Dbfetch
ID LR763079; SV 1; linear; genomic DNA; STD; HUM; 3312 BP.
XX
AC LR763079;
XX
PR Project:PRJEB36689;
XX
DT 24-NOV-2020 (Rel. 144, Created)
DT 24-NOV-2020 (Rel. 144, Last updated, Version 1)
XX
DE Homo sapiens, HLA-E pseudogene, cell line DKMS-LSL_ID15647322_E_1, null
DE allele HLA-E*01:new
XX
KW .
XX
OS Homo sapiens (human)
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae;
OC Homo.
XX
RN [1]
RA Albrecht V., Schmidt H. A., Klussmeier A., Lange V., Putke K.;
RT ;
RL Submitted (14-FEB-2020) to the INSDC.
RL DKMS LIFE SCIENCE LAB, Research & Development, St. Petersburger Str. 2,
RL Saxony, 01069 Dresden, Germany
XX
DR MD5; 620a8dd8ed20bf38058a0700a466ae1b.
XX
FH Key Location/Qualifiers
FH
FT source 1..3312
FT /organism="Homo sapiens"
FT /mol_type="genomic DNA"
FT /cell_line="DKMS-LSL_ID15647322_E_1"
FT /db_xref="taxon:9606"
FT exon 1..98
FT /gene="HLA-E"
FT /allele="HLA-E*01:new"
FT /number=1
FT CDS join(35..98,229..498,743..1018,1640..1915,2039..2155,
FT 2906..2938,3043..3085,3251..3255)
FT /codon_start=1
FT /transl_table=1
FT /gene="HLA-E"
FT /allele="HLA-E*01:new"
FT /note="MHC class I antigen null allele"
FT /pseudogene="allelic"
FT intron 99..228
FT /gene="HLA-E"
FT /allele="HLA-E*01:new"
FT /number=1
FT exon 229..498
FT /gene="HLA-E"
FT /allele="HLA-E*01:new"
FT /number=2
FT intron 499..742
FT /gene="HLA-E"
FT /allele="HLA-E*01:new"
FT /number=2
FT exon 743..1018
FT /gene="HLA-E"
FT /allele="HLA-E*01:new"
FT /number=3
FT intron 1019..1639
FT /gene="HLA-E"
FT /allele="HLA-E*01:new"
FT /number=3
FT exon 1640..1915
FT /gene="HLA-E"
FT /allele="HLA-E*01:new"
FT /number=4
FT intron 1916..2038
FT /gene="HLA-E"
FT /allele="HLA-E*01:new"
FT /number=4
FT exon 2039..2155
FT /gene="HLA-E"
FT /allele="HLA-E*01:new"
FT /number=5
FT intron 2156..2905
FT /gene="HLA-E"
FT /allele="HLA-E*01:new"
FT /number=5
FT exon 2906..2938
FT /gene="HLA-E"
FT /allele="HLA-E*01:new"
FT /number=6
FT intron 2939..3042
FT /gene="HLA-E"
FT /allele="HLA-E*01:new"
FT /number=6
FT exon 3043..3085
FT /gene="HLA-E"
FT /allele="HLA-E*01:new"
FT /number=7
FT intron 3086..3250
FT /gene="HLA-E"
FT /allele="HLA-E*01:new"
FT /number=7
FT exon 3251..3312
FT /gene="HLA-E"
FT /allele="HLA-E*01:new"
FT /number=8
XX
SQ Sequence 3312 BP; 659 A; 932 C; 990 G; 731 T; 0 other;
ctcaagaagt tctcaggact cagaggctgg gatcatggta gatggaaccc tccttttact 60
cctctcggag gccctggccc ttacccagac ctgggcgggt gagtgcgggg tcgggatgga 120
aacggcctct accgggagta gagaggggcc ggcccggcgg gggcgaagga ctcggggagc 180
cgcgccggga ggagggtcgg gccgatctca gcccctcctc gcccccaggc tcccactcct 240
tgaagtattt ccacacttcc gtgtcccggc ccggccgcgg ggagccccgc ttcatctctg 300
tgggctacgt ggacgacacc cagttcgtgc gcttcgacaa cgacgccgcg agtccgagga 360
tggtgccgcg ggcgccgtgg atggagcagg aggggtcaga gtattgggac cgggagacac 420
ggagcgccag ggacaccgca cagattttcc gagtgaacgt gcggacgctg cgcggctact 480
acaatcagag cgaggccggt gagtgacccc ggccagggga gcaggtcacg acccctcccc 540
atcccccacg gacggcgcgg gtcccctcga atcttcgggt cccagattca ccccaaggct 600
gcggaacccg cccagaccct agaccgggga gagtctcagg cgcctttacc cggttctttt 660
tcagtttagg ccaaaatgcc cacagggtgg tggcgacggg ggcggggctt ggtgggcggg 720
