Dbfetch
ID LR745772; SV 1; linear; genomic DNA; STD; HUM; 11528 BP.
XX
AC LR745772;
XX
PR Project:PRJEB36217;
XX
DT 23-JUL-2020 (Rel. 144, Created)
DT 23-JUL-2020 (Rel. 144, Last updated, Version 1)
XX
DE Homo sapiens, HLA-DPB1 gene for MHC class II antigen, cell line
DE DKMS-LSL_ID14279618_DPB1_2, allele HLA-DPB1*02:new
XX
KW .
XX
OS Homo sapiens (human)
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae;
OC Homo.
XX
RN [1]
RA Albrecht V., Schmidt H. A., Klussmeier A., Lange V., Putke K.;
RT ;
RL Submitted (15-JAN-2020) to the INSDC.
RL DKMS LIFE SCIENCE LAB, Research & Development, St. Petersburger Str. 2,
RL Saxony, 01069 Dresden, Germany
XX
DR MD5; beb04a1e7705523e8bd71e58eea7d5f5.
XX
FH Key Location/Qualifiers
FH
FT source 1..11528
FT /organism="Homo sapiens"
FT /mol_type="genomic DNA"
FT /cell_line="DKMS-LSL_ID14279618_DPB1_2"
FT /db_xref="taxon:9606"
FT exon 1..466
FT /gene="HLA-DPB1"
FT /allele="HLA-DPB1*02:new"
FT /number=1
FT CDS join(367..466,5003..5266,9277..9558,10106..10216,
FT 10546..10565)
FT /codon_start=1
FT /transl_table=1
FT /gene="HLA-DPB1"
FT /allele="HLA-DPB1*02:new"
FT /product="MHC class II antigen"
FT /function="antigen presenting molecule"
FT /protein_id="CAA7154599.1"
FT /translation="MMVLQVSAAPRTVALTALLMVLLTSVVQGRATPENYLFQGRQECY
FT AFNGTQRFLERYIYNREEFVRFDSDVGEFRAVTELGRPDEEYWNSQKDILEEERAVPDR
FT MCRHNYELGGPMTLQRRVQPRVNVSPSKKGPLQHHNLLVCHVTDFYPGSIQVRWFLNGQ
FT EETAGVVSTNLIRNGDWTFQILVMLEMTPQQGDVYTCQVEHTSLDSPVTVEWKAQSDSA
FT RSKTLTGAGGFVLGLIICGVGIFMHRRSKKVQRGSA"
FT intron 467..5002
FT /gene="HLA-DPB1"
FT /allele="HLA-DPB1*02:new"
FT /number=1
FT exon 5003..5266
FT /gene="HLA-DPB1"
FT /allele="HLA-DPB1*02:new"
FT /number=2
FT intron 5267..9276
FT /gene="HLA-DPB1"
FT /allele="HLA-DPB1*02:new"
FT /number=2
FT exon 9277..9558
FT /gene="HLA-DPB1"
FT /allele="HLA-DPB1*02:new"
FT /number=3
FT intron 9559..10105
FT /gene="HLA-DPB1"
FT /allele="HLA-DPB1*02:new"
FT /number=3
FT exon 10106..10216
FT /gene="HLA-DPB1"
FT /allele="HLA-DPB1*02:new"
FT /number=4
FT intron 10217..10545
FT /gene="HLA-DPB1"
FT /allele="HLA-DPB1*02:new"
FT /number=4
FT exon 10546..11528
FT /gene="HLA-DPB1"
FT /allele="HLA-DPB1*02:new"
FT /number=5
XX
SQ Sequence 11528 BP; 3140 A; 2535 C; 2987 G; 2866 T; 0 other;
taatccctgt agatgggcca gcagaatatt tgagatcacc ttcagagcaa agaaaacgca 60
taatctcgcc aaacatcatg acttatctga ctggttaaaa tgagtatcac tgtctttcct 120
ccgtcatctt aagtgcatca caggctttat attttcagac ctttcatact aactttctgc 180
ctagtgagca atgactcata caaagctcag tgtccattgg ttcttttctc agactctgtc 240
caatcccagg gtcacagaag actacttggg ttcatggtct ctaatatttc aaacaggagc 300
tccctttagc gagtccttct tttcctgact gcagctcttt tcattttgcc atccttttcc 360
