Dbfetch
ID LR761882; SV 1; linear; genomic DNA; STD; HUM; 4124 BP.
XX
AC LR761882;
XX
PR Project:PRJEB36711;
XX
DT 24-NOV-2020 (Rel. 144, Created)
DT 24-NOV-2020 (Rel. 144, Last updated, Version 1)
XX
DE Homo sapiens, HLA-C gene for MHC class I antigen, cell line
DE DKMS-LSL_ID17264546_C_1, allele HLA-C*07:new
XX
KW .
XX
OS Homo sapiens (human)
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae;
OC Homo.
XX
RN [1]
RA Albrecht V., Schmidt H. A., Klussmeier A., Lange V., Putke K.;
RT ;
RL Submitted (14-FEB-2020) to the INSDC.
RL DKMS LIFE SCIENCE LAB, Research & Development, St. Petersburger Str. 2,
RL Saxony, 01069 Dresden, Germany
XX
DR MD5; aad1c1a181a0a41f0b8c8cf3190b0564.
XX
FH Key Location/Qualifiers
FH
FT source 1..4124
FT /organism="Homo sapiens"
FT /mol_type="genomic DNA"
FT /cell_line="DKMS-LSL_ID17264546_C_1"
FT /db_xref="taxon:9606"
FT exon 1..573
FT /gene="HLA-C"
FT /allele="HLA-C*07:new"
FT /number=1
FT CDS join(501..573,704..973,1224..1496,2084..2359,2484..2603,
FT 3044..3076,3184..3231,3396..3400)
FT /codon_start=1
FT /transl_table=1
FT /gene="HLA-C"
FT /allele="HLA-C*07:new"
FT /product="MHC class I antigen"
FT /function="antigen presenting molecule"
FT /protein_id="CAA9893276.1"
FT /translation="MRVMAPRALLLLLSGGLALTETWACSHSMRYFDTAVSRPGRGEPR
FT FISVGYVDDTQFVRFDSDAASPRGEPRAPWVEQEGPEYWDRETQKYKRQAQADRVSLRN
FT LRGYYNQSEDGSHTLQRMSGCDLGPDGRLLRGYDQSAYDGKDYIALNEDLRSWTAADTA
FT AQITQRKLEAARAAEQLRAYLEGTCVEWLRRYLENGETLQRAEPPKTHVTHHPLSDHEA
FT TLRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDGTFQKWAAVVVPSGQEQRYT
FT CHMQHEGLQEPLTLSWEPSSQPTIPIMGIVAGLAVLVVLAVLGAVVTAMMCRRKSSGGK
FT GGSCSQAACSNSAQGSDESLITCKA"
FT intron 574..703
FT /gene="HLA-C"
FT /allele="HLA-C*07:new"
FT /number=1
FT exon 704..973
FT /gene="HLA-C"
FT /allele="HLA-C*07:new"
FT /number=2
FT intron 974..1223
FT /gene="HLA-C"
FT /allele="HLA-C*07:new"
FT /number=2
FT exon 1224..1496
FT /gene="HLA-C"
FT /allele="HLA-C*07:new"
FT /number=3
FT intron 1497..2083
FT /gene="HLA-C"
FT /allele="HLA-C*07:new"
FT /number=3
FT exon 2084..2359
FT /gene="HLA-C"
FT /allele="HLA-C*07:new"
FT /number=4
FT intron 2360..2483
FT /gene="HLA-C"
FT /allele="HLA-C*07:new"
FT /number=4
FT exon 2484..2603
FT /gene="HLA-C"
FT /allele="HLA-C*07:new"
FT /number=5
FT intron 2604..3043
FT /gene="HLA-C"
FT /allele="HLA-C*07:new"
FT /number=5
FT exon 3044..3076
FT /gene="HLA-C"
FT /allele="HLA-C*07:new"
FT /number=6
FT intron 3077..3183
FT /gene="HLA-C"
FT /allele="HLA-C*07:new"
FT /number=6
FT exon 3184..3231
FT /gene="HLA-C"
FT /allele="HLA-C*07:new"
FT /number=7
FT intron 3232..3395
