Dbfetch
ID LR761322; SV 1; linear; genomic DNA; STD; HUM; 4253 BP. XX AC LR761322; XX PR Project:PRJEB36669; XX DT 09-FEB-2022 (Rel. 144, Created) DT 09-FEB-2022 (Rel. 144, Last updated, Version 1) XX DE Homo sapiens, HLA-C gene for MHC class I antigen, cell line DE Barretos_BAR374590_C_1, allele HLA-C*05:new XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RA Cita F R., Stelet N V.; RT ; RL Submitted (11-FEB-2020) to the INSDC. RL INSTITUTO NACIONAL DE CANCER JOSE ALENCAR GOMES DA SILVA, LABORATORIO DE RL IMUNOGENETICA, 831 EQUADOR ST. SANTO CRISTO, RIO DE JANEIRO/RJ, Brazil XX DR MD5; a716101dec4b0976dfd13bcaba004bbd. XX FH Key Location/Qualifiers FH FT source 1..4253 FT /organism="Homo sapiens" FT /mol_type="genomic DNA" FT /cell_line="Barretos_BAR374590_C_1" FT /db_xref="taxon:9606" FT exon 1..565 FT /gene="HLA-C" FT /allele="HLA-C*05:new" FT /number=1 FT CDS join(493..565,696..965,1212..1487,2075..2350,2472..2591, FT 3031..3063,3171..3218,3383..3387) FT /codon_start=1 FT /transl_table=1 FT /gene="HLA-C" FT /allele="HLA-C*05:new" FT /product="MHC class I antigen" FT /function="antigen presenting molecule" FT /protein_id="CAA9728165.1" FT /translation="MRVMAPRTLILLLSGALALTETWACSHSMRYFYTAVSRPGRGEPR FT FIAVGYVDDTQFVQFDSDAASPRGEPRAPWVEQEGPEYWDRETQKYKRQAQTDRVNLRK FT LRGYYNQSEAGSHTLQRMYGCDLGPDGRLLRGYNQFAYDGKDYIALNEDLRSWTAADKA FT AQITQRKWEAAREAEQRRAYLEGTCVEWLRRYLENGKKTLQRAEHPKTHVTHHPVSDHE FT ATLRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRY FT TCHVQHEGLPEPLTLRWGPSSQPTIPIVGIVAGLAVLAVLAVLGAVMAVVMCRRKSSGG FT KGGSCSQAASSNSAQGSDESLIACKA" FT intron 566..695 FT /gene="HLA-C" FT /allele="HLA-C*05:new" FT /number=1 FT exon 696..965 FT /gene="HLA-C" FT /allele="HLA-C*05:new" FT /number=2 FT intron 966..1211 FT /gene="HLA-C" FT /allele="HLA-C*05:new" FT /number=2 FT exon 1212..1487 FT /gene="HLA-C" FT /allele="HLA-C*05:new" FT /number=3 FT intron 1488..2074 FT /gene="HLA-C" FT /allele="HLA-C*05:new" FT /number=3 FT exon 2075..2350 FT /gene="HLA-C" FT /allele="HLA-C*05:new" FT /number=4 FT intron 2351..2471 FT /gene="HLA-C" FT /allele="HLA-C*05:new" FT /number=4 FT exon 2472..2591 FT /gene="HLA-C" FT /allele="HLA-C*05:new" FT /number=5 FT intron 2592..3030 FT /gene="HLA-C" FT /allele="HLA-C*05:new" FT /number=5 FT exon 3031..3063 FT /gene="HLA-C" FT /allele="HLA-C*05:new" FT /number=6 FT intron 3064..3170 FT /gene="HLA-C" FT /allele="HLA-C*05:new" FT /number=6 FT exon 3171..3218 FT /gene="HLA-C" FT /allele="HLA-C*05:new" FT /number=7 FT intron 3219..3382 FT /gene="HLA-C" FT /allele="HLA-C*05:new" FT /number=7 FT exon 3383..4253 