Dbfetch

ID   LR761914; SV 1; linear; genomic DNA; STD; HUM; 4111 BP.
XX
AC   LR761914;
XX
PR   Project:PRJEB36711;
XX
DT   24-NOV-2020 (Rel. 144, Created)
DT   24-NOV-2020 (Rel. 144, Last updated, Version 1)
XX
DE   Homo sapiens, HLA-C gene for MHC class I antigen, cell line
DE   DKMS-LSL_ID16808106_C_1, allele HLA-C*06:new
XX
KW   .
XX
OS   Homo sapiens (human)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae;
OC   Homo.
XX
RN   [1]
RA   Albrecht V., Schmidt H. A., Klussmeier A., Lange V., Putke K.;
RT   ;
RL   Submitted (14-FEB-2020) to the INSDC.
RL   DKMS LIFE SCIENCE LAB, Research & Development, St. Petersburger Str. 2,
RL   Saxony, 01069 Dresden, Germany
XX
DR   MD5; c69945cdb1bf546d345f05ab345e76e1.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..4111
FT                   /organism="Homo sapiens"
FT                   /mol_type="genomic DNA"
FT                   /cell_line="DKMS-LSL_ID16808106_C_1"
FT                   /db_xref="taxon:9606"
FT   exon            1..568
FT                   /gene="HLA-C"
FT                   /allele="HLA-C*06:new"
FT                   /number=1
FT   CDS             join(496..568,699..968,1214..1489,2077..2352,2474..2593,
FT                   3033..3065,3173..3220,3385..3389)
FT                   /codon_start=1
FT                   /transl_table=1
FT                   /gene="HLA-C"
FT                   /allele="HLA-C*06:new"
FT                   /product="MHC class I antigen"
FT                   /function="antigen presenting molecule"
FT                   /protein_id="CAA9893308.1"
FT                   /translation="MRVMAPRTLILLLSGALALTETWACSHSMRYFDTAVSRPGRGEPR
FT                   FISVGYVDDTQFVRFDSDAASPRGEPRAPWVEQEGPEYWDRETQKYKRQAQADRVNLRK
FT                   LRGYYNQSEDGSHTLQWMYGCDLGPDGRLLRGYDQSAYDGKDYIALNEDLRSWTAADTA
FT                   AQITQRKWEAAREAEQWRAYLEGTCVEWLRRYLENGKETLQRAEHPKTHVTHHPVSDHE
FT                   ATLRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRY
FT                   TCHVQHEGLPEPLTLRWEPSSQPTIPIVGIVAGLAVLAVLAVLGAVMAVVMCRRKSSGG
FT                   KGGSCSQAASSNSAQGSDESLIACKA"
FT   intron          569..698
FT                   /gene="HLA-C"
FT                   /allele="HLA-C*06:new"
FT                   /number=1
FT   exon            699..968
FT                   /gene="HLA-C"
FT                   /allele="HLA-C*06:new"
FT                   /number=2
FT   intron          969..1213
FT                   /gene="HLA-C"
FT                   /allele="HLA-C*06:new"
FT                   /number=2
FT   exon            1214..1489
FT                   /gene="HLA-C"
FT                   /allele="HLA-C*06:new"
FT                   /number=3
FT   intron          1490..2076
FT                   /gene="HLA-C"
FT                   /allele="HLA-C*06:new"
FT                   /number=3
FT   exon            2077..2352
FT                   /gene="HLA-C"
FT                   /allele="HLA-C*06:new"
FT                   /number=4
FT   intron          2353..2473
FT                   /gene="HLA-C"
FT                   /allele="HLA-C*06:new"
FT                   /number=4
FT   exon            2474..2593
FT                   /gene="HLA-C"
FT                   /allele="HLA-C*06:new"
FT                   /number=5
FT   intron          2594..3032
