Dbfetch

ID   LR763079; SV 1; linear; genomic DNA; STD; HUM; 3312 BP.
XX
AC   LR763079;
XX
PR   Project:PRJEB36689;
XX
DT   24-NOV-2020 (Rel. 144, Created)
DT   24-NOV-2020 (Rel. 144, Last updated, Version 1)
XX
DE   Homo sapiens, HLA-E pseudogene, cell line DKMS-LSL_ID15647322_E_1, null
DE   allele HLA-E*01:new
XX
KW   .
XX
OS   Homo sapiens (human)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae;
OC   Homo.
XX
RN   [1]
RA   Albrecht V., Schmidt H. A., Klussmeier A., Lange V., Putke K.;
RT   ;
RL   Submitted (14-FEB-2020) to the INSDC.
RL   DKMS LIFE SCIENCE LAB, Research & Development, St. Petersburger Str. 2,
RL   Saxony, 01069 Dresden, Germany
XX
DR   MD5; 620a8dd8ed20bf38058a0700a466ae1b.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..3312
FT                   /organism="Homo sapiens"
FT                   /mol_type="genomic DNA"
FT                   /cell_line="DKMS-LSL_ID15647322_E_1"
FT                   /db_xref="taxon:9606"
FT   exon            1..98
FT                   /gene="HLA-E"
FT                   /allele="HLA-E*01:new"
FT                   /number=1
FT   CDS             join(35..98,229..498,743..1018,1640..1915,2039..2155,
FT                   2906..2938,3043..3085,3251..3255)
FT                   /codon_start=1
FT                   /transl_table=1
FT                   /gene="HLA-E"
FT                   /allele="HLA-E*01:new"
FT                   /note="MHC class I antigen null allele"
FT                   /pseudogene="allelic"
FT   intron          99..228
FT                   /gene="HLA-E"
FT                   /allele="HLA-E*01:new"
FT                   /number=1
FT   exon            229..498
FT                   /gene="HLA-E"
FT                   /allele="HLA-E*01:new"
FT                   /number=2
FT   intron          499..742
FT                   /gene="HLA-E"
FT                   /allele="HLA-E*01:new"
FT                   /number=2
FT   exon            743..1018
FT                   /gene="HLA-E"
FT                   /allele="HLA-E*01:new"
FT                   /number=3
FT   intron          1019..1639
FT                   /gene="HLA-E"
FT                   /allele="HLA-E*01:new"
FT                   /number=3
FT   exon            1640..1915
FT                   /gene="HLA-E"
FT                   /allele="HLA-E*01:new"
FT                   /number=4
FT   intron          1916..2038
FT                   /gene="HLA-E"
FT                   /allele="HLA-E*01:new"
FT                   /number=4
FT   exon            2039..2155
FT                   /gene="HLA-E"
FT                   /allele="HLA-E*01:new"
FT                   /number=5
FT   intron          2156..2905
FT                   /gene="HLA-E"
FT                   /allele="HLA-E*01:new"
FT                   /number=5
FT   exon            2906..2938
FT                   /gene="HLA-E"
FT                   /allele="HLA-E*01:new"
FT                   /number=6
FT   intron          2939..3042
FT                   /gene="HLA-E"
FT                   /allele="HLA-E*01:new"
FT                   /number=6
FT   exon            3043..3085
FT                   /gene="HLA-E"
FT                   /allele="HLA-E*01:new"
FT                   /number=7
FT   intron          3086..3250