actgactaag gggcggggcc agggtctcac accctgcagt ggatgcatgg ctgcgagctg 780
gggcccgaca ggcgcttcct ccgcgggtat gaacagttcg cctacgacgg caaggattat 840
ctcaccctga atgaggacct gcgctcctgg accgcggtgg acacggcggc tcagatctcc 900
gagcaaaagt caaatgatgc ctctgaggcg gagcaccaga gagcctacct ggaagacaca 960
tgcgtggagt ggctccacaa atacctggag aaggggaagg agacgctgct tcacctgggt 1020
aagagggtcc acagggctac tctcccatct ccttcttggg ctaggactgt gcccacagct 1080
gacagacctc aaacagtaga agaaacaggg atggaggcca gaataccact cctcccttgg 1140
atcaggagag ggagctgtca cctgaggtac aggagatcct ataccacaga gtgactctct 1200
taaagggcca gacctctctc aggggcaatt aaggaatcta gtctcgctgg agattccatc 1260
cttcagatga actgatgagc agttctcttt gactcccagt attaggaatc acgggggagt 1320
ttctctcgtg cctgattctc agccccacac caagagtttt tggaggtctg actccagctt 1380
ttctcagtca ctcagcatcc acacaggcca ggaccagaaa tcccttttca ccttctaccc 1440
tgggctagct catcccgatt ctagaacttt ccaaggaata agaggctatc ccagatccct 1500
aagtccaggc tggtgtcaag gttttgtcct cttctcctac tataattgtc ctcttccttc 1560
tcaggatggt cacatgggtg ctgctggagt gtcccatgag agatacaaag tgcctgaatt 1620
ttctgactct tcccctcaga gcccccaaag acacacgtga ctcaccaccc catctctgac 1680
catgaggcca ccctgaggtg ctgggccctg ggcttctacc ctgcggagat cacactgacc 1740
tggcagcagg atggggaggg ccatacccag gacacggagc tcgtggagac caggcctgca 1800
ggggatggaa ccttccagaa gtgggcagct gtggtggtgc cttctggaga ggagcagaga 1860
tacacgtgcc atgtgcagca tgaggggcta cccgagcccg tcaccctgag atggagtaag 1920
gagggggatg ggaggtcatg tctcttctca gggaaagcgg gagcccttct ggagcccttc 1980
cgcagggtca gggctgaggc ctgggggtca gggcccctta cgttccctct tttcccagag 2040
ccggcttccc agcccaccat ccccatcgtg ggcatcattg ctggcctggt tctccttgga 2100
tctgtggtct ctggagctgt ggttgctgct gtgatatgga ggaagaagag ctcaggtggg 2160
gaagggagaa gggtggggtc tgagttttct tgtcccactg ggtgtttcaa gccctaggta 2220
aaagtgtgtc ctgcctcgtt actgggaagc accatccaca cacacgagcc tacccagcct 2280
ggggccctgt gtgccagcac ctactctttt tttttgagac ggagtcttgg ctctgtcacc 2340
caggctggag tgcaatggcg tggtttcagc tcactgcaac ctccgcctcc caggttcaag 2400
caattctcct gcctcagcct ccctagtagc tgggactaca catgcgtgcc accacacctg 2460
gctaattttt ttttttgtat ttttagtgga gatggggttt cactatgttg gccaggctgg 2520
tctcgaactc ctgactttgt gatctgcctg cctcggcctc ccaaagtgct gggattacag 2580
tcgtgagcca ccgcacccag ccgcacctac tcttttgtaa agcacctgtg acaatgaagg 2640
acagatttat caccttgacg attgtggtga tggggacctg atcccagcag tcacaggtca 2700
caggggaagg tccctgctga agacagacct cagaagggca gttgatccag gacccacacc 2760
tgctttcttc acgtttcctg atcctgccct gggtctgcag tcacagttca ggaaacttct 2820
ctgggatcca aaactaggag gttcctctag gaccttatgg ccctgcctcc tccctggccc 2880
ctcacaggac attttcttcc aacaggtgga aaaggaggga gctactctaa ggctgagtgt 2940
aagtgcgggg cgggagcgtg gaggagctcg cccaccctat aattcctcct gcaccacatc 3000
tcctgtgggc tctgaccagg tcttgttttt gttctacccc agggagcgac agtgcccagg 3060
ggtctgagtc tcacagcttg taaaggtgag attctggggg tctgaagtgg gtggagggtg 3120
gggcagaggg gacaggactg ggttgtgggg attttttgat tcagaatttt tgagtgtgtg 3180
gtgggctgtt cagagtgtca tcacttaccg tgactgacct gaatttgttc atgactattt 3240
tcttctgtag cctgagacag ctgccttgtg tgcgactgag atgcacagct gccttgtgtg 3300
cgactgagat gc 3312
//
ID LR763209; SV 1; linear; genomic DNA; STD; HUM; 3312 BP.