FT /gene="HLA-C"
FT /allele="HLA-C*07:new"
FT /number=7
FT exon 3396..4124
FT /gene="HLA-C"
FT /allele="HLA-C*07:new"
FT /number=8
XX
SQ Sequence 4124 BP; 788 A; 1171 C; 1261 G; 904 T; 0 other;
ttattttgct ggatgtagtt taatattacc tgaggtgagg taaggtaagg caaagggtgg 60
gaggcaggga gtccagttca gggacgggga ttccaggagg agaagtgaag gggaaggggc 120
tgggcgcagc cttggggtct ctccctggtt tccacagaca gatccttgtc caggactcag 180
gcacacagtg tgacaaagat gcttggtgta ggagaagagg gatcaggacg aagtcccagg 240
tcccgggcgg ggctctcagg gtctcaggct ccaagggccg tgtctgcatt ggggaggcgc 300
cgcgttgggg attctccact cccctgagtt tcacttctcc caacctgcgt cgggtccttc 360
ttcctgaata ctcatgacgc gtccccaatt cccactccca ttgggtgtcg ggttctagag 420
aagccaatca gcgtctccgc agtcccggtt ctaaagtccc cagtcaccca cccggactca 480
cattctcccc agaggccgag atgcgggtca tggcgccccg agccctcctc ctgctgctct 540
cgggaggcct ggccctgacc gagacctggg cctgtgagtg cggggttggg agggaagcgg 600
cctctgcgga gaggagcgag gggccctccc ggcgagggcg caggacccgg ggagccgcgc 660
agggaggtgg gtcgggcggg tctcagcccc tcctcgcccc caggctccca ctccatgagg 720
tatttcgaca ccgccgtgtc ccggcccggc cgcggagagc cccgcttcat ctcagtgggc 780
tacgtggacg acacgcagtt cgtgcggttc gacagcgacg ccgcgagtcc gagaggggag 840
ccgcgggcgc cgtgggtgga gcaggagggg ccggagtatt gggaccggga gacacagaag 900
tacaagcgcc aggcacaggc tgaccgagtg agcctgcgga acctgcgcgg ctactacaac 960
cagagcgagg acggtgagtg accccggccc ggggcgcagg tcacgacccc tccccatccc 1020
ccacggacgg cccgggtcgc ccagagtctc cccgtctgag atccacccca aggtggatct 1080
gcggaacccg cccagaccct cgaccggaga gagccccagt cgcctttacc cggtttcatt 1140
ttcggtttag gccaaaatcc ccgcgggttg gtcggggcgg ggcggggctc gggggactgg 1200
gctgaccgcg ggggcggggc cagggtctca caccctccag aggatgtctg gctgcgacct 1260
ggggcccgac gggcgcctcc tccgcgggta tgaccagtcc gcctacgacg gcaaggatta 1320
catcgccctg aacgaggacc tgcgctcctg gaccgccgcg gacaccgcgg ctcagatcac 1380
ccagcgcaag ttggaggcgg cccgtgcggc ggagcagctg agagcctacc tggagggcac 1440
gtgcgtggag tggctccgca gatacctgga gaacggggag acgctgcagc gcgcaggtac 1500
caggggcagt ggggagcctt ccccatctcc tatagatctc ccgggatggc ctcccacgag 1560
gaggggagga aaatgggatc agcactggaa tatcgccctc ccttgaatgg agaatggcat 1620
gagttttcct gagtttcctc tgagggcccc ctctgctctc taggacaatt aagggatgaa 1680
gtctctgagg aaatggaggg gaagacagtc cctggaatac tgatcagggg tctcctttga 1740
ccactttgac cactgcagca gctgtggtca ggctgctgac ctttctctca ggccttgttc 1800
tctgcctcac actcaatgtg tctgaaggtt tgattccagc ttttctgagt cctgcagcct 1860
ccactcaggt caggaccaga agtcgctgtt cctccctcag agactagaac tttccaatga 1920
ataggagatt atcccaggtg cctgtgtcca ggctggcgtc tgggttctgt gccgccttcc 1980
ccaccccagg tgtcctgtcc attctcagga tggtcacatg ggcgctgctg gagtgtccca 2040
