Dbfetch
ID LR730404; SV 1; linear; genomic DNA; STD; HUM; 11651 BP. XX AC LR730404; XX PR Project:PRJEB34651; XX DT 24-NOV-2020 (Rel. 144, Created) DT 24-NOV-2020 (Rel. 144, Last updated, Version 1) XX DE Homo sapiens, MICA gene for MHC Class I chain-related gene, cell line DE DKMS-LSL_ID16542914_MICA_2, allele MICA*018:new XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RA Albrecht V., Schmidt H. A., Klussmeier A., Lange V., Putke K.; RT ; RL Submitted (30-SEP-2019) to the INSDC. RL DKMS LIFE SCIENCE LAB, Research & Development, St. Petersburger Str. 2, RL Saxony, 01069 Dresden, Germany XX DR MD5; 8d43fb89605ba83e6a605e3ae8fc1ee1. XX FH Key Location/Qualifiers FH FT source 1..11651 FT /organism="Homo sapiens" FT /mol_type="genomic DNA" FT /cell_line="DKMS-LSL_ID16542914_MICA_2" FT /db_xref="taxon:9606" FT exon 1..89 FT /gene="MICA" FT /allele="MICA*018:new" FT /number=1 FT CDS join(20..89,7037..7291,7566..7853,8441..8719,8820..8951, FT 11504..11631) FT /codon_start=1 FT /transl_table=1 FT /gene="MICA" FT /allele="MICA*018:new" FT /product="MHC Class I chain-related gene" FT /function="antigen presenting molecule" FT /protein_id="VWQ05837.1" FT /translation="MGLGPVFLLLAGIFPFAPPGAAAEPHSLRYNLTVLSWDGSVQSGF FT LAEVHLDGQPFLRCDRQKCRAKPQGQWAEDVLGNKTWDRETRDLTGNGKDLRMTLAHIK FT DQKEGLHSLQEIRVCEIHEDNSTRSSQHFYYDGELFLSQNLETEEWTMPQSSRAQTLAM FT NVRNFLKEDAMKTKTHYHAMHADCLQELRRYLKSGVVLRRTVPPMVNVTRSEASEGNIT FT VTCRASGFYPWNITLSWRQDGVSLSHDTQQWGDVLPDGNGTYQTWVATRICQGEEQRFT FT CYMEHSGNHSTHPVPSGKVLVLQSHWQTFHVSAVAAAAIFVIIIFYVRCCKKKTSAAEG FT PELVSLQVLDQHPVGTSDHRDATQLGFQPLMSDLGSTGSTEGA" FT intron 90..7036 FT /gene="MICA" FT /allele="MICA*018:new" FT /number=1 FT exon 7037..7291 FT /gene="MICA" FT /allele="MICA*018:new" FT /number=2 FT intron 7292..7565 FT /gene="MICA" FT /allele="MICA*018:new" FT /number=2 FT exon 7566..7853 FT /gene="MICA" FT /allele="MICA*018:new" FT /number=3 FT intron 7854..8440 FT /gene="MICA" FT /allele="MICA*018:new" FT /number=3 FT exon 8441..8719 FT /gene="MICA" FT /allele="MICA*018:new" FT /number=4 FT intron 8720..8819 FT /gene="MICA" FT /allele="MICA*018:new" FT /number=4 FT exon 8820..8951 FT /gene="MICA" FT /allele="MICA*018:new" FT /number=5 FT intron 8952..11503 FT /gene="MICA" FT /allele="MICA*018:new" FT /number=5 FT exon 11504..11651 FT /gene="MICA" FT /allele="MICA*018:new" FT /number=6 XX SQ Sequence 11651 BP; 2382 A; 2971 C; 2812 G; 3486 T; 0 other; gggtggcgac gtcggggcca tggggctggg cccggtcttc ctgcttctgg ctggcatctt 60 cccttttgca cctccgggag ctgctgctgg tgagtggcgt tcctggcggt cctcggcgga 120 gcgggagcag tgggacgttt ccgggggtcg ggtgggtagc ggcgagcgct gtgcggtcag 180 ggcggggctc ctgtgccctg tcggtggcgc agggagctgg acgcggcccg ttaccgccac 240 acttcagccc tgcttccccg tcacttttca gtcctcctcg ggatcgcgca tcacctgcac 300 tttctggtct cctcctgctc tttctctcct cgcgtctcct ccgcttcctc tcacttttcg 360 gacaaaccag tccttctgag gcccatgggt tcccgggctg cctccggggc tgctcctgtg 420 aatggcattc gagtgccctt ccagcgcggc cactgaagca gccacaaccc ccggtgctcg 480 gggcggctct caggtccctg aagtcctgtc ctctcccgga gccgacgtgt tctcagctcc 540 tgggccgcag ctcctggagt aggggccctc ctttctcggg acccggagct ggtgcttcct 600 gctgctgtgg ggactgtggg gggtcctgac tctcaagctg aggggttgga gtctgcaggc 660 tccgggcaga ggattcttcc tgcgacttct ctcatcccca gctcattctc ccctcgcctc 720 tggctccgag ggtcctctcc tctctctcat cccaccccta ctaatgacca gtgatctaag 780 gacaccagat