agctccatga tggttctgca ggtttctgcg gccccccgga cagtggctct gacggcgtta 420
ctgatggtgc tgctcacatc tgtggtccag ggcagggcca ctccaggtaa gagccgaact 480
gccattcttg gagggtctgg ctcagggaac aattcctagg ggacgttatc tttaagggat 540
caaattctga gacaggctgc gggggctcct gccctaaggc agtgtcctct cttcccagct 600
agagaaagag gttcatcccc tataggatag cttgctaccc tactggccta ttctctctcc 660
aaggacatgg gtacagtaaa cagagagagg tgcccagtgg tcagtatgct tgtctttggg 720
gaaaatggga ccaagaggtc ctggataacc ttggacagac aaggtttgca gagagagaag 780
ttggcaagtg caggctcctg ggcgtgttca tgtctgcatc cagcctggag gggactcagg 840
cagagagccc taagctggag tgtccaggct ctgaggatca ctgaggattc agtgctcacg 900
aagaatgcct cttattcccc agggtggagc aggagcccac atcccttgga caattaagga 960
gagaagggag ggagggggat aggttttagc ccctgaaggc attctcatta aaggtacttc 1020
tcccagcctc cccagaactt ggttagggta ctagagtggg ttgcgacttg taggaagaat 1080
gagatgaggt tgtgtgggtg catgacaggg attgagtgta ggttatcaga cagccaagga 1140
agcagtaacc aagtgaaaaa tctcttcttc ctgctgcctc cctgtggctg gtgtaatatt 1200
atggcatcta tgatccattg tttttctctc aggatactct caggatattt ctttttatat 1260
atatatatac tttaagttct agggtacatg tgcacaacgt gcaggtttgt tacatatgta 1320
tacatgtgcc atgttggtgt gctgcaccca ttaactcgtc atttacatta ggtatatttc 1380
ctaatgctat ccctcccccc tccccccacc ccacaacagg ccccggtgta tgatgttccc 1440
cttcctgtgt ccatgtgttc tcattgttca gttcccacct atgagtgaga acatgtggtc 1500
tttggttttt tgtccttgca atagtttgct gtgaatgatg gtttccagct tcctccatgt 1560
ccctacaaag gacatgaact catccttttt tatggctgca cagtattcca tggtgtatat 1620
gtgtgcattt tcttaatcca gtctatcact gatggacagt tgggttggtt ccaagtcttt 1680
gctattgtga atagtgccgc tataaacata tgtgtgcatg tgtctttata gcagcatgat 1740
ttataatcct ttgggtatat acccagtaat gggatggctg ggtcaaatgg tatttctagt 1800
tctagatcct tgaggaattg ccacactgtc ttgagatacc atctcacacc agttaaaatg 1860
gcgatcatta aaaagtcagg aaacaacagg tgctggagag gatgtggaga aataggaaca 1920
cttttactct gttggtggga ctgtaaacta gttcaaccat tgtactctca ggacatttct 1980
agtccaaatt tacaccaaca ctctgagagg aaggactgca aagtaggtac cttagttttc 2040
cactgacttc cacttttcct gcttacaccc ttcctcctag acctctccac acccctccta 2100
ggacacacct aaaaggtact gacatcatgt cacctcctca tctttcaggg tagcaaggtt 2160
ggaatctcct gaatacagcc cctcaagccc taaaacctct tatctattac cttgggttca 2220
ttgtccagga aggggaggag aacttgaact tgtagtcaca gaagggtgct gagaactaac 2280
cagcaggacg gctcagccct gggaactgca gaggggtgag gctggggaga gaggaggctg 2340
gagcagcact ggtgacactg aacagtgtca ggaggaagtg acggatgcag cgcccccatc 2400
ccataggcag agctgtcatg tgggatgagg gacagtgttg ggagccacca aggaaaccca 2460
gaggtggggg agcagagagc agaagggagc atgtgatgct ggacagtgaa agggaggaca 2520
ggcaaaggct gggttgaggt ttgtaggggg aatgagatga ggcagtggag ccatgtgaca 2580