agagagatgc aaagtgtctg aattttctga ctcttcccgt cagaaccccc aaagacacac 2100
gtgacccacc accccctctc tgaccatgag gccaccctga ggtgctgggc cctgggcttc 2160
taccctgcgg agatcacact gacctggcag cgggatgggg aggaccagac ccaggacacc 2220
gagcttgtgg agaccaggcc agcaggagat ggaaccttcc agaagtgggc agctgtggtg 2280
gtgccttctg gacaagagca gagatacacg tgccatatgc agcacgaggg gctgcaagag 2340
cccctcaccc tgagctgggg taaggagggg aatggggggt cacatctctt atcagagaaa 2400
gcagaagtcc ttctggagcc cttcagccgg gtcagggctg aggcttgggg gtcagggccc 2460
ctcaccttct cctcctttcc cagagccatc ttcccagccc accatcccca tcatgggcat 2520
cgttgctggc ctggctgtcc tggttgtcct agctgtcctt ggagctgtgg tcaccgctat 2580
gatgtgtagg aggaagagct caggtaggga aggggtgaag agcggggtct gggttttctt 2640
gtcccactgg gagtttcaag ccccaggtag aagtgtgccc cgccttgtta ctggaagcac 2700
catccacaca tgggccatcc cagcctggga ccctgtgtgc cagcacttac tcttttgtga 2760
agcacatgtg acaatgaagg acggatgtat caccttgatg attatggtgt tggggtcctg 2820
attccagcat tcatgagtca ggggaaggtc cctgctaagg acagacctta ggagggcagt 2880
tggtccagaa cccacaactg ctttccccat gtttcctgat cctgccctgg gtctgcagtc 2940
gtagttctgg aaacttctct tgggtccaag actaggaggt tcccctaaga tcacatggcc 3000
ctgcctcctc ccagtcccct catagggcat tttcttccca caggtggaaa aggagggagc 3060
tgctctcagg ctgcgtgtaa gtgatggcgg cgggcgtgtg gaggagctca cctactccat 3120
aattcctctt gtcccacatc tcctgcgggc tctgaccagg tctttttttt tgttctaccc 3180
caggcagcaa cagtgcccag ggctctgatg agtctctcat cacttgtaaa ggtgagattc 3240
tggggagctg aagtggtcgg gggtggggca gagggaaaag gcctgggtaa tggggattct 3300
ttgattggga cgtttcgagt gtgtggtggg ccgttcagag tgtcatcgct taccatgact 3360
gacctgaatt tgttcatgac tattgtgttc tgtagcctga gacagctgcc tgtgtgggac 3420
tgagatgcag gatttcttca cacctctcct ttgtgacttc aagagcctct ggcatctctt 3480
tctgcaaagg cacctgaatg tgtctgcgtt cctgttagca taatgtgagg aggtggagag 3540
acagcccacc cccgtgtcca ccgtgacccc tgtccccaca ctgacctgtg ttccctcccc 3600
gatcatcttt cctgttccag agaggtgggg ctggatgtct ccatctctgt ctcaaattca 3660
tggtgcactg agctgcaact tcttacttcc ctaatgaagt taagaacctg aatataaatt 3720
tgtgttctca aatatttgct atgaagcgtt gatggattaa ttaaataagt caattcctag 3780
aagttgagag agcaaataaa gacctgagaa ccttccagaa tttgcatgtt cgctgtgctg 3840
agtctgttgc aggtgggggt ggggaaggct gtgaggagcc gagtgtggac ggggcctgtg 3900
cctagttgct gttcagttct tcatgggctt tatgtggtca gtcctcagct gggtcacctt 3960
cactgctcca ttgtccttgt cccttcagtg gaaacttgtc cagcggaagc tgtgaccaca 4020
gaggctcacc catcgcccag ggcagcccct gcacacggga gtccctgtgc tttctgagac 4080
aaattttcag acccattcag ctcctgccct ccttctaggg ctcc 4124
//
ID LR761883; SV 1; linear; genomic DNA; STD; HUM; 4124 BP.
