Dbfetch
ID LR761915; SV 1; linear; genomic DNA; STD; HUM; 4111 BP.
XX
AC LR761915;
XX
PR Project:PRJEB36711;
XX
DT 24-NOV-2020 (Rel. 144, Created)
DT 24-NOV-2020 (Rel. 144, Last updated, Version 1)
XX
DE Homo sapiens, HLA-C gene for MHC class I antigen, cell line
DE DKMS-LSL_ID17285568_C_1, allele HLA-C*08:new
XX
KW .
XX
OS Homo sapiens (human)
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae;
OC Homo.
XX
RN [1]
RA Albrecht V., Schmidt H. A., Klussmeier A., Lange V., Putke K.;
RT ;
RL Submitted (14-FEB-2020) to the INSDC.
RL DKMS LIFE SCIENCE LAB, Research & Development, St. Petersburger Str. 2,
RL Saxony, 01069 Dresden, Germany
XX
DR MD5; 345276fa4029ceaedeea6f90f444acfe.
XX
FH Key Location/Qualifiers
FH
FT source 1..4111
FT /organism="Homo sapiens"
FT /mol_type="genomic DNA"
FT /cell_line="DKMS-LSL_ID17285568_C_1"
FT /db_xref="taxon:9606"
FT exon 1..568
FT /gene="HLA-C"
FT /allele="HLA-C*08:new"
FT /number=1
FT CDS join(496..568,699..968,1215..1490,2077..2352,2474..2593,
FT 3033..3065,3173..3220,3385..3389)
FT /codon_start=1
FT /transl_table=1
FT /gene="HLA-C"
FT /allele="HLA-C*08:new"
FT /product="MHC class I antigen"
FT /function="antigen presenting molecule"
FT /protein_id="CAA9893309.1"
FT /translation="MRVMAPRTLILLLSGALALTETWACSHSMRYFYTAVSRPGRGEPR
FT FIAVGYVDDTQFVQFDSDAASPRGEPRAPWVEQEGPEYWDRETQKYKRQAQTDRVSLRN
FT LRGYYNQSEAGSHTLQRMYGCDLGPDGRLLRGYNQFAYDGKDYIALNEDLRSWTAADKA
FT AQITQRKWEAAREAEQRRAYLEGTCVEWLRRYLENGKKTLQRAEHPKTHVTHHPVSDHE
FT ATLRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRY
FT TCHVQHEGLPEPLTLRWGPSSQPTIPIVGIVAGLAVLAVLAVLGAVMAVVMCRRKSSGG
FT KGGSCSQAASSNSAQGSDESLIACKA"
FT intron 569..698
FT /gene="HLA-C"
FT /allele="HLA-C*08:new"
FT /number=1
FT exon 699..968
FT /gene="HLA-C"
FT /allele="HLA-C*08:new"
FT /number=2
FT intron 969..1214
FT /gene="HLA-C"
FT /allele="HLA-C*08:new"
FT /number=2
FT exon 1215..1490
FT /gene="HLA-C"
FT /allele="HLA-C*08:new"
FT /number=3
FT intron 1491..2076
FT /gene="HLA-C"
FT /allele="HLA-C*08:new"
FT /number=3
FT exon 2077..2352
FT /gene="HLA-C"
FT /allele="HLA-C*08:new"
FT /number=4
FT intron 2353..2473
FT /gene="HLA-C"
FT /allele="HLA-C*08:new"
FT /number=4
FT exon 2474..2593
FT /gene="HLA-C"
FT /allele="HLA-C*08:new"
FT /number=5
FT intron 2594..3032
FT /gene="HLA-C"
FT /allele="HLA-C*08:new"
FT /number=5
FT exon 3033..3065
FT /gene="HLA-C"
FT /allele="HLA-C*08:new"
FT /number=6
FT intron 3066..3172
FT /gene="HLA-C"
FT /allele="HLA-C*08:new"
FT /number=6
FT exon 3173..3220
FT /gene="HLA-C"
FT /allele="HLA-C*08:new"
FT /number=7
FT intron 3221..3384