gggactgagg gtagattact ggagctccct gcgtagaatg aatgttcaat caaaatttgc 2640
tggagggaga gctggagcca taggggagtg ggtaaagtgg gcagggctga ttccacaatt 2700
ccctgcatgc tcccccaact ccacacacat ccccaacctc aaacagggca caagaccaaa 2760
gggctgagga gccaggctat agcttaaaga ggctggggga gaaaagcttg gctgagacaa 2820
cccataggga gctagaggtt tttaatatat cctattctga ataagagacg aattcattca 2880
gatcagtggt ttcaaaccgt gctctgggca actcaattgc taagggttcc acaaacagga 2940
taaagtttct tatatacaaa aaaaaatgaa ggtttcaaat tacaccataa aacccctcat 3000
tgcttatgtc tacttggcag gtaaaattcc atttcaaaag ttaaatgtac ttaaaaaatt 3060
acctaagact gggtaaatta aaaaaattaa atgttgcaaa gaaaaaattc aaaattctta 3120
ttcttgaatg aaaaacgttc tcttactggt gattgaggag gagaaacaaa gactaacaaa 3180
tgaaaatggg agaatccaca ctcagagtgg ggcaactgaa caggcagggg cggatggatg 3240
gcagaggagg aggaatctgg actcaaggag ctggggggct ctgggcctgg aattttaggg 3300
tctggggccc aaggcaccag gagaagaggc aggtcaggat atctgagtca agacctggga 3360
tcttgcctta gcaatgacac tggagactaa aggtggactc catggtgccc ttgagcccag 3420
ccctacccca tctccactat cctctgccac cagctgtgca acttctgcta ggggtgaggt 3480
taataaactg gagaagttaa tttgtggagc atgaaacaga tgagcagaac aatcacagca 3540
ccttaatttc cccagtgtgc ccaagaacag agcaggcctg aagatactca aacagaaaca 3600
aacatgtgcc gtgtcactga taattctgtg tagacacaca cctgccagac actgctcatg 3660
gcactcccta ggaagaacag catgtgggaa aggctgccaa aattgttcat gtaaaaatta 3720
catcaatgct gtcttcctcg gtgctgccta tgcagctggc agccatctct tcctccacat 3780
catggcctcc ctcagactcc tcatgaagga taagatcctc aaaaagagga ccaacaagtt 3840
catgaggcac caatcagact gaaatgtcaa aattaagcat aactggcgga aacccagagg 3900
tcttaacagt agggttcgta gaaggtccaa gggccagatc ttgatgccca acattgctta 3960
tgggagcaac aacaacaaca aaaaaaacat gctgcccagt ggcttccaga agtttctggt 4020
ccacagcctc aaggagctga aagtgctgct gatgtgcaac aaatcttact gtgctgagat 4080
cgctcacaaa atttcctcca gaactgcaaa gtcatcatgg aaagagtcac ccagccggcc 4140
atcagagtca ccaaccccag taccagggtg cacagctaag aaaatgagta gaaagttcat 4200
gtccacgttt tgtgtgtaaa taaaaccata aaaactgcca aaaaaaatta catcaatgcc 4260
tctaaaccca aaggactcta cccccacagg tccctggttg ttgtggtgat tttcattgtg 4320
taaaatactt tccacatctt ttgacaccaa gtctttctgc agccatgttt gaaaattaac 4380
tttcaggcta cagagtcttt cttataccaa agttgaagaa agttttaaga aatatatttc 4440
tacatctcct acatgcaaaa caacaggagc aagttgagga attctcaaga aactggtcga 4500
gaagagagag cgcttagcta tggaaaagag aaagaaggaa gggagggctt cctggaggag 4560
gtggcatttg aaccaggact gacatcagga tggaaatgtc agtcagggag ttaagtaggg 4620
ggagcagctc cgccctccac gtccccagct cctcccgccc ctgttttttc tcccagtgac 4680
cccacgtgaa acgtctccgc ctcctccagc caccagcaga agggactgcc ttcccctcag 4740
tgctcgcccc tccctagtga tcactcagtg cccctgagct cattcttttc agtaaattct 4800
ctctctgcgt ggtgagaaaa caggcctgga gaggctctgc gacccgctta ggaccacaga 4860