XX
AC LR761883;
XX
PR Project:PRJEB36711;
XX
DT 24-NOV-2020 (Rel. 144, Created)
DT 24-NOV-2020 (Rel. 144, Last updated, Version 1)
XX
DE Homo sapiens, HLA-C gene for MHC class I antigen, cell line
DE DKMS-LSL_ID17264587_C_1, allele HLA-C*07:new
XX
KW .
XX
OS Homo sapiens (human)
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae;
OC Homo.
XX
RN [1]
RA Albrecht V., Schmidt H. A., Klussmeier A., Lange V., Putke K.;
RT ;
RL Submitted (14-FEB-2020) to the INSDC.
RL DKMS LIFE SCIENCE LAB, Research & Development, St. Petersburger Str. 2,
RL Saxony, 01069 Dresden, Germany
XX
DR MD5; aad1c1a181a0a41f0b8c8cf3190b0564.
XX
FH Key Location/Qualifiers
FH
FT source 1..4124
FT /organism="Homo sapiens"
FT /mol_type="genomic DNA"
FT /cell_line="DKMS-LSL_ID17264587_C_1"
FT /db_xref="taxon:9606"
FT exon 1..573
FT /gene="HLA-C"
FT /allele="HLA-C*07:new"
FT /number=1
FT CDS join(501..573,704..973,1224..1496,2084..2359,2484..2603,
FT 3044..3076,3184..3231,3396..3400)
FT /codon_start=1
FT /transl_table=1
FT /gene="HLA-C"
FT /allele="HLA-C*07:new"
FT /product="MHC class I antigen"
FT /function="antigen presenting molecule"
FT /protein_id="CAA9893277.1"
FT /translation="MRVMAPRALLLLLSGGLALTETWACSHSMRYFDTAVSRPGRGEPR
FT FISVGYVDDTQFVRFDSDAASPRGEPRAPWVEQEGPEYWDRETQKYKRQAQADRVSLRN
FT LRGYYNQSEDGSHTLQRMSGCDLGPDGRLLRGYDQSAYDGKDYIALNEDLRSWTAADTA
FT AQITQRKLEAARAAEQLRAYLEGTCVEWLRRYLENGETLQRAEPPKTHVTHHPLSDHEA
FT TLRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDGTFQKWAAVVVPSGQEQRYT
FT CHMQHEGLQEPLTLSWEPSSQPTIPIMGIVAGLAVLVVLAVLGAVVTAMMCRRKSSGGK
FT GGSCSQAACSNSAQGSDESLITCKA"
FT intron 574..703
FT /gene="HLA-C"
FT /allele="HLA-C*07:new"
FT /number=1
FT exon 704..973
FT /gene="HLA-C"
FT /allele="HLA-C*07:new"
FT /number=2
FT intron 974..1223
FT /gene="HLA-C"
FT /allele="HLA-C*07:new"
FT /number=2
FT exon 1224..1496
FT /gene="HLA-C"
FT /allele="HLA-C*07:new"
FT /number=3
FT intron 1497..2083
FT /gene="HLA-C"
FT /allele="HLA-C*07:new"
FT /number=3
FT exon 2084..2359
FT /gene="HLA-C"
FT /allele="HLA-C*07:new"
FT /number=4
FT intron 2360..2483
FT /gene="HLA-C"
FT /allele="HLA-C*07:new"
FT /number=4
FT exon 2484..2603
FT /gene="HLA-C"
FT /allele="HLA-C*07:new"
FT /number=5
FT intron 2604..3043
FT /gene="HLA-C"
FT /allele="HLA-C*07:new"
FT /number=5
FT exon 3044..3076
FT /gene="HLA-C"
FT /allele="HLA-C*07:new"
FT /number=6
FT intron 3077..3183
FT /gene="HLA-C"
FT /allele="HLA-C*07:new"
FT /number=6
FT exon 3184..3231
FT /gene="HLA-C"
FT /allele="HLA-C*07:new"
FT /number=7
FT intron 3232..3395
FT /gene="HLA-C"