FT /gene="HLA-C" FT /allele="HLA-C*05:new" FT /number=8 XX SQ Sequence 4253 BP; 831 A; 1192 C; 1276 G; 954 T; 0 other; ttattttgct ggatgtagtt taatattacc tgaggtaagg taaggcaaag agtgggaggc 60 agggagtcca gttcagggac ggggattcca ggagaagtga aggggaaggg gctgggcgca 120 gcctgggggt ctctccctgg tttccacaga cagatccttg gccaggactc aggcacacag 180 tgtgacaaag atgcttggtg taggagaaga gggatcagga cgaagtccca ggtcccgggc 240 ggggctctca gggtctcagg ctccaagggc cgtgtctgca ctggggaggc gccgcgttga 300 ggattctcca ctcccctgag tttcacttct tccaacctgc gtcgggtcct tcttcctgaa 360 tactcatgac gcgtccccaa ttcccactcc cattgggtgt cgggttctag agaagccaat 420 cagcgtctcc gcagtcccgg ttctaaagtc cccagtcacc cacccggact cggattctcc 480 ccagacgccg agatgcgggt catggcgccc cgaaccctca tcctgctgct ctcgggagcc 540 ctggccctga ccgagacctg ggcctgtgag tgcgaggttg ggagggaaac ggcctctgcg 600 gagaggagcg aggggcccgc ccggcgaggg cgcaggaccc ggggagccgc gcagggagga 660 gggtcgggcg ggtctcagcc cctcctcgcc cccaggctcc cactccatga ggtatttcta 720 caccgccgtg tcccggcccg gccgcggaga gccccgcttc atcgcagtgg gctacgtgga 780 cgacacgcag ttcgtgcagt tcgacagcga cgccgcgagt ccaagagggg agccgcgggc 840 gccgtgggtg gagcaggagg ggccggagta ttgggaccgg gagacacaga agtacaagcg 900 ccaggcacag actgaccgag tgaacctgcg gaaactgcgc ggctactaca accagagcga 960 ggccggtgag tgaccccggc ccggggcgca ggtcacgacc cctccccatc ccccacggac 1020 ggcccgggtc gccccgagtc tcccggtctg agatccaccc cgaggctgcg gaacccgccc 1080 agaccctcga ccggagagag ccccagtcac ctttacccgg tttcattttc agtttaggcc 1140 aaaatccccg cgggttggtc ggggctgggg cggggctcgg gggacggggc tgaccacggg 1200 ggcggggcca gggtctcaca ccctccagag gatgtatggc tgcgacctgg ggcccgacgg 1260 gcgcctcctc cgcgggtata accagttcgc ctacgacggc aaggattaca tcgccctgaa 1320 tgaggacctg cgctcctgga ccgccgcgga caaggcggct cagatcaccc agcgcaagtg 1380 ggaggcggcc cgtgaggcgg agcagcggag agcctacctg gagggcacgt gcgtggagtg 1440 gctccgcaga tacctggaga acgggaagaa gacgctgcag cgcgcgggta ccaggggcag 1500 tggggagcct tccccatctc ctgtagatct cccgggatgg cctcccacga ggaggggagg 1560 aaaatgggat cagcgctgga atatcgccct cccttgaatg gagaatggga tgagttttcc 1620 tgagtttctt ctgagggccc cctctgctct ctaggacaat taagggatga agtccttgag 1680 gaaatggagg ggaagacagt ccctggaata ctgatcaggg gtcccctttg accactttga 1740 ccactgcagc agctgtggtc aggctgctga cctttctctc aggccttgtt ctctgcctca 1800 cgctcaatgt gtttaaaggt ttgattccag cttttctgag tccttcggcc tccactcagg 1860 tcaggaccag aagtcgctgt tcctccctca gagactagaa ctttccaatg aataggagat 1920 tatcccaggt gcctgtgtcc aggctggcgt ctgggttctg tgcccccttc cccaccccag 1980 gtgtcctgtc cattctcagg atggtcacat gggcactgtt ggagtgtcgc aagagagata 2040 caaagtgtct gaattttctg actcttcccg tcagaacacc caaagacaca