actcggtact aggaaaactc ctattttaaa atccagccct gggtgggaag atttgggaag 4920
aatcgttaat attgagagag agagggagaa agaggattag atgagagtgg cgcctccgct 4980
catgtccgcc ccctccccgc agagaattac cttttccagg gacggcagga atgctacgcg 5040
tttaatggga cacagcgctt cctggagaga tacatctaca accgggagga gttcgtgcgc 5100
ttcgacagcg acgtggggga gttccgggcg gtgacggagc tggggcggcc tgatgaggag 5160
tactggaaca gccagaagga catcctggag gaggagcggg cagtgccgga caggatgtgc 5220
agacacaact acgagctggg cgggcccatg accctgcagc gccgaggtga gtgagggctt 5280
tgggccggcg gtcccagggc agccccgcgg gcccgtgccc agggcgcagg agcagccggg 5340
ttggcctaag ggaccttagt gccgggcgga aaggggactt tgggttgggg attcatgggg 5400
ggagcccatc tggagcttgt caggggagcg agcgcgggga cctggactgg gctgagcatg 5460
gagtgaggag gacgagagca gagagacccc cgggacttca tcaggcctgg cagctgactg 5520
catgtggggt gaaaaaagga agccacagga cagcgcacaa gggtatggtg tggagatgga 5580
ggtggagatg gcacagcagg ccacacagag aagaaaccta cagggaggta gctgggtttg 5640
aggtgcttga ggggcagatg ggtggtctga tgggcaggta gacagaaggg tctgcagccg 5700
gggaggagac tgagatacat gagaccatcc agggagaggg gacccagggg gaagagcaaa 5760
ggaccggatc ctgggaactg gacagttgtg atttggccaa gacagaaaag cctgtgaaag 5820
agaccaaaaa aacccaagtg cagtgtgagg agaggcccgc agagaagagt cttggaagct 5880
gaggggaggt gacctcagca gcacagtgga cagcggtgcc agtgacttgg gaaggtcaga 5940
aaacagaaga tggaaagtgg gtttggaaac cagggagacc tggggagagc aggttggccg 6000
cagcggcagg agctggaatg ggagggggtg catgaggctg agtgtggcgc atcctcctcg 6060
gggctgagat ggattttact tgtcttgggt tccccacggc tgtcacaggg cagtgtctca 6120
gttcattcgt ctttttcctt caggaagtct gggtgtaaag ggatggagag aggtgaggtg 6180
tgtgcagtaa gaggatttct caaggatggg acaggaaggc cttggagctt tggcttcctc 6240
ctgtgaactt gtggggtggg gagcctggtg caccaacctg agggacttga gggagtagta 6300
tcaggatgtg ggattgagcc ctggaccttt tttctagaaa gaggaaaaaa atgaagggag 6360
gaggaggagg aagctgggga gatcacacct ttgattttct tgttcctgga aagtgaaagg 6420
aagttcacct gctatgagtg agaaggtgga cacactgggt ggggatgagg tgagtgacat 6480
gagcttagga aagttgctga ggtaattggt tgagagaggt gttcaaataa aaataacgca 6540
attggcaaaa actgttacta agactttgta gaggcaccaa tcagtgacat ggcagcattt 6600
tctttcacag taatcaactg ccagattgca gacagccctg atgccagcct aaggagtgtg 6660
ggtttctcct ccaggcccgc aggtccccaa cctcactcct ctgaagactc ttctggagat 6720
cctctgtgat gcacagatct ccagactcag tgcccccaga ctcagattcc ctgggtgggg 6780
aggtctgggg atctctgctt gtaatcagct ccctagaggt tcccatgtag ccagataagt 6840
attgtcagaa cactgaagat ttttgaaaaa tgaaaaagag aaggttggag atgtgtcttc 6900
agaagactac taagggtgct ggctagagga gggaccagag gcagggagat gaggtaggaa 6960
actgctatta tttgtcaggg aaattgcaat caaggcatga gttagaacag ggaaaacaca 7020
gaggcaaggg agaggtggaa gggggaggaa agaagtagtg acaattccag ggtggatgtc 7080