FT                   /gene="HLA-C"
FT                   /allele="HLA-C*06:new"
FT                   /number=5
FT   exon            3033..3065
FT                   /gene="HLA-C"
FT                   /allele="HLA-C*06:new"
FT                   /number=6
FT   intron          3066..3172
FT                   /gene="HLA-C"
FT                   /allele="HLA-C*06:new"
FT                   /number=6
FT   exon            3173..3220
FT                   /gene="HLA-C"
FT                   /allele="HLA-C*06:new"
FT                   /number=7
FT   intron          3221..3384
FT                   /gene="HLA-C"
FT                   /allele="HLA-C*06:new"
FT                   /number=7
FT   exon            3385..4111
FT                   /gene="HLA-C"
FT                   /allele="HLA-C*06:new"
FT                   /number=8
XX
SQ   Sequence 4111 BP; 792 A; 1160 C; 1257 G; 902 T; 0 other;
     ttattttgct ggatgtagtt taatattacc tgaggtaagg taaggcaaag agtgggaggc        60
     agggagtcca gttcagggac ggggattcca ggagaagtga aggggaaggg gctgggcgca       120
     gcctgggggt ctctccctgg tttccacaga cagatccttg gccaggactc aggcacacag       180
     tgtgacaaag atgcttggtg taggagaaga gggatcagga cgaagtccca ggtcccgggc       240
     ggggctctca gggtctcagg ctccaagggc cgtgtctgca ctggggaggc gccgcgttga       300
     ggattctcca ctcccctgag tttcacttct tctcccaacc tgcgtcgggt ccttcttcct       360
     gaatactcat gacgcgtccc caattcccac tcccattggg tgtcgggttc tagagaagcc       420
     aatcagcgtc tccgcagtcc cggttctaaa gtccccagtc acccacccgg actcggattc       480
     tccccagacg ccgagatgcg ggtcatggcg ccccgaaccc tcatcctgct gctctcggga       540
     gccctggccc tgaccgagac ctgggcctgt gagtgcgggg ttgggaggga aacggcctct       600
     gcggagagga gcgaggggcc cgcccggcga gggcgcagga cccggggagc cgcgcaggga       660
     ggtgggtcgg gcgggtctca gcccctcctc gcccccaggc tcccactcca tgaggtattt       720
     cgacaccgcc gtgtcccggc ccggccgcgg agagccccgc ttcatctcag tgggctacgt       780
     ggacgacacg cagttcgtgc ggttcgacag cgacgccgcg agtccgagag gggagccccg       840
     ggcgccgtgg gtggagcagg aggggccgga gtattgggac cgggagacac agaagtacaa       900
     gcgccaggca caggctgacc gagtgaacct gcggaaactg cgcggctact acaaccagag       960
     cgaggacggt gagtgacccg gcccggggcg caggtcacga cccctcccca tcccccacgg      1020
     acggcccggg tcgccccgag tctcccggtc tgagatccac cccgaggctg cggaacccgc      1080
     ccagaccctc gaccggagag agccccagtc acctttaccc ggtttcattt tcagtttagg      1140
     ccaaaatccc cgcgggttgg tcggggctgg ggcggggctc gggggacggg gctgaccacg      1200
     ggggcggggc cagggtctca caccctccag tggatgtatg gctgcgacct ggggcccgac      1260
     gggcgcctcc tccgcgggta tgaccagtcc gcctacgacg gcaaggatta catcgccctg      1320
     aacgaggacc tgcgctcctg gaccgccgcg gacacggcgg ctcagatcac ccagcgcaag      1380
     tgggaggcgg cccgtgaggc ggagcagtgg agagcctacc tggagggcac gtgcgtggag      1440
     tggctccgca gatacctgga gaacgggaag gagacgctgc agcgcgcggg taccaggggc      1500
     agtggggagc cttccccatc tcctgtagat ctcccgggat ggcctcccac gaggagggga      1560
     ggaaaatggg atcagcgcta gaatatcgcc ctcccttgaa tggagaatgg gatgagtttt      1620
     cctgagtttc ctctgagggc cccctctgct ctctaggaca attaagggat gaagtccttg      1680
     aggaaatgga ggggaagaca gtccctggaa tactgatcag gggtcccctt tgaccacttt      1740