FT /gene="HLA-C"
FT /allele="HLA-C*08:new"
FT /number=7
FT exon 3385..4111
FT /gene="HLA-C"
FT /allele="HLA-C*08:new"
FT /number=8
XX
SQ Sequence 4111 BP; 798 A; 1156 C; 1254 G; 903 T; 0 other;
ttattttgct ggatgtagtt taatattacc tgaggtaagg taaggcaaag agtgggaggc 60
agggagtcca gttcagggac ggggattcca ggagaagtga aggggaaggg gctgggcgca 120
gcctgggggt ctctccctgg tttccacaga cagatccttg gccaggactc aggcacacag 180
tgtgacaaag atgcttggtg taggagaaga gggatcagga cgaagtccca ggtcccgggc 240
ggggctctca gggtctcagg ctccaagggc cgtgtctgca ctggggaggc gccgcgttga 300
ggattctcca ctcccctgag tttcacttct tcttccaacc tgcgtcgggt ccttcttcct 360
gaatactcat gacgcgtccc caattcccac tcccattggg tgtcgggttc tagagaagcc 420
aatcagcgtc tccgcagtcc cggttctaaa gtccccagtc acccacccgg actcggattc 480
tccccagacg ccgagatgcg ggtcatggcg ccccgaaccc tcatcctgct gctctcggga 540
gccctggccc tgaccgagac ctgggcctgt gagtgcgagg ttgggaggga aacggcctct 600
gcggagagga gcgaggggcc cgcccggcga gggcgcagga cccggggagc cgcgcaggga 660
ggagggtcgg gcgggtctca gcccctcctc gcccccaggc tcccactcca tgaggtattt 720
ctacaccgcc gtgtcccggc ccggccgcgg agagccccgc ttcatcgcag tgggctacgt 780
ggacgacacg cagttcgtgc agttcgacag cgacgccgcg agtccaagag gggagccgcg 840
ggcgccgtgg gtggagcagg aggggccgga gtattgggac cgggagacac agaagtacaa 900
gcgccaggca cagactgacc gagtgagcct gcggaacctg cgcggctact acaaccagag 960
cgaggccggt gagtgacccc ggcccggggc gcaggtcacg acccctcccc atcccccacg 1020
gacggcccgg gtcgccccga gtctcccggt ctgagatcca ccccgaggct gcggaacccg 1080
cccagaccct cgaccggaga gagccccagt cacctttacc cggtttcatt ttcagtttag 1140
gccaaaatcc ccgcgggttg gtcggggctg gggcggggct cgggggacgg ggctgaccac 1200
gggggcgggg ccagggtctc acaccctcca gaggatgtat ggctgcgacc tggggcccga 1260
cgggcgcctc ctccgcgggt ataaccagtt cgcctacgac ggcaaggatt acatcgccct 1320
gaatgaggac ctgcgctcct ggaccgccgc ggacaaggcg gctcagatca cccagcgcaa 1380
gtgggaggcg gcccgtgagg cggagcagcg gagagcctac ctggagggca cgtgcgtgga 1440
gtggctccgc agatacctgg agaacgggaa gaagacgctg cagcgcgcgg gtaccagggg 1500
cagtggggag ccttccccat ctcctgtaga tctccgggat ggcctcccac gaggagggga 1560
ggaaaatggg atcagcgctg gaatatcgcc ctcccttgaa tggagaatgg gatgagtttt 1620
cctgagtttc ttctgagggc cccctctgct ctctaggaca attaagggat gaagtccttg 1680
aggaaatgga ggggaagaca gtccctggaa tactgatcag gggtcccctt tgaccacttt 1740
gaccactgca gcagctgtgg tcaggctgct gacctttctc tcaggccttg ttctctgcct 1800
cacgctcaat gtgtttaaag gtttgattcc aacttttctg agtccttcgg cctccactca 1860
ggtcaggacc agaagtcgct gttcctccct cagagactag aactttccaa tgaataggag 1920
attatcccag gtgcctgtgt ccaggctggc gtctgggttc tgtgccccct tccccacccc 1980