cacccaaatc tagaagtaat tgagcaaatg ttttctgggc attagagaag gcaactagaa 7140
caaacaggaa tccttgcctt ggtgaaatgt atttgaactg ggtcagaaat gaggccattg 7200
ggtatcaggc cttaactcca gcgcaccctg gaggtcactg atgtggctcc aggctgacct 7260
gctcctgtca aagaatattg agcaagatgc ctctcgtgga atgttctggg accttaaaac 7320
agatacccaa gtattccccc tgatttcatg gttcccagaa gctctatggg gaagaaattg 7380
taggtaattc acaactgaga tttagacata agttgaatag tgtaatggac attgagttaa 7440
ccgaggtaat gaagtagtga gacacaggtg cccctgaaat aaactcacat tgagggaaga 7500
ggctgacaat gtggatcagt ctgaaaacaa ggcaaaaata caatagggag taagggttgt 7560
gtgtcagttc aagactgtac ttttacctgg cccagcgcca tgttagggta tttgtgttct 7620
ccaggaagta gaaaggaaag aactgagtga ttagggacct agaagactaa tttgagacat 7680
tcctcttgat gagctgttct ctagggtagt cctctgaaag agctgttctc tagtggatct 7740
ccctgaatga actgttctct aggagcactt gacccttttc tgtgtttgtt ttttgttttg 7800
tgtttgtgtt tgtttttgag acaggttctc actttgtctc ccaggctgga gtgctgtggc 7860
accatcatgg ctcactgcag cctcaacctc ctgggctcaa gtgatcctcc tgcctcagcc 7920
tcccatgtag ctagaactac agatacacgt accaccatgt ctggctaatt tatttttctt 7980
tttagagatg ggttctcact atgttgccca ggccggtctc aaaaccctgg gctcaagtga 8040
tcctcatgcc tcaacctccc aaagtgctaa gattataggc atgaccacca tgcctggcct 8100
tttctgcttt ctgaggagga aaaaggtact ggtggcagag atccaaaaga aaagttgcca 8160
gtggcagtgt ggaaattcac ctgagaacaa caggacaagc tggggcacaa atgcaaagat 8220
gcagagggag gcaacacctg gtcatctgtg agaccttcat gggacctgaa gacgcagcac 8280
agaggaggaa cttgaaaaag gacgggattt ctactactca agcatgtagg agctcaggat 8340
attctgtaaa tatgaagatt ttgagttttt gtaggtgagg taaaaaaata cataggtttt 8400
ttacagaata agacatgtaa agctctcttc attttctttg tattttcatg aagttattag 8460
attcacaggc caccataatg ccattgtctg tatatcttaa tttcaagata ttatttgagt 8520
aaattttgct tcctttgtat caagatagaa ctttgaaaag gtaggtaatt tcacagttga 8580
tcaaatattc tttgcccaaa ttacttttgg ttaaaatttc tcctaaatgt gctacagagt 8640
gcaaactctg tctccctgcc attccgctat atacttacta actattattt tattcaagat 8700
catgcatgct ctacttgaag gtctatttct atcttttcaa tgctaccctt acccactagc 8760
ctaatcacat tattcctatt ttcaacatct aggaatcaat tacatagtga acatgcctaa 8820
gaaataataa tctgggcaga tgcagtggct caggcccgta atcccagccc tttgagaggc 8880
cgagcgggtg gatcacttga ggtcaggcgt tggtcaagtg ctcctagaga accaggctga 8940
ccaacatgga gaaaccttgt ctctactaat aatacaaaaa ttagccaggt gaagtggcag 9000
gcacctataa tcccagctat tcgggaggct gaggaaggag aattggttga agcccagagg 9060
tggaggttgc agtgagccaa tattgcgcca ctgcattcca gacttggcaa cagagtgaca 9120
ctccatctca acaaaaagaa agaatgaaag aaagaaagag cgagattatg tctcaaaaaa 9180
aaggaaggaa ggaaggaagg aaggaaggaa ggaaggaagg aaggaaagaa ggacaatctc 9240
aaattctatt tcattatttt tcttccacgc tcctagtcca gcctagggtg aatgtttccc 9300