FT /allele="HLA-C*07:new"
FT /number=7
FT exon 3396..4124
FT /gene="HLA-C"
FT /allele="HLA-C*07:new"
FT /number=8
XX
SQ Sequence 4124 BP; 788 A; 1171 C; 1261 G; 904 T; 0 other;
ttattttgct ggatgtagtt taatattacc tgaggtgagg taaggtaagg caaagggtgg 60
gaggcaggga gtccagttca gggacgggga ttccaggagg agaagtgaag gggaaggggc 120
tgggcgcagc cttggggtct ctccctggtt tccacagaca gatccttgtc caggactcag 180
gcacacagtg tgacaaagat gcttggtgta ggagaagagg gatcaggacg aagtcccagg 240
tcccgggcgg ggctctcagg gtctcaggct ccaagggccg tgtctgcatt ggggaggcgc 300
cgcgttgggg attctccact cccctgagtt tcacttctcc caacctgcgt cgggtccttc 360
ttcctgaata ctcatgacgc gtccccaatt cccactccca ttgggtgtcg ggttctagag 420
aagccaatca gcgtctccgc agtcccggtt ctaaagtccc cagtcaccca cccggactca 480
cattctcccc agaggccgag atgcgggtca tggcgccccg agccctcctc ctgctgctct 540
cgggaggcct ggccctgacc gagacctggg cctgtgagtg cggggttggg agggaagcgg 600
cctctgcgga gaggagcgag gggccctccc ggcgagggcg caggacccgg ggagccgcgc 660
agggaggtgg gtcgggcggg tctcagcccc tcctcgcccc caggctccca ctccatgagg 720
tatttcgaca ccgccgtgtc ccggcccggc cgcggagagc cccgcttcat ctcagtgggc 780
tacgtggacg acacgcagtt cgtgcggttc gacagcgacg ccgcgagtcc gagaggggag 840
ccgcgggcgc cgtgggtgga gcaggagggg ccggagtatt gggaccggga gacacagaag 900
tacaagcgcc aggcacaggc tgaccgagtg agcctgcgga acctgcgcgg ctactacaac 960
cagagcgagg acggtgagtg accccggccc ggggcgcagg tcacgacccc tccccatccc 1020
ccacggacgg cccgggtcgc ccagagtctc cccgtctgag atccacccca aggtggatct 1080
gcggaacccg cccagaccct cgaccggaga gagccccagt cgcctttacc cggtttcatt 1140
ttcggtttag gccaaaatcc ccgcgggttg gtcggggcgg ggcggggctc gggggactgg 1200
gctgaccgcg ggggcggggc cagggtctca caccctccag aggatgtctg gctgcgacct 1260
ggggcccgac gggcgcctcc tccgcgggta tgaccagtcc gcctacgacg gcaaggatta 1320
catcgccctg aacgaggacc tgcgctcctg gaccgccgcg gacaccgcgg ctcagatcac 1380
ccagcgcaag ttggaggcgg cccgtgcggc ggagcagctg agagcctacc tggagggcac 1440
gtgcgtggag tggctccgca gatacctgga gaacggggag acgctgcagc gcgcaggtac 1500
caggggcagt ggggagcctt ccccatctcc tatagatctc ccgggatggc ctcccacgag 1560
gaggggagga aaatgggatc agcactggaa tatcgccctc ccttgaatgg agaatggcat 1620
gagttttcct gagtttcctc tgagggcccc ctctgctctc taggacaatt aagggatgaa 1680
gtctctgagg aaatggaggg gaagacagtc cctggaatac tgatcagggg tctcctttga 1740
ccactttgac cactgcagca gctgtggtca ggctgctgac ctttctctca ggccttgttc 1800
tctgcctcac actcaatgtg tctgaaggtt tgattccagc ttttctgagt cctgcagcct 1860
ccactcaggt caggaccaga agtcgctgtt cctccctcag agactagaac tttccaatga 1920
ataggagatt atcccaggtg cctgtgtcca ggctggcgtc tgggttctgt gccgccttcc 1980