aggtgtcctg tccattctca ggatggtcac atgggcactg ttggagtgtc gcaagagaga 2040
tacaaagtgt ctgaattttc tgactcttcc cgtcagaaca cccaaagaca cacgtgaccc 2100
accatcccgt ctctgaccat gaggccaccc tgaggtgctg ggccctgggc ttctaccctg 2160
cggagatcac actgacctgg cagcgggatg gcgaggacca aactcaggac accgagcttg 2220
tggagaccag gccagcagga gatggaacct tccagaagtg ggcagctgtg gtggtgcctt 2280
ctggagaaga gcagagatac acgtgccatg tgcagcacga ggggctgcca gagcccctca 2340
ccctgagatg gggtaaggag ggggatgagg ggtcatgtgt cttctcaggg aaagcagaag 2400
tcctggagcc cttcagccgg gtcagggctg aggcttgggg gtcagggccc ctcaccttcc 2460
cctcctttcc cagggccatc ttcccagccc accatcccca tcgtgggcat cgttgctggc 2520
ctggctgtcc tggctgtcct agctgtccta ggagctgtga tggctgttgt gatgtgtagg 2580
aggaagagct caggtaggga aggggtgagg agtggggtct gggttttctt gtcccactgg 2640
gagtttcaag ccccaggtag aagtgtgccc cacctcgtta ctggaagcac catccacaca 2700
tgggccatcc cagcctggga ccctgtgtgc tagcacttac tctgttgtga agcacatgac 2760
aatgaaggac agatgtatca ccttgatgat tatggtgttg gggtccttga ttccagcatt 2820
catgagtcag gggaaggtcc ctgctaagga cagaccttag gagggcagtt gctccagaac 2880
ccacagctgc tttccccgtg tttcctgatc ctgccctggg tctgcagtca tagttctgga 2940
aacttctctt gggtccaaga ctaggaggtt cccctaagat cgcatggccc tgcctcctcc 3000
ctgtcccctc acagggcatt ttcttcccac aggtggaaaa ggagggagct gctctcaggc 3060
tgcgtgtaag tgatggcggt gggcgtgtgg aggagctcac ccaccccata attcctcttg 3120
tcccacatct cctgcgggct ctgaccaggt cttttttttt gttctacccc agccagcaac 3180
agtgcccagg gctctgatga gtctctcatc gcttgtaaag gtgagattct ggggagctga 3240
agtggtcggg ggtggggcag agggaaaagg cctaggtaat ggggatcctt tgattgggac 3300
gtttcgaatg tgtggtgagc tgttcagagt gtcatcactt accatgactg acctgaattt 3360
gttcatgact attgtgttct gtagcctgag acagctgcct gtgtgggact gagatgcagg 3420
atttcttcac acctttcctt tgtgacttca agagcctctg gcatctcttt ctgcaaaggc 3480
atctgaatgt gtctgcgttc ctgttagcat aatgtgagga ggtggagaga cagcccaccc 3540
ccgtgtccac cgtgacccct gtccccacac tgacctgtgt tccctccccg atcatctttc 3600
ctgttccaga gaagtgggct ggatgtctcc atctctgtct caactttacg tgtactgagc 3660
tgcaacttct tacttcccta ctgaaaataa gaatctgaat ataaatttgt tttctcaaat 3720
atttgctatg agaggttgat ggattaatta aataagtcaa ttcctggaag ttgagagagc 3780
aaataaagac ctgagaacct tccagaatcc gcatgttcgc tgtgctgagt ctgttgcagg 3840
tgggggtggg gaaggctgtg aggagacgag tgtggacggg gcctgtgcct agttgctgtt 3900
cagttcttca tgggctttat gtggtcagtc ctcagctggg tcaccttcac tgctccattg 3960
tccttgtccc ttcagtggaa acttgtccag cgggagctgt gaccacagag gctcacacat 4020
cgcccagggc agcccctgca cacgggagtc cctgtgcttt ctgagacaaa ttttcagacc 4080
cattcagctc ctgccctcct tctagggctc c 4111
//
ID LR761916; SV 1; linear; genomic DNA; STD; HUM; 4111 BP.