FT                   /gene="HLA-E"
FT                   /allele="HLA-E*01:new"
FT                   /number=7
FT   exon            3251..3312
FT                   /gene="HLA-E"
FT                   /allele="HLA-E*01:new"
FT                   /number=8
XX
SQ   Sequence 3312 BP; 659 A; 932 C; 990 G; 731 T; 0 other;
     ctcaagaagt tctcaggact cagaggctgg gatcatggta gatggaaccc tccttttact        60
     cctctcggag gccctggccc ttacccagac ctgggcgggt gagtgcgggg tcgggatgga       120
     aacggcctct accgggagta gagaggggcc ggcccggcgg gggcgaagga ctcggggagc       180
     cgcgccggga ggagggtcgg gccgatctca gcccctcctc gcccccaggc tcccactcct       240
     tgaagtattt ccacacttcc gtgtcccggc ccggccgcgg ggagccccgc ttcatctctg       300
     tgggctacgt ggacgacacc cagttcgtgc gcttcgacaa cgacgccgcg agtccgagga       360
     tggtgccgcg ggcgccgtgg atggagcagg aggggtcaga gtattgggac cgggagacac       420
     ggagcgccag ggacaccgca cagattttcc gagtgaacgt gcggacgctg cgcggctact       480
     acaatcagag cgaggccggt gagtgacccc ggccagggga gcaggtcacg acccctcccc       540
     atcccccacg gacggcgcgg gtcccctcga atcttcgggt cccagattca ccccaaggct       600
     gcggaacccg cccagaccct agaccgggga gagtctcagg cgcctttacc cggttctttt       660
     tcagtttagg ccaaaatgcc cacagggtgg tggcgacggg ggcggggctt ggtgggcggg       720
     actgactaag gggcggggcc agggtctcac accctgcagt ggatgcatgg ctgcgagctg       780
     gggcccgaca ggcgcttcct ccgcgggtat gaacagttcg cctacgacgg caaggattat       840
     ctcaccctga atgaggacct gcgctcctgg accgcggtgg acacggcggc tcagatctcc       900
     gagcaaaagt caaatgatgc ctctgaggcg gagcaccaga gagcctacct ggaagacaca       960
     tgcgtggagt ggctccacaa atacctggag aaggggaagg agacgctgct tcacctgggt      1020
     aagagggtcc acagggctac tctcccatct ccttcttggg ctaggactgt gcccacagct      1080
     gacagacctc aaacagtaga agaaacaggg atggaggcca gaataccact cctcccttgg      1140
     atcaggagag ggagctgtca cctgaggtac aggagatcct ataccacaga gtgactctct      1200
     taaagggcca gacctctctc aggggcaatt aaggaatcta gtctcgctgg agattccatc      1260
     cttcagatga actgatgagc agttctcttt gactcccagt attaggaatc acgggggagt      1320
     ttctctcgtg cctgattctc agccccacac caagagtttt tggaggtctg actccagctt      1380
     ttctcagtca ctcagcatcc acacaggcca ggaccagaaa tcccttttca ccttctaccc      1440
     tgggctagct catcccgatt ctagaacttt ccaaggaata agaggctatc ccagatccct      1500
     aagtccaggc tggtgtcaag gttttgtcct cttctcctac tataattgtc ctcttccttc      1560
     tcaggatggt cacatgggtg ctgctggagt gtcccatgag agatacaaag tgcctgaatt      1620
     ttctgactct tcccctcaga gcccccaaag acacacgtga ctcaccaccc catctctgac      1680
     catgaggcca ccctgaggtg ctgggccctg ggcttctacc ctgcggagat cacactgacc      1740
     tggcagcagg atggggaggg ccatacccag gacacggagc tcgtggagac caggcctgca      1800
     ggggatggaa ccttccagaa gtgggcagct gtggtggtgc cttctggaga ggagcagaga      1860
     tacacgtgcc atgtgcagca tgaggggcta cccgagcccg tcaccctgag atggagtaag      1920
     gagggggatg ggaggtcatg tctcttctca gggaaagcgg gagcccttct ggagcccttc      1980
     cgcagggtca gggctgaggc ctgggggtca gggcccctta cgttccctct tttcccagag      2040
     ccggcttccc agcccaccat ccccatcgtg ggcatcattg ctggcctggt tctccttgga      2100
     tctgtggtct ctggagctgt ggttgctgct gtgatatgga ggaagaagag ctcaggtggg      2160
