Dbfetch
ID LR757749; SV 1; linear; genomic DNA; STD; HUM; 4108 BP. XX AC LR757749; XX PR Project:PRJEB36068; XX DT 09-JAN-2022 (Rel. 144, Created) DT 09-JAN-2022 (Rel. 144, Last updated, Version 1) XX DE Homo sapiens, HLA-C gene for MHC class I antigen, cell line DE Barretos_BAR202382_C_1, allele HLA-C*04:new XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RA Cita F R., Stelet N V.; RT ; RL Submitted (27-JAN-2020) to the INSDC. RL INSTITUTO NACIONAL DE CANCER JOSE ALENCAR GOMES DA SILVA, LABORATORIO DE RL IMUNOGENETICA, 831 EQUADOR ST. SANTO CRISTO, RIO DE JANEIRO/RJ, Brazil XX DR MD5; b713f6cc0723f1fc73803a744c2a6368. XX FH Key Location/Qualifiers FH FT source 1..4108 FT /organism="Homo sapiens" FT /mol_type="genomic DNA" FT /cell_line="Barretos_BAR202382_C_1" FT /db_xref="taxon:9606" FT exon 1..412 FT /gene="HLA-C" FT /allele="HLA-C*04:new" FT /number=1 FT CDS join(340..412,543..812,1059..1334,1922..2197,2319..2438, FT 2878..2910,3018..3065,3230..3234) FT /codon_start=1 FT /transl_table=1 FT /gene="HLA-C" FT /allele="HLA-C*04:new" FT /product="MHC class I antigen" FT /function="antigen presenting molecule" FT /protein_id="CAA8001934.1" FT /translation="MRVMAPRTLILLLSGALALTETWAGSHSMRYFSTSVSWPGRGEPR FT FIAVGYVDDTQFVRFDSDAASPRGEPREPWVEQEGPEYWDRETQKYKRQAQADRVNLRK FT LRGYYNQSEDGSHTLQRMFGCDLGPDGRLLRGYNQFAYDGKDYIALNEDLRSWTAADTA FT AQITQRKWEAAREAEQRRAYLEGTCVEWLRRYLENGKETLQRAEHPKTHVTHHPVSDHE FT ATLRCWALGFYPAEITLTWQWDGEDQTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRY FT TCHVQHEGLPEPLTLRWKPSSQPTIPIVGIVAGLAVLAVLAVLGAMVAVVMCRRKSSGG FT KGGSCSQAASSNSAQGSDESLIACKA" FT intron 413..542 FT /gene="HLA-C" FT /allele="HLA-C*04:new" FT /number=1 FT exon 543..812 FT /gene="HLA-C" FT /allele="HLA-C*04:new" FT /number=2 FT intron 813..1058 FT /gene="HLA-C" FT /allele="HLA-C*04:new" FT /number=2 FT exon 1059..1334 FT /gene="HLA-C" FT /allele="HLA-C*04:new" FT /number=3 FT intron 1335..1921 FT /gene="HLA-C" FT /allele="HLA-C*04:new" FT /number=3 FT exon 1922..2197 FT /gene="HLA-C" FT /allele="HLA-C*04:new" FT /number=4 FT intron 2198..2318 FT /gene="HLA-C" FT /allele="HLA-C*04:new" FT /number=4 FT exon 2319..2438 FT /gene="HLA-C" FT /allele="HLA-C*04:new" FT /number=5 FT intron 2439..2877 FT /gene="HLA-C" FT /allele="HLA-C*04:new" FT /number=5 FT exon 2878..2910 FT /gene="HLA-C" FT /allele="HLA-C*04:new" FT /number=6 FT intron 2911..3017 FT /gene="HLA-C" FT /allele="HLA-C*04:new" FT /number=6 FT exon 3018..3065 FT /gene="HLA-C" FT /allele="HLA-C*04:new" FT /number=7 FT intron 3066..3229 