cctccaagaa ggggcccttg cagcaccaca acctgcttgt ctgccacgtg acggatttct 9360
acccaggcag cattcaagtc cgatggttcc tgaatggaca ggaggaaaca gctggggtcg 9420
tgtccaccaa cctgatccgt aatggagact ggaccttcca gatcctggtg atgctagaaa 9480
tgacccccca gcagggagat gtctacacct gccaagtgga gcacaccagc ctggatagtc 9540
ctgtcaccgt ggagtggagt gagtctctga tgaccctcta gaccccacct ctgaagagca 9600
ggggactctc tggctctggg gtccactcat cttatcttct gcatctatac cctggggcca 9660
tgtccaaacc ccatctttct tctataccag ctcctgagca tagtttgaag ccagggaaat 9720
ggagacttcc tgaccttggc ttaggggttc ctgaagattc atagttctcc cccttgtcag 9780
agaatctagg gacactgact ggtctcgaaa ccctcacact taggaactga cctcacacat 9840
aggaacagtt ctcttccttc agcattttag cctcttctca ggcattttga gaggcaactt 9900
ccagaatcag catttgccac cttgttgagg tcacacccct gttccagata tgagggtggc 9960
tctttctgaa tttcctctta gcaagctttt tccgctgcac tgtcctcatc ccgatatgct 10020
gcatcaggct ccagaatctc agacaggaca tgagtaggga tgcagctggt ggaggtgaca 10080
ctaaacctgg gtctgtcctt cccagaggca cagtctgatt ctgcccggag taagacattg 10140
acgggagctg ggggcttcgt gctggggctc atcatctgtg gagtgggcat cttcatgcac 10200
aggaggagca agaaaggtga gaaagcctgc agggtgagcg ggacttacct tcccctggca 10260
tattcacact tattccacga tgaggggttt gacagaaaag aaatgtcaga aagctctaga 10320
ggccactgat atcagataat cggggaacaa acatgaccta tagcgagaga gggatcccag 10380
gctgggatct taatgcagcc agatgcatga ggtcccaagt actcaggctc ctgcggagcg 10440
tccattgagt gatgggcaat ggaatttggt gggatggaaa tgtttctcta attatctgag 10500
gtggtttcaa tggctgatta tataaccttt cgtctttcat ttcagttcaa cgaggatctg 10560
cataaacagg taatattcct gctttgattt ccttgtgggg tgggttgcag gaggatatga 10620
gtcctttctg tgcattgtaa cactgaggct cctccaggaa gggaatctca ggcatgaacc 10680
cctctttcaa tgtcagcctt caggcaagtg gggaaagagc attgcttggc tccattgctg 10740
aaggaagcag agatcaactc tgttatttat cagcctgaga cgcatcctct caccataatt 10800
tttctctcct ggacttacag gaaggaggct ggcaacctgg gataacttgt cttttacccc 10860
cacagggttc ctgagctcac tgaaaagact attgtgcctt aggaaaagca tttgctgtgt 10920
ttcgttagca tctggctcca ggacagacct tcaacttcca aattggatac tgctgccaag 10980
aagttgctct gaagtcagtt tctatcattc tgctctttga ttcaaagcac tgtttctctc 11040
actgggcctc caaccatgtt cccttcttct tagcaccaca aataatcaaa acccaacatg 11100
actgtttgtt ttcctttaaa aatatgcacc aaatcatctc tcatcacttt tctctgaggg 11160
ttttagtaga cagtaggagt taataaagaa gttcattttg gtttaaacat aggaaagaag 11220
agaaccatga aaatggggat atgttaacta ttgtataatg gggcctgtta cacatgacac 11280
tcttctgaat tgactgtatt tcagtgagct gcccccaaat caagtttagt gccctcatcc 11340
atttatgtct cagaccacta ttcttaacta ttcaatggtg agcagactgc aaatctgcct 11400
gataggaccc atattcccac agcactaatt caacatatac cttactgaga gcatgtttta 11460
tcattaccat taagaagtta aatgaacatc agaatttaaa atcataaata taatctaata 11520
cactttaa 11528
//