     gaccactgca gcagctgtgg tcaggctgct gacctttctc tcaggccttg ttctctgcct      1800
     cacgctcaat gtgtttaaag gtttgattcc agcttttctg agtccttcgg cctccactca      1860
     ggtcaggacc agaagtcgct gttcctccct cagagactag aactttccaa tgaataggag      1920
     attatcccag gtgcctgtgt ccaggctggc gtctgggttc tgtgccccct tccccacccc      1980
     aggtgtcctg tccattctca ggatggtcac atgggcgctg ttggagtgtc gcaagagaga      2040
     tacaaagtgt ctgaattttc tgactcttcc cgtcagaaca cccaaagaca cacgtgaccc      2100
     accatcccgt ctctgaccat gaggccaccc tgaggtgctg ggccctgggc ttctaccctg      2160
     cggagatcac actgacctgg cagcgggatg gcgaggacca aactcaggac accgagcttg      2220
     tggagaccag gccagcagga gatggaacct tccagaagtg ggcagctgtg gtggtgcctt      2280
     ctggagaaga gcagagatac acgtgccatg tgcagcacga ggggctgcca gagcccctca      2340
     ccctgagatg gggtaaggag ggggatgagg ggtcatgtgt cttctcaggg aaagcagaag      2400
     tcctggagcc cttcagccgg gtcagggctg aggcttgggg gtcagggccc ctcaccttcc      2460
     cctcctttcc cagagccatc ttcccagccc accatcccca tcgtgggcat cgttgctggc      2520
     ctggctgtcc tggctgtcct agctgtccta ggagctgtga tggctgttgt gatgtgtagg      2580
     aggaagagct caggtaggga aggggtgagg agtggggtct gggttttctt gtcccactgg      2640
     gagtttcaag ccccaggtag aagtgtgccc cacctcgtta ctggaagcac catccacaca      2700
     tgggccatcc cagcctggga ccctgtgtgc tagcacttac tctgttgtga agcacatgac      2760
     aatgaaggac agatgtatca ccttgatgat tatggtgttg gggtccttga ttccagcatt      2820
     catgagtcag gggaaggtcc ctgctaagga cagaccttag gagggcagtt gctccagaac      2880
     ccacagctgc tttccccgtg tttcctgatc ctgccctggg tctgcagtca tagttctgga      2940
     aacttctctt gggtccaaga ctaggaggtt cccctaagat cgcatggccc tgcctcctcc      3000
     ctgtcccctc acagggcatt ttcttcccac aggtggaaaa ggagggagct gctctcaggc      3060
     tgcgtgtaag tgatggcggt gggcgtgtgg aggagctcac ccaccccata attcctcttg      3120
     tcccacatct cctgcgggct ctgaccaggt cttttttttt gttctacccc agccagcaac      3180
     agtgcccagg gctctgatga gtctctcatc gcttgtaaag gtgagattct ggggagctga      3240
     agtggtctgg ggtggggcag agggaaaagg cctaggtaat ggggatcctt tgattgggac      3300
     gtttcgaatg tgtggtgagc tgttcagagt gtcatcactt accatgactg acctgaattt      3360
     gttcatgact attgtgttct gtagcctgag acagctgcct gtgtgggact gagatgcagg      3420
     atttcttcac acctctcctt tgtgacttca agagcctctg gcatctcttt ctgcaaaggc      3480
     atctgaatgt gtctgcgttc ctgttagcat aatgtgagga ggtggagaga cagcccaccc      3540
     ccgtgtccac cgtgacccct gtccccacac tgacctgtgt tccctccccg atcatctttc      3600
     ctgttccaga gaagtgggct ggatgtctcc atctctgtct caactttacg tgtactgagc      3660
     tgcaacttct tacttcccta ctgaaaataa gaatctgaat ataaatttgt tttctcaaat      3720
     atttgctatg agaggttgat ggattaatta aataagtcaa ttcctggaag ttgagagagc      3780
     aaataaagac ctgagaacct tccagaatcc gcatgttcgc tgtgctgagt ctgttgcagg      3840
     tgggggtggg gaaggctgtg aggagacgag tgtggacggg gcctgtgcct agttgctgtt      3900
     cagttcttca tgggctttat gtggtcagtc ctcagctggg tcaccttcac tgctccattg      3960
     tccttgtccc ttcagtggaa acttgtccag cgggagctgt gaccacagag gctcacacat      4020
     cgcccagggc agcccctgca cacgggagtc cctgtgcttt ctgagacaaa ttttcagacc      4080
     cattcagctc ctgccctcct tctagggctc c                                     4111
//