FT /gene="HLA-C" FT /allele="HLA-C*04:new" FT /number=7 FT exon 3230..4108 FT /gene="HLA-C" FT /allele="HLA-C*04:new" FT /number=8 XX SQ Sequence 4108 BP; 788 A; 1167 C; 1227 G; 926 T; 0 other; cttggccagg actcaggcac acagtgtgac aaagatgctt ggtgtaggag aagaggaatc 60 aggacgaagt cccaggtccc gggcggggct ctcagggtct caggctccaa gggccgtgtc 120 tgcactgggg aggcgccgcg ttggggattc tccactcccc tgagtttcac ttcttctccc 180 aacctgcgtc gggtccttct tcctgaatac tcatgacgcg tccccaattc ccactcccat 240 tgggtgtcgg gttctagaga agccaatcag cgtctccgca gtcccggttc taaagtcccc 300 agtcacccac ccggactcag attctcccca gacgccgaga tgcgggtcat ggcgccccga 360 accctcatcc tgctgctctc gggagccctg gccctgaccg agacctgggc cggtgagtgc 420 ggggttggga gggaaacggc ctctggggag aggagcgagg ggcccgcccg gcgagggcgc 480 aggacccggg gagccgcgca gggaggaggg tcgggcgggt ctcagccact cctcgtcccc 540 aggctcccac tccatgaggt atttctccac atccgtgtcc tggcccggcc gcggggagcc 600 ccgcttcatc gcagtgggct acgtggacga cacgcagttc gtgcggttcg acagcgacgc 660 cgcgagtcca agaggggagc cgcgggagcc gtgggtggag caggaggggc cggagtattg 720 ggaccgggag acacagaagt acaagcgcca ggcacaggct gaccgagtga acctgcggaa 780 actgcgcggc tactacaacc agagcgagga cggtgagtga ccccggcccg gggcgcaggt 840 cacgacccct ccccatcccc cacggacggc ccgggtcgcc ccgagtctcc ccgtctgaga 900 tccaccccga ggctgcggaa cccgcccaga ccctcgaccg gagagagccc cagtcacctt 960 tacccggttt cattttcagt ttaggccaaa atccccgcgg gttggtcggg actggggcgg 1020 ggctcggggg accgggctga ccacgggggc ggggccaggg tctcacaccc tccagaggat 1080 gtttggctgc gacctggggc cggacgggcg cctcctccgc gggtataacc agttcgccta 1140 cgacggcaag gattacatcg ccctgaacga ggatctgcgc tcctggaccg ccgcggacac 1200 ggcggctcag atcacccagc gcaagtggga ggcggcccgt gaggcggagc agcggagagc 1260 ctacctggag ggcacgtgcg tggagtggct ccgcagatac ctggagaacg ggaaggagac 1320 gctgcagcgc gcgggtacca ggggcagtgg ggagccttcc ccatctcccg tagatctccc 1380 gggatggcct cccacgagga ggggaggaaa atgggatcag cgctagaata tcgccctccc 1440 ttgaatggag aatgggatga gttttcctga gtttcctctg agggccccct ctgctctcta 1500 ggacaattaa gggatgaagt ccttgaggaa atggagggga agacagtccc tggaatactg 1560 atcaggggtc ccctttgacc actttgacca ctgcagcagc tgtggtcagg ctgctgacct 1620 ttctctcagg ccttgttctc tgcctgacgc tcaatgtgtt tgaaggtttg attccagctt 1680 ttctgagtcc ttcggcctcc actcaggtca ggaccagaag tcgctgttcc tccctcagag 1740 actagaactt tccaatgaat aggagattat cccaggtgcc tgtgtccagg ctggcgtctg 1800 ggttctgtgc ccccttcccc accccaggtg tcctgtccat tctcaggatg gtcacatggg 1860 cgctgttgga gtgtcgcaag agagatacaa agtgtctgaa ttttctgact cttcccatca 1920 gaacacccaa agacacacgt gacccaccat cccgtctctg accatgaggc caccctgagg 1980 