tccctctcac ctcctccctg cccatctcag ggcccgctga gtccttttgc 840 cctcccagct ccctgctacc ccttcctgtg tgctgttctc tgatccattt ctagggtgtc 900 ctctgccctc atcccctgtc cccgccaccg aaggtccctc ctgcacccct tatgggcctt 960 tcctacaagc agccttcacc cagtgctgcc cctatgcctc cccgttccca aatgtccctg 1020 actctaactt tctggtgctg ccttttatcc gggggggtct tccctccatc ccactcccct 1080 ccagaccccc aaggggaacc ctgatgctaa tggcagttgg gccttaggca gggcgcaggg 1140 cagcgcagat gccccctccc ctccagtgca gatgcctgct ctggaccctg cctcattgtg 1200 gccccttccc cactccttca tcctcagcct caccctcttg aggaccccac cttccagccc 1260 acaggtgctg gaccatccct ccctggtccc tccgcccctc tccaccttgg gaccttgtgc 1320 tgctcctatc tcttgcccag ctgccttggg ccctcagcac gttctcatct ttcagtggga 1380 aagtgggagt gctggagcat atgacagtgc tgagcatctt tcccaagccc caccctcccc 1440 cagagcaccc tcccctcctg tcctcaccct accccaagtt ctcccacagt cactcctgcc 1500 ccatgctcat gccgccctcc agttcttgct ctgcccatct cccctcccca acccagacct 1560 aaaacaggct gttgggccaa ctgttccttg accttccttc ttttcttttg gttccttgac 1620 cccagtgggc tctcactccc cacaccgcat atctaaaatc tgttttgcct gctcttgggg 1680 tgccactgct ccccctccag cattactcct tttggcaggt ccttcctcag gctgagaatc 1740 tccccctcta ccttggtttt ctctctctgg ccagcacccc caccccttgc tttgttttta 1800 atttttaact tttgtttggg tacgtagtag atatatatgt atatatttat ggggtacatg 1860 ggatattttc acacaggcct acaatatgta ataatcacat cagggtaaat gggttatatc 1920 acaacaagca tttatccttt ctttgtgcta caaacaatcc cattatgctc tttcagttat 1980 ttttaaatgt acaataaatt attgttgact gtactcaccc tgctgtgcta tctactagat 2040 cttattcatt ctaattatat ttttgtaccc attattaacc atccctgctc ccccactccc 2100 cactaccctt ctcagcctct ggtaatcatc attctattgt ctctccccat gaggtccatt 2160 gttttaaatt ttggctgcca caaataagtg agaacatgca aagtttgtct gtctgggcct 2220 ggggcttatt tcacttcaca ggatgacctc cagttctttg caaatgacac gatggctgaa 2280 tagttctcca catacacatg tacaccacat tttctttatc catgcgtctg ttgatggaca 2340 cttagattgc ttgcagatct tggctacttt gaatagtgct gcaataaaca tggaaaagta 2400 gatagctctt taatataccg atttcctttc tttggagtat atgcctaaca gtgggagtgc 2460 tggagcatat gacagctcta ttgtattttt agtttttgga agaacctcca cattgtttcc 2520 catagtggtt gtactagttt acgttcccac caacagtgta catcctcacc agcattcctt 2580 atttctacat cctcgccagc attccttatt gcctgtcttc tggataaaag ccagtttatc 2640 tggggtggga tgttatctcg taggagtttt gatttgcctt catctgttga cgaatgatgt 2700 tgagcacctt ttcatatacc tgtttgccat ttatatgtct tcttttgaga aatgactatt 2760 cagatctttt ctcattttta aattggatta ttatattttt ttttcctata gttgttcgag 2820 ctccttatat gtttcagtta ctgatccttt gtcagatgaa tagtttgaaa atattttctc 2880 ccattcttgg atggtctctt cattttgttt attgtttcct ttgctgtgca gaagcctttt 2940 tacttgatat gatcccattt atgcaatttt actttggtta cctgtgcttg tggggtatta 3000 ctttaaaaat ctttgcccag tccaatatcc tagagagttt ccccaatgtt ttcttgtata 3060 gtttcatagt ttgaggtcat agatttacat ctttaatcca ctttgatttg atttttgtat 3120 atggtgaaag acagggtcta gtttcattct tctgcataag gatatctagt ttccccagca 3180 ccatttttga agagactctc ctttgccaat gtgtgttctt ggtacctttg ttggaaatga 3240 gtttactgta gatgtatgga attgtttctg ggttctctat tctgtttcat tggtctgtgt 3300 gtctgttttt atgccagtat catgctgttt tggttactgt agctctgtag tataatttga 3360 agtcagataa tgtgattcct ctagttttgt tcattttgct caggatagct ttatctattc 3420 tggttttttt gtggttccat atgcatttta ggattatttt tattatttct gtgaagaatg 3480 tcattagtgt tttgataggg attgcattga atctgtagat tactttgggt agtatggata 3540 tttcaacaaa actgattctt ccaatccatg aacgtggact atcttttcca ttttttgtgt 3600 