     gaagggagaa gggtggggtc tgagttttct tgtcccactg ggtgtttcaa gccctaggta      2220
     aaagtgtgtc ctgcctcgtt actgggaagc accatccaca cacacgagcc tacccagcct      2280
     ggggccctgt gtgccagcac ctactctttt tttttgagac ggagtcttgg ctctgtcacc      2340
     caggctggag tgcaatggcg tggtttcagc tcactgcaac ctccgcctcc caggttcaag      2400
     caattctcct gcctcagcct ccctagtagc tgggactaca catgcgtgcc accacacctg      2460
     gctaattttt ttttttgtat ttttagtgga gatggggttt cactatgttg gccaggctgg      2520
     tctcgaactc ctgactttgt gatctgcctg cctcggcctc ccaaagtgct gggattacag      2580
     tcgtgagcca ccgcacccag ccgcacctac tcttttgtaa agcacctgtg acaatgaagg      2640
     acagatttat caccttgacg attgtggtga tggggacctg atcccagcag tcacaggtca      2700
     caggggaagg tccctgctga agacagacct cagaagggca gttgatccag gacccacacc      2760
     tgctttcttc acgtttcctg atcctgccct gggtctgcag tcacagttca ggaaacttct      2820
     ctgggatcca aaactaggag gttcctctag gaccttatgg ccctgcctcc tccctggccc      2880
     ctcacaggac attttcttcc aacaggtgga aaaggaggga gctactctaa ggctgagtgt      2940
     aagtgcgggg cgggagcgtg gaggagctcg cccaccctat aattcctcct gcaccacatc      3000
     tcctgtgggc tctgaccagg tcttgttttt gttctacccc agggagcgac agtgcccagg      3060
     ggtctgagtc tcacagcttg taaaggtgag attctggggg tctgaagtgg gtggagggtg      3120
     gggcagaggg gacaggactg ggttgtgggg attttttgat tcagaatttt tgagtgtgtg      3180
     gtgggctgtt cagagtgtca tcacttaccg tgactgacct gaatttgttc atgactattt      3240
     tcttctgtag cctgagacag ctgccttgtg tgcgactgag atgcacagct gccttgtgtg      3300
     cgactgagat gc                                                          3312
//
ID   LR763209; SV 1; linear; genomic DNA; STD; HUM; 3312 BP.
XX
AC   LR763209;
XX
PR   Project:PRJEB36689;
XX
DT   24-NOV-2020 (Rel. 144, Created)
DT   24-NOV-2020 (Rel. 144, Last updated, Version 1)
XX
DE   Homo sapiens, HLA-E pseudogene, cell line DKMS-LSL_ID17441417_E_1, null
DE   allele HLA-E*01:new
XX
KW   .
XX
OS   Homo sapiens (human)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae;
OC   Homo.
XX
RN   [1]
RA   Albrecht V., Schmidt H. A., Klussmeier A., Lange V., Putke K.;
RT   ;
RL   Submitted (14-FEB-2020) to the INSDC.
RL   DKMS LIFE SCIENCE LAB, Research & Development, St. Petersburger Str. 2,
RL   Saxony, 01069 Dresden, Germany
XX
DR   MD5; 620a8dd8ed20bf38058a0700a466ae1b.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..3312
FT                   /organism="Homo sapiens"
FT                   /mol_type="genomic DNA"
FT                   /cell_line="DKMS-LSL_ID17441417_E_1"
FT                   /db_xref="taxon:9606"
FT   exon            1..98
FT                   /gene="HLA-E"
FT                   /allele="HLA-E*01:new"
FT                   /number=1
FT   CDS             join(35..98,229..498,743..1018,1640..1915,2039..2155,
FT                   2906..2938,3043..3085,3251..3255)
FT                   /codon_start=1
FT                   /transl_table=1
FT                   /gene="HLA-E"
FT                   /allele="HLA-E*01:new"
FT                   /note="MHC class I antigen null allele"
FT                   /pseudogene="allelic"
FT   intron          99..228
FT                   /gene="HLA-E"
FT                   /allele="HLA-E*01:new"
FT                   /number=1