tgctgggccc tgggcttcta ccctgcggag atcacactga cctggcagtg ggatggggag 2040 gaccaaactc aggacaccga gcttgtggag accaggccag caggagatgg aaccttccag 2100 aagtgggcag ctgtggtggt gccttctgga gaagagcaga gatacacgtg ccatgttcag 2160 cacgaggggc tgccggagcc cctcaccctg agatggagta aggaggggga tgaggggtga 2220 tgtgtcttct cagggaaagc agaagtcctg gagcccttca gccgggtcag ggctgaggct 2280 tggaggtcag ggcccctcac cttcccctcc tttcccagag ccgtcttccc agcccaccat 2340 ccccatcgtg ggcatcgttg ctggcctggc tgtcctggct gtcctagctg tcctaggagc 2400 tatggtggct gttgtgatgt gtaggaggaa gagctcaggt agggaagggg tgaggagtgg 2460 ggtctgggtt ttcttgttcc actgggagtt tcaagcccca ggtagaagtg tgccccacct 2520 cgttactgga agcaccatcc acacgtgggc catcccagcc tgggaccctg tgtgccagca 2580 cttactctgt tgtgaagcac atgacaatga aggacagatg tatcaccttg atgattatgg 2640 tgttggggtc cttgattcca gcattcatga gtcaggggaa ggtccctgct aaggacagac 2700 cttaggaggg cagttgcttc agaacccaca gctgctttcc ccgtgtttcc tgatcctgcc 2760 ctgggtctgc agtcatagtt ctggaaactt ctcttgggtc caagactagg aggttcccct 2820 aagatcgcat ggccctgcct cctccctgtc ccctcacagg gcattttctt cccacaggtg 2880 gaaaaggagg gagctgctct caggctgcgt gtaagtgatg gcggtgggcg tgtggaggag 2940 ctcacccacc ccataattcc tcttgtccca catctcctgc gggctctgac caggtctttt 3000 tttttgttct accccagcca gcaacagtgc ccagggctct gatgagtctc tcatcgcttg 3060 taaaggtgag attctgggga gctgaagtgg tcgggggtgg ggcagaggga aaaggcctag 3120 gtaatgggga tcctttgatt gggacgtttc gaatgtgtgg tgagctgttc agagtgtcat 3180 cacttaccat gactgacctg aatttgttca tgactattgt gttctgtagc ctgagacagc 3240 tgcctgtgtg ggactgagat gcaggatttc ttcacacctc tcctttgtga cttcaagagc 3300 ctctggcatc tctttctgca aaggcatctg aatgtgtctg cgttcctgtt agcataatgt 3360 gaggaggtgg agagacagcc cacccccgtg tccaccgtga cccctgtccc cacactgacc 3420 tgtgttccct ccccgatcat ctttcctgtt ccagagaagt gggctggatg tctccatctc 3480 tgtctcaact tcatggtgcg ctgagctgca acttcttact tccctaatga agttaagaac 3540 ctgaatataa atttgttttc tcaaatattt gctatgaagg gttgatggat taattaaata 3600 agtcaattcc tggaagttga gagagcaaat aaagacctga gaaccttcca gaatccgcat 3660 gttcgctgtg ctgagtctgt tgcaggtggg ggtggggaag gctgtgagga gccgagtgtg 3720 gacggggcct gtgcctagtt gctgttcagt tcttcatggg ctttatgtgg tcagtcctca 3780 gctgggtcac cttcactgct ccattgtcct tgtcccttca gtggaaactt gtccagcggg 3840 agctgtgacc acagaggctc acacatcgcc cagggcagcc cctgcacacg ggagtccctg 3900 tgctttctga gacaaatttt cagacccatt cagctcctgc cctccttcta gggctcctct 3960 tctgctttgg tctcctgccc tctctccctt ccctgattcc agtgatcttc gtgctgactc 4020 caatcccaac tcatgaatct aaagcagagc ctaatttaga tttatatttg tttgtaaaat 4080 tgggtccata gtctagaatt gttccttc 4108 //