XX
AC LR761916;
XX
PR Project:PRJEB36711;
XX
DT 24-NOV-2020 (Rel. 144, Created)
DT 24-NOV-2020 (Rel. 144, Last updated, Version 1)
XX
DE Homo sapiens, HLA-C gene for MHC class I antigen, cell line
DE DKMS-LSL_ID17286577_C_1, allele HLA-C*08:new
XX
KW .
XX
OS Homo sapiens (human)
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae;
OC Homo.
XX
RN [1]
RA Albrecht V., Schmidt H. A., Klussmeier A., Lange V., Putke K.;
RT ;
RL Submitted (14-FEB-2020) to the INSDC.
RL DKMS LIFE SCIENCE LAB, Research & Development, St. Petersburger Str. 2,
RL Saxony, 01069 Dresden, Germany
XX
DR MD5; 345276fa4029ceaedeea6f90f444acfe.
XX
FH Key Location/Qualifiers
FH
FT source 1..4111
FT /organism="Homo sapiens"
FT /mol_type="genomic DNA"
FT /cell_line="DKMS-LSL_ID17286577_C_1"
FT /db_xref="taxon:9606"
FT exon 1..568
FT /gene="HLA-C"
FT /allele="HLA-C*08:new"
FT /number=1
FT CDS join(496..568,699..968,1215..1490,2077..2352,2474..2593,
FT 3033..3065,3173..3220,3385..3389)
FT /codon_start=1
FT /transl_table=1
FT /gene="HLA-C"
FT /allele="HLA-C*08:new"
FT /product="MHC class I antigen"
FT /function="antigen presenting molecule"
FT /protein_id="CAA9893310.1"
FT /translation="MRVMAPRTLILLLSGALALTETWACSHSMRYFYTAVSRPGRGEPR
FT FIAVGYVDDTQFVQFDSDAASPRGEPRAPWVEQEGPEYWDRETQKYKRQAQTDRVSLRN
FT LRGYYNQSEAGSHTLQRMYGCDLGPDGRLLRGYNQFAYDGKDYIALNEDLRSWTAADKA
FT AQITQRKWEAAREAEQRRAYLEGTCVEWLRRYLENGKKTLQRAEHPKTHVTHHPVSDHE
FT ATLRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRY
FT TCHVQHEGLPEPLTLRWGPSSQPTIPIVGIVAGLAVLAVLAVLGAVMAVVMCRRKSSGG
FT KGGSCSQAASSNSAQGSDESLIACKA"
FT intron 569..698
FT /gene="HLA-C"
FT /allele="HLA-C*08:new"
FT /number=1
FT exon 699..968
FT /gene="HLA-C"
FT /allele="HLA-C*08:new"
FT /number=2
FT intron 969..1214
FT /gene="HLA-C"
FT /allele="HLA-C*08:new"
FT /number=2
FT exon 1215..1490
FT /gene="HLA-C"
FT /allele="HLA-C*08:new"
FT /number=3
FT intron 1491..2076
FT /gene="HLA-C"
FT /allele="HLA-C*08:new"
FT /number=3
FT exon 2077..2352
FT /gene="HLA-C"
FT /allele="HLA-C*08:new"
FT /number=4
FT intron 2353..2473
FT /gene="HLA-C"
FT /allele="HLA-C*08:new"
FT /number=4
FT exon 2474..2593
FT /gene="HLA-C"
FT /allele="HLA-C*08:new"
FT /number=5
FT intron 2594..3032
FT /gene="HLA-C"
FT /allele="HLA-C*08:new"
FT /number=5
FT exon 3033..3065
FT /gene="HLA-C"
FT /allele="HLA-C*08:new"
FT /number=6
FT intron 3066..3172
FT /gene="HLA-C"
FT /allele="HLA-C*08:new"
FT /number=6
FT exon 3173..3220
FT /gene="HLA-C"
FT /allele="HLA-C*08:new"
FT /number=7
FT intron 3221..3384
FT /gene="HLA-C"