FT   exon            229..498
FT                   /gene="HLA-E"
FT                   /allele="HLA-E*01:new"
FT                   /number=2
FT   intron          499..742
FT                   /gene="HLA-E"
FT                   /allele="HLA-E*01:new"
FT                   /number=2
FT   exon            743..1018
FT                   /gene="HLA-E"
FT                   /allele="HLA-E*01:new"
FT                   /number=3
FT   intron          1019..1639
FT                   /gene="HLA-E"
FT                   /allele="HLA-E*01:new"
FT                   /number=3
FT   exon            1640..1915
FT                   /gene="HLA-E"
FT                   /allele="HLA-E*01:new"
FT                   /number=4
FT   intron          1916..2038
FT                   /gene="HLA-E"
FT                   /allele="HLA-E*01:new"
FT                   /number=4
FT   exon            2039..2155
FT                   /gene="HLA-E"
FT                   /allele="HLA-E*01:new"
FT                   /number=5
FT   intron          2156..2905
FT                   /gene="HLA-E"
FT                   /allele="HLA-E*01:new"
FT                   /number=5
FT   exon            2906..2938
FT                   /gene="HLA-E"
FT                   /allele="HLA-E*01:new"
FT                   /number=6
FT   intron          2939..3042
FT                   /gene="HLA-E"
FT                   /allele="HLA-E*01:new"
FT                   /number=6
FT   exon            3043..3085
FT                   /gene="HLA-E"
FT                   /allele="HLA-E*01:new"
FT                   /number=7
FT   intron          3086..3250
FT                   /gene="HLA-E"
FT                   /allele="HLA-E*01:new"
FT                   /number=7
FT   exon            3251..3312
FT                   /gene="HLA-E"
FT                   /allele="HLA-E*01:new"
FT                   /number=8
XX
SQ   Sequence 3312 BP; 659 A; 932 C; 990 G; 731 T; 0 other;
     ctcaagaagt tctcaggact cagaggctgg gatcatggta gatggaaccc tccttttact        60
     cctctcggag gccctggccc ttacccagac ctgggcgggt gagtgcgggg tcgggatgga       120
     aacggcctct accgggagta gagaggggcc ggcccggcgg gggcgaagga ctcggggagc       180
     cgcgccggga ggagggtcgg gccgatctca gcccctcctc gcccccaggc tcccactcct       240
     tgaagtattt ccacacttcc gtgtcccggc ccggccgcgg ggagccccgc ttcatctctg       300
     tgggctacgt ggacgacacc cagttcgtgc gcttcgacaa cgacgccgcg agtccgagga       360
     tggtgccgcg ggcgccgtgg atggagcagg aggggtcaga gtattgggac cgggagacac       420
     ggagcgccag ggacaccgca cagattttcc gagtgaacgt gcggacgctg cgcggctact       480
     acaatcagag cgaggccggt gagtgacccc ggccagggga gcaggtcacg acccctcccc       540
     atcccccacg gacggcgcgg gtcccctcga atcttcgggt cccagattca ccccaaggct       600
     gcggaacccg cccagaccct agaccgggga gagtctcagg cgcctttacc cggttctttt       660
     tcagtttagg ccaaaatgcc cacagggtgg tggcgacggg ggcggggctt ggtgggcggg       720
     actgactaag gggcggggcc agggtctcac accctgcagt ggatgcatgg ctgcgagctg       780
     gggcccgaca ggcgcttcct ccgcgggtat gaacagttcg cctacgacgg caaggattat       840
     ctcaccctga atgaggacct gcgctcctgg accgcggtgg acacggcggc tcagatctcc       900
     gagcaaaagt caaatgatgc ctctgaggcg gagcaccaga gagcctacct ggaagacaca       960
