtcact gggggtagcc ctgtaggtgt ttctagaaac 8400
acctgtacct cctggagaag cagtctcgcc tgccaggcgg gagagactgt ccctcttttg 8460
aacctcccca tgattttgca ggtcagggtc acccactctc ccaggctcca ggccctgcct 8520
ctgggtctga gactgagttt ctggtgctgt tgctctgagt tattttttgt gatctgggaa 8580
gaggagaagt gtaggggcct acctgacatg aggggagtcc aatctcagcc ctgcttttta 8640
ttagctttgt cactctagac aaactactta tcctcattga gtctcaggct ttctgtggat 8700
cagatgttga acttgtgcct tacatcaagg ctgtaatatt tgaatgagtt tgatgtctga 8760
acgtcgtaac tgttcagtgt aatttgaaat cctttttttc tcctgaaatg gctagttatt 8820
ttagttcttg tgaggcagct ttctgcccca ttttcaaagc tctaaatctt agagtctcaa 8880
gtaaaaaggt tcaatttgga ataaacatca ctaaacctgg cttcctctct caggagcacg 8940
gtctgaatct gcacagagca agatgctgag tggagtcggg ggctttgtgc tgggcctgct 9000
cttccttggg gccgggctgt tcatctactt caggaatcag aaaggtgagg agcctttggg 9060
agctggctct ctccataggc ttttctggag gaggaactat ggctttgctg aggttagttc 9120
tcagtatatg agtggccctg aataaagcct ttctttcccc aaacggctct aatgtcctgc 9180
taatccagaa atcatcagtg catggttact atgtgaaagc ataatagctt gtggcctgca 9240
gagacgagag gaaggttaac aagtaggggt cctttggttt gagatcctgg agcaaattaa 9300
ggaagagcca ctaaggctaa tggaattaca ctggatcctg tgacagacac ttcaggcttc 9360
atgggtcaca tggtctgttt ctgctccttt ctgccctggt tggtgtgggt tgtggtgtta 9420
gagaaatctc aggtgggaga tctggggctg ggacattgtg ttggaggaca gatttgcttc 9480
aataactttt aagtgtatat cttttcctct ttttcccagg acactctgga cttcagccaa 9540
caggtaatac cttttaatcc tcttttagaa acagacacag tttccctagt gagaggtgaa 9600
gccagctgga cttctgggtg gggtggggac ttggagaact tttcttacaa gaggtttttt 9660
tttgtttttt tttttttttt tttttttgag acggagtctc gctctgtcgc ccaggctgga 9720
gtgcagtggc gggatctcgg ctcactgcaa gctccgcctc ccgggttcac gccattctcc 9780
tgcctcagcc tcccaagtag ctgggactac aggcgcccgc cactacgccc ggctaatttt 9840
ttgtattttt agtagagacg gggtttcacc gttttagcca ggatggtctc gatctcctga 9900
cctcgtgatc cgcccgcctc ggcctcccaa agtgctggga ttacaggcgt gagccaccgc 9960
gcccggccta caagaggttt ctaaatgcac caatcagtgc tttgtaaaaa cacaccaata 10020
ggttctctgt ggctagctgg atgtttgtaa aatggaccaa ttcgcactct gtaaaataga 10080
ccaatcagca ctctttaaaa tggaccaatc agcactttta aaatgggcca atcaccactc 10140
tttaaaatgg accaatcagc actctttaaa atggaccaat ctgcaggaca tgggcaggga 10200
caaatacagg aataaaagct ggccacccca accagcagtg gcaacccact caggtcctct 10260
tccctgctgt ggaagttttg ttcttttgat cttcacaata aatcttgctg ctgcccactc 10320
tttggatccc tgccgccttt aagagctgta acactcactg tgaaggtctg caggaagtca 10380
gcgagaccac aaacccaccg gaaggaacaa actcaggaca caccagaatg atggtagagg 10440
tgataaggca tgagacagaa ataataggaa agactttgga tccaaatttc tgatcaggca 10500
atttacacca aaattcctcc tctccactta gaaaaggtgt gctctgcggg actattggct 10560
caggggagac tcaggaactt ctttttcttc ttcctgcagt gctctcatct gagcccttga 10620
aagaggggaa aagaaactgt tagtagagcc aggttgaaaa caacactctc ctctgtcttt 10680
tgcaggattc ctgagctgaa atgcagatga ccacattcaa ggaagaactt tctgccccgg 10740
ctttgcagga tgaaaagctt tcctgcttgg cagttattct tccacaagag agggctttct 10800
caggacctgg ttgctactgg ttcggcaact gcagaaaatg tcctcccttg tggcttcctc 10860
agctcctgcc cttggcctga agtcccagca ttgatggcag 10900
//