FT /allele="HLA-C*08:new"
FT /number=7
FT exon 3385..4111
FT /gene="HLA-C"
FT /allele="HLA-C*08:new"
FT /number=8
XX
SQ Sequence 4111 BP; 798 A; 1156 C; 1254 G; 903 T; 0 other;
ttattttgct ggatgtagtt taatattacc tgaggtaagg taaggcaaag agtgggaggc 60
agggagtcca gttcagggac ggggattcca ggagaagtga aggggaaggg gctgggcgca 120
gcctgggggt ctctccctgg tttccacaga cagatccttg gccaggactc aggcacacag 180
tgtgacaaag atgcttggtg taggagaaga gggatcagga cgaagtccca ggtcccgggc 240
ggggctctca gggtctcagg ctccaagggc cgtgtctgca ctggggaggc gccgcgttga 300
ggattctcca ctcccctgag tttcacttct tcttccaacc tgcgtcgggt ccttcttcct 360
gaatactcat gacgcgtccc caattcccac tcccattggg tgtcgggttc tagagaagcc 420
aatcagcgtc tccgcagtcc cggttctaaa gtccccagtc acccacccgg actcggattc 480
tccccagacg ccgagatgcg ggtcatggcg ccccgaaccc tcatcctgct gctctcggga 540
gccctggccc tgaccgagac ctgggcctgt gagtgcgagg ttgggaggga aacggcctct 600
gcggagagga gcgaggggcc cgcccggcga gggcgcagga cccggggagc cgcgcaggga 660
ggagggtcgg gcgggtctca gcccctcctc gcccccaggc tcccactcca tgaggtattt 720
ctacaccgcc gtgtcccggc ccggccgcgg agagccccgc ttcatcgcag tgggctacgt 780
ggacgacacg cagttcgtgc agttcgacag cgacgccgcg agtccaagag gggagccgcg 840
ggcgccgtgg gtggagcagg aggggccgga gtattgggac cgggagacac agaagtacaa 900
gcgccaggca cagactgacc gagtgagcct gcggaacctg cgcggctact acaaccagag 960
cgaggccggt gagtgacccc ggcccggggc gcaggtcacg acccctcccc atcccccacg 1020
gacggcccgg gtcgccccga gtctcccggt ctgagatcca ccccgaggct gcggaacccg 1080
cccagaccct cgaccggaga gagccccagt cacctttacc cggtttcatt ttcagtttag 1140
gccaaaatcc ccgcgggttg gtcggggctg gggcggggct cgggggacgg ggctgaccac 1200
gggggcgggg ccagggtctc acaccctcca gaggatgtat ggctgcgacc tggggcccga 1260
cgggcgcctc ctccgcgggt ataaccagtt cgcctacgac ggcaaggatt acatcgccct 1320
gaatgaggac ctgcgctcct ggaccgccgc ggacaaggcg gctcagatca cccagcgcaa 1380
gtgggaggcg gcccgtgagg cggagcagcg gagagcctac ctggagggca cgtgcgtgga 1440
gtggctccgc agatacctgg agaacgggaa gaagacgctg cagcgcgcgg gtaccagggg 1500
cagtggggag ccttccccat ctcctgtaga tctccgggat ggcctcccac gaggagggga 1560
ggaaaatggg atcagcgctg gaatatcgcc ctcccttgaa tggagaatgg gatgagtttt 1620
cctgagtttc ttctgagggc cccctctgct ctctaggaca attaagggat gaagtccttg 1680
aggaaatgga ggggaagaca gtccctggaa tactgatcag gggtcccctt tgaccacttt 1740
gaccactgca gcagctgtgg tcaggctgct gacctttctc tcaggccttg ttctctgcct 1800
cacgctcaat gtgtttaaag gtttgattcc aacttttctg agtccttcgg cctccactca 1860
ggtcaggacc agaagtcgct gttcctccct cagagactag aactttccaa tgaataggag 1920
attatcccag gtgcctgtgt ccaggctggc gtctgggttc tgtgccccct tccccacccc 1980