XX
AC LR763209;
XX
PR Project:PRJEB36689;
XX
DT 24-NOV-2020 (Rel. 144, Created)
DT 24-NOV-2020 (Rel. 144, Last updated, Version 1)
XX
DE Homo sapiens, HLA-E pseudogene, cell line DKMS-LSL_ID17441417_E_1, null
DE allele HLA-E*01:new
XX
KW .
XX
OS Homo sapiens (human)
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae;
OC Homo.
XX
RN [1]
RA Albrecht V., Schmidt H. A., Klussmeier A., Lange V., Putke K.;
RT ;
RL Submitted (14-FEB-2020) to the INSDC.
RL DKMS LIFE SCIENCE LAB, Research & Development, St. Petersburger Str. 2,
RL Saxony, 01069 Dresden, Germany
XX
DR MD5; 620a8dd8ed20bf38058a0700a466ae1b.
XX
FH Key Location/Qualifiers
FH
FT source 1..3312
FT /organism="Homo sapiens"
FT /mol_type="genomic DNA"
FT /cell_line="DKMS-LSL_ID17441417_E_1"
FT /db_xref="taxon:9606"
FT exon 1..98
FT /gene="HLA-E"
FT /allele="HLA-E*01:new"
FT /number=1
FT CDS join(35..98,229..498,743..1018,1640..1915,2039..2155,
FT 2906..2938,3043..3085,3251..3255)
FT /codon_start=1
FT /transl_table=1
FT /gene="HLA-E"
FT /allele="HLA-E*01:new"
FT /note="MHC class I antigen null allele"
FT /pseudogene="allelic"
FT intron 99..228
FT /gene="HLA-E"
FT /allele="HLA-E*01:new"
FT /number=1
FT exon 229..498
FT /gene="HLA-E"
FT /allele="HLA-E*01:new"
FT /number=2
FT intron 499..742
FT /gene="HLA-E"
FT /allele="HLA-E*01:new"
FT /number=2
FT exon 743..1018
FT /gene="HLA-E"
FT /allele="HLA-E*01:new"
FT /number=3
FT intron 1019..1639
FT /gene="HLA-E"
FT /allele="HLA-E*01:new"
FT /number=3
FT exon 1640..1915
FT /gene="HLA-E"
FT /allele="HLA-E*01:new"
FT /number=4
FT intron 1916..2038
FT /gene="HLA-E"
FT /allele="HLA-E*01:new"
FT /number=4
FT exon 2039..2155
FT /gene="HLA-E"
FT /allele="HLA-E*01:new"
FT /number=5
FT intron 2156..2905
FT /gene="HLA-E"
FT /allele="HLA-E*01:new"
FT /number=5
FT exon 2906..2938
FT /gene="HLA-E"
FT /allele="HLA-E*01:new"
FT /number=6
FT intron 2939..3042
FT /gene="HLA-E"
FT /allele="HLA-E*01:new"
FT /number=6
FT exon 3043..3085
FT /gene="HLA-E"
FT /allele="HLA-E*01:new"
FT /number=7
FT intron 3086..3250
FT /gene="HLA-E"
FT /allele="HLA-E*01:new"
FT /number=7
FT exon 3251..3312
FT /gene="HLA-E"
FT /allele="HLA-E*01:new"
FT /number=8
XX
SQ Sequence 3312 BP; 659 A; 932 C; 990 G; 731 T; 0 other;
ctcaagaagt tctcaggact cagaggctgg gatcatggta gatggaaccc tccttttact 60
cctctcggag gccctggccc ttacccagac ctgggcgggt gagtgcgggg tcgggatgga 120
aacggcctct accgggagta gagaggggcc ggcccggcgg gggcgaagga ctcggggagc 180
cgcgccggga ggagggtcgg gccgatctca gcccctcctc gcccccaggc tcccactcct 240
tgaagtattt ccacacttcc gtgtcccggc ccggccgcgg ggagccccgc ttcatctctg 300
tgggctacgt ggacgacacc cagttcgtgc gcttcgacaa cgacgccgcg agtccgagga 360
tggtgccgcg ggcgccgtgg atggagcagg aggggtcaga gtattgggac cgggagacac 420
ggagcgccag ggacaccgca cagattttcc gagtgaacgt gcggacgctg cgcggctact 480
acaatcagag cgaggccggt gagtgacccc ggccagggga gcaggtcacg acccctcccc 540
atcccccacg gacggcgcgg gtcccctcga atcttcgggt cccagattca ccccaaggct 600
gcggaacccg cccagaccct agaccgggga gagtctcagg cgcctttacc cggttctttt 660
tcagtttagg ccaaaatgcc cacagggtgg tggcgacggg ggcggggctt ggtgggcggg 720