     tgcgtggagt ggctccacaa atacctggag aaggggaagg agacgctgct tcacctgggt      1020
     aagagggtcc acagggctac tctcccatct ccttcttggg ctaggactgt gcccacagct      1080
     gacagacctc aaacagtaga agaaacaggg atggaggcca gaataccact cctcccttgg      1140
     atcaggagag ggagctgtca cctgaggtac aggagatcct ataccacaga gtgactctct      1200
     taaagggcca gacctctctc aggggcaatt aaggaatcta gtctcgctgg agattccatc      1260
     cttcagatga actgatgagc agttctcttt gactcccagt attaggaatc acgggggagt      1320
     ttctctcgtg cctgattctc agccccacac caagagtttt tggaggtctg actccagctt      1380
     ttctcagtca ctcagcatcc acacaggcca ggaccagaaa tcccttttca ccttctaccc      1440
     tgggctagct catcccgatt ctagaacttt ccaaggaata agaggctatc ccagatccct      1500
     aagtccaggc tggtgtcaag gttttgtcct cttctcctac tataattgtc ctcttccttc      1560
     tcaggatggt cacatgggtg ctgctggagt gtcccatgag agatacaaag tgcctgaatt      1620
     ttctgactct tcccctcaga gcccccaaag acacacgtga ctcaccaccc catctctgac      1680
     catgaggcca ccctgaggtg ctgggccctg ggcttctacc ctgcggagat cacactgacc      1740
     tggcagcagg atggggaggg ccatacccag gacacggagc tcgtggagac caggcctgca      1800
     ggggatggaa ccttccagaa gtgggcagct gtggtggtgc cttctggaga ggagcagaga      1860
     tacacgtgcc atgtgcagca tgaggggcta cccgagcccg tcaccctgag atggagtaag      1920
     gagggggatg ggaggtcatg tctcttctca gggaaagcgg gagcccttct ggagcccttc      1980
     cgcagggtca gggctgaggc ctgggggtca gggcccctta cgttccctct tttcccagag      2040
     ccggcttccc agcccaccat ccccatcgtg ggcatcattg ctggcctggt tctccttgga      2100
     tctgtggtct ctggagctgt ggttgctgct gtgatatgga ggaagaagag ctcaggtggg      2160
     gaagggagaa gggtggggtc tgagttttct tgtcccactg ggtgtttcaa gccctaggta      2220
     aaagtgtgtc ctgcctcgtt actgggaagc accatccaca cacacgagcc tacccagcct      2280
     ggggccctgt gtgccagcac ctactctttt tttttgagac ggagtcttgg ctctgtcacc      2340
     caggctggag tgcaatggcg tggtttcagc tcactgcaac ctccgcctcc caggttcaag      2400
     caattctcct gcctcagcct ccctagtagc tgggactaca catgcgtgcc accacacctg      2460
     gctaattttt ttttttgtat ttttagtgga gatggggttt cactatgttg gccaggctgg      2520
     tctcgaactc ctgactttgt gatctgcctg cctcggcctc ccaaagtgct gggattacag      2580
     tcgtgagcca ccgcacccag ccgcacctac tcttttgtaa agcacctgtg acaatgaagg      2640
     acagatttat caccttgacg attgtggtga tggggacctg atcccagcag tcacaggtca      2700
     caggggaagg tccctgctga agacagacct cagaagggca gttgatccag gacccacacc      2760
     tgctttcttc acgtttcctg atcctgccct gggtctgcag tcacagttca ggaaacttct      2820
     ctgggatcca aaactaggag gttcctctag gaccttatgg ccctgcctcc tccctggccc      2880
     ctcacaggac attttcttcc aacaggtgga aaaggaggga gctactctaa ggctgagtgt      2940
     aagtgcgggg cgggagcgtg gaggagctcg cccaccctat aattcctcct gcaccacatc      3000
     tcctgtgggc tctgaccagg tcttgttttt gttctacccc agggagcgac agtgcccagg      3060
     ggtctgagtc tcacagcttg taaaggtgag attctggggg tctgaagtgg gtggagggtg      3120
     gggcagaggg gacaggactg ggttgtgggg attttttgat tcagaatttt tgagtgtgtg      3180
     gtgggctgtt cagagtgtca tcacttaccg tgactgacct gaatttgttc atgactattt      3240
     tcttctgtag cctgagacag ctgccttgtg tgcgactgag atgcacagct gccttgtgtg      3300
     cgactgagat gc                                                          3312
//