aggtgtcctg tccattctca ggatggtcac atgggcactg ttggagtgtc gcaagagaga 2040
tacaaagtgt ctgaattttc tgactcttcc cgtcagaaca cccaaagaca cacgtgaccc 2100
accatcccgt ctctgaccat gaggccaccc tgaggtgctg ggccctgggc ttctaccctg 2160
cggagatcac actgacctgg cagcgggatg gcgaggacca aactcaggac accgagcttg 2220
tggagaccag gccagcagga gatggaacct tccagaagtg ggcagctgtg gtggtgcctt 2280
ctggagaaga gcagagatac acgtgccatg tgcagcacga ggggctgcca gagcccctca 2340
ccctgagatg gggtaaggag ggggatgagg ggtcatgtgt cttctcaggg aaagcagaag 2400
tcctggagcc cttcagccgg gtcagggctg aggcttgggg gtcagggccc ctcaccttcc 2460
cctcctttcc cagggccatc ttcccagccc accatcccca tcgtgggcat cgttgctggc 2520
ctggctgtcc tggctgtcct agctgtccta ggagctgtga tggctgttgt gatgtgtagg 2580
aggaagagct caggtaggga aggggtgagg agtggggtct gggttttctt gtcccactgg 2640
gagtttcaag ccccaggtag aagtgtgccc cacctcgtta ctggaagcac catccacaca 2700
tgggccatcc cagcctggga ccctgtgtgc tagcacttac tctgttgtga agcacatgac 2760
aatgaaggac agatgtatca ccttgatgat tatggtgttg gggtccttga ttccagcatt 2820
catgagtcag gggaaggtcc ctgctaagga cagaccttag gagggcagtt gctccagaac 2880
ccacagctgc tttccccgtg tttcctgatc ctgccctggg tctgcagtca tagttctgga 2940
aacttctctt gggtccaaga ctaggaggtt cccctaagat cgcatggccc tgcctcctcc 3000
ctgtcccctc acagggcatt ttcttcccac aggtggaaaa ggagggagct gctctcaggc 3060
tgcgtgtaag tgatggcggt gggcgtgtgg aggagctcac ccaccccata attcctcttg 3120
tcccacatct cctgcgggct ctgaccaggt cttttttttt gttctacccc agccagcaac 3180
agtgcccagg gctctgatga gtctctcatc gcttgtaaag gtgagattct ggggagctga 3240
agtggtcggg ggtggggcag agggaaaagg cctaggtaat ggggatcctt tgattgggac 3300
gtttcgaatg tgtggtgagc tgttcagagt gtcatcactt accatgactg acctgaattt 3360
gttcatgact attgtgttct gtagcctgag acagctgcct gtgtgggact gagatgcagg 3420
atttcttcac acctttcctt tgtgacttca agagcctctg gcatctcttt ctgcaaaggc 3480
atctgaatgt gtctgcgttc ctgttagcat aatgtgagga ggtggagaga cagcccaccc 3540
ccgtgtccac cgtgacccct gtccccacac tgacctgtgt tccctccccg atcatctttc 3600
ctgttccaga gaagtgggct ggatgtctcc atctctgtct caactttacg tgtactgagc 3660
tgcaacttct tacttcccta ctgaaaataa gaatctgaat ataaatttgt tttctcaaat 3720
atttgctatg agaggttgat ggattaatta aataagtcaa ttcctggaag ttgagagagc 3780
aaataaagac ctgagaacct tccagaatcc gcatgttcgc tgtgctgagt ctgttgcagg 3840
tgggggtggg gaaggctgtg aggagacgag tgtggacggg gcctgtgcct agttgctgtt 3900
cagttcttca tgggctttat gtggtcagtc ctcagctggg tcaccttcac tgctccattg 3960
tccttgtccc ttcagtggaa acttgtccag cgggagctgt gaccacagag gctcacacat 4020
cgcccagggc agcccctgca cacgggagtc cctgtgcttt ctgagacaaa ttttcagacc 4080
cattcagctc ctgccctcct tctagggctc c 4111
//