ccaccccagg tgtcctgtcc attctcagga tggtcacatg ggcgctgctg gagtgtccca 2040
agagagatgc aaagtgtctg aattttctga ctcttcccgt cagaaccccc aaagacacac 2100
gtgacccacc accccctctc tgaccatgag gccaccctga ggtgctgggc cctgggcttc 2160
taccctgcgg agatcacact gacctggcag cgggatgggg aggaccagac ccaggacacc 2220
gagcttgtgg agaccaggcc agcaggagat ggaaccttcc agaagtgggc agctgtggtg 2280
gtgccttctg gacaagagca gagatacacg tgccatatgc agcacgaggg gctgcaagag 2340
cccctcaccc tgagctgggg taaggagggg aatggggggt cacatctctt atcagagaaa 2400
gcagaagtcc ttctggagcc cttcagccgg gtcagggctg aggcttgggg gtcagggccc 2460
ctcaccttct cctcctttcc cagagccatc ttcccagccc accatcccca tcatgggcat 2520
cgttgctggc ctggctgtcc tggttgtcct agctgtcctt ggagctgtgg tcaccgctat 2580
gatgtgtagg aggaagagct caggtaggga aggggtgaag agcggggtct gggttttctt 2640
gtcccactgg gagtttcaag ccccaggtag aagtgtgccc cgccttgtta ctggaagcac 2700
catccacaca tgggccatcc cagcctggga ccctgtgtgc cagcacttac tcttttgtga 2760
agcacatgtg acaatgaagg acggatgtat caccttgatg attatggtgt tggggtcctg 2820
attccagcat tcatgagtca ggggaaggtc cctgctaagg acagacctta ggagggcagt 2880
tggtccagaa cccacaactg ctttccccat gtttcctgat cctgccctgg gtctgcagtc 2940
gtagttctgg aaacttctct tgggtccaag actaggaggt tcccctaaga tcacatggcc 3000
ctgcctcctc ccagtcccct catagggcat tttcttccca caggtggaaa aggagggagc 3060
tgctctcagg ctgcgtgtaa gtgatggcgg cgggcgtgtg gaggagctca cctactccat 3120
aattcctctt gtcccacatc tcctgcgggc tctgaccagg tctttttttt tgttctaccc 3180
caggcagcaa cagtgcccag ggctctgatg agtctctcat cacttgtaaa ggtgagattc 3240
tggggagctg aagtggtcgg gggtggggca gagggaaaag gcctgggtaa tggggattct 3300
ttgattggga cgtttcgagt gtgtggtggg ccgttcagag tgtcatcgct taccatgact 3360
gacctgaatt tgttcatgac tattgtgttc tgtagcctga gacagctgcc tgtgtgggac 3420
tgagatgcag gatttcttca cacctctcct ttgtgacttc aagagcctct ggcatctctt 3480
tctgcaaagg cacctgaatg tgtctgcgtt cctgttagca taatgtgagg aggtggagag 3540
acagcccacc cccgtgtcca ccgtgacccc tgtccccaca ctgacctgtg ttccctcccc 3600
gatcatcttt cctgttccag agaggtgggg ctggatgtct ccatctctgt ctcaaattca 3660
tggtgcactg agctgcaact tcttacttcc ctaatgaagt taagaacctg aatataaatt 3720
tgtgttctca aatatttgct atgaagcgtt gatggattaa ttaaataagt caattcctag 3780
aagttgagag agcaaataaa gacctgagaa ccttccagaa tttgcatgtt cgctgtgctg 3840
agtctgttgc aggtgggggt ggggaaggct gtgaggagcc gagtgtggac ggggcctgtg 3900
cctagttgct gttcagttct tcatgggctt tatgtggtca gtcctcagct gggtcacctt 3960
cactgctcca ttgtccttgt cccttcagtg gaaacttgtc cagcggaagc tgtgaccaca 4020
gaggctcacc catcgcccag ggcagcccct gcacacggga gtccctgtgc tttctgagac 4080
aaattttcag acccattcag ctcctgccct ccttctaggg ctcc 4124
//