cgtgacccac 2100 catcccgtct ctgaccatga ggccaccctg aggtgctggg ccctgggctt ctaccctgcg 2160 gagatcacac tgacctggca gcgggatggc gaggaccaaa ctcaggacac cgagcttgtg 2220 gagaccaggc cagcaggaga tggaaccttc cagaagtggg cagctgtggt ggtgccttct 2280 ggagaagagc agagatacac gtgccatgtg cagcacgagg ggctgccaga gcccctcacc 2340 ctgagatggg gtaaggaggg ggatgagggg tcatgtgtct tctcagggaa agcagaagtc 2400 ctggagccct tcagccgggt cagggctgag gcttgggggt cagggcccct caccttcccc 2460 tcctttccca gggccatctt cccagcccac catccccatc gtgggcatcg ttgctggcct 2520 ggctgtcctg gctgtcctag ctgtcctagg agctgtgatg gctgttgtga tgtgtaggag 2580 gaagagctca ggtagggaag gggtgaggag tggggtctgg gttttcttgt cccactggga 2640 gtttcaagcc ccaggtagaa gtgtgcccca cctcgttact ggaagcacca tccacacatg 2700 ggccatccca gcctgggacc ctgtgtgcta gcacttactc tgttgtgaag cacatgacaa 2760 tgaaggacag atgtatcacc ttgatgatta tggtgttggg gtccttgatt ccagcattca 2820 tgagtcaggg gaaggtccct gctaaggaca gaccttagga gggcagttgc tccagaaccc 2880 acagctgctt tccccgtgtt tcctgatcct gccctgggtc tgcagtcata gttctggaaa 2940 cttctcttgg gtccaagact aggaggttcc cctaagatcg catggccctg cctcctccct 3000 gtcccctcac agggcatttt cttcccacag gtggaaaagg agggagctgc tctcaggctg 3060 cgtgtaagtg atggcggtgg gcgtgtggag gagctcaccc accccataat tcctcttgtc 3120 ccacatctcc tgcgggctct gaccaggtct ttttttttgt tctaccccag ccagcaacag 3180 tgcccagggc tctgatgagt ctctcatcgc ttgtaaaggt gagattctgg ggagctgaag 3240 tggtcggggg tggggcagag ggaaaaggcc taggtaatgg ggatcctttg attgggacgt 3300 ttcgaatgtg tggtgagctg ttcagagtgt catcacttac catgactgac ctgaatttgt 3360 tcatgactat tgtgttctgt agcctgagac agctgcctgt gtgggactga gatgcaggat 3420 ttcttcacac ctttcctttg tgacttcaag agcctctggc atctctttct gcaaaggcat 3480 ctgaatgtgt ctgcgttcct gttagcataa tgtgaggagg tggagagaca gcccaccccc 3540 gtgtccaccg tgacccctgt ccccacactg acctgtgttc cctccccgat catctttcct 3600 gttccagaga agtgggctgg atgtctccat ctctgtctca actttacgtg tactgagctg 3660 caacttctta cttccctact gaaaataaga atctgaatat aaatttgttt tctcaaatat 3720 ttgctatgag aggttgatgg attaattaaa taagtcaatt cctggaagtt gagagagcaa 3780 ataaagacct gagaaccttc cagaatccgc atgttcgctg tgctgagtct gttgcaggtg 3840 ggggtgggga aggctgtgag gagacgagtg tggacggggc ctgtgcctag ttgctgttca 3900 gttcttcatg ggctttatgt ggtcagtcct cagctgggtc accttcactg ctccattgtc 3960 cttgtccctt cagtggaaac ttgtccagcg ggagctgtga ccacagaggc tcacacatcg 4020 cccagggcag cccctgcaca cgggagtccc tgtgctttct gagacaaatt ttcagaccca 4080 ttcagctcct gccctccttc tagggctcct cttctgcttt ggtctcctgc cctctctccc 4140 ttccctgatt ccagtaatct tcgtgctgac tccaatccca actcatgaat ctaaagcaga 4200 gcctaattta gatttatatt tgtttgtaaa attgggtcca tagtctagaa ttg 4253 //