actgactaag gggcggggcc agggtctcac accctgcagt ggatgcatgg ctgcgagctg 780
gggcccgaca ggcgcttcct ccgcgggtat gaacagttcg cctacgacgg caaggattat 840
ctcaccctga atgaggacct gcgctcctgg accgcggtgg acacggcggc tcagatctcc 900
gagcaaaagt caaatgatgc ctctgaggcg gagcaccaga gagcctacct ggaagacaca 960
tgcgtggagt ggctccacaa atacctggag aaggggaagg agacgctgct tcacctgggt 1020
aagagggtcc acagggctac tctcccatct ccttcttggg ctaggactgt gcccacagct 1080
gacagacctc aaacagtaga agaaacaggg atggaggcca gaataccact cctcccttgg 1140
atcaggagag ggagctgtca cctgaggtac aggagatcct ataccacaga gtgactctct 1200
taaagggcca gacctctctc aggggcaatt aaggaatcta gtctcgctgg agattccatc 1260
cttcagatga actgatgagc agttctcttt gactcccagt attaggaatc acgggggagt 1320
ttctctcgtg cctgattctc agccccacac caagagtttt tggaggtctg actccagctt 1380
ttctcagtca ctcagcatcc acacaggcca ggaccagaaa tcccttttca ccttctaccc 1440
tgggctagct catcccgatt ctagaacttt ccaaggaata agaggctatc ccagatccct 1500
aagtccaggc tggtgtcaag gttttgtcct cttctcctac tataattgtc ctcttccttc 1560
tcaggatggt cacatgggtg ctgctggagt gtcccatgag agatacaaag tgcctgaatt 1620
ttctgactct tcccctcaga gcccccaaag acacacgtga ctcaccaccc catctctgac 1680
catgaggcca ccctgaggtg ctgggccctg ggcttctacc ctgcggagat cacactgacc 1740
tggcagcagg atggggaggg ccatacccag gacacggagc tcgtggagac caggcctgca 1800
ggggatggaa ccttccagaa gtgggcagct gtggtggtgc cttctggaga ggagcagaga 1860
tacacgtgcc atgtgcagca tgaggggcta cccgagcccg tcaccctgag atggagtaag 1920
gagggggatg ggaggtcatg tctcttctca gggaaagcgg gagcccttct ggagcccttc 1980
cgcagggtca gggctgaggc ctgggggtca gggcccctta cgttccctct tttcccagag 2040
ccggcttccc agcccaccat ccccatcgtg ggcatcattg ctggcctggt tctccttgga 2100
tctgtggtct ctggagctgt ggttgctgct gtgatatgga ggaagaagag ctcaggtggg 2160
gaagggagaa gggtggggtc tgagttttct tgtcccactg ggtgtttcaa gccctaggta 2220
aaagtgtgtc ctgcctcgtt actgggaagc accatccaca cacacgagcc tacccagcct 2280
ggggccctgt gtgccagcac ctactctttt tttttgagac ggagtcttgg ctctgtcacc 2340
caggctggag tgcaatggcg tggtttcagc tcactgcaac ctccgcctcc caggttcaag 2400
caattctcct gcctcagcct ccctagtagc tgggactaca catgcgtgcc accacacctg 2460
gctaattttt ttttttgtat ttttagtgga gatggggttt cactatgttg gccaggctgg 2520
tctcgaactc ctgactttgt gatctgcctg cctcggcctc ccaaagtgct gggattacag 2580
tcgtgagcca ccgcacccag ccgcacctac tcttttgtaa agcacctgtg acaatgaagg 2640
acagatttat caccttgacg attgtggtga tggggacctg atcccagcag tcacaggtca 2700
caggggaagg tccctgctga agacagacct cagaagggca gttgatccag gacccacacc 2760
tgctttcttc acgtttcctg atcctgccct gggtctgcag tcacagttca ggaaacttct 2820
ctgggatcca aaactaggag gttcctctag gaccttatgg ccctgcctcc tccctggccc 2880
ctcacaggac attttcttcc aacaggtgga aaaggaggga gctactctaa ggctgagtgt 2940
aagtgcgggg cgggagcgtg gaggagctcg cccaccctat aattcctcct gcaccacatc 3000
tcctgtgggc tctgaccagg tcttgttttt gttctacccc agggagcgac agtgcccagg 3060
ggtctgagtc tcacagcttg taaaggtgag attctggggg tctgaagtgg gtggagggtg 3120
gggcagaggg gacaggactg ggttgtgggg attttttgat tcagaatttt tgagtgtgtg 3180
gtgggctgtt cagagtgtca tcacttaccg tgactgacct gaatttgttc atgactattt 3240
tcttctgtag cctgagacag ctgccttgtg tgcgactgag atgcacagct gccttgtgtg 3300
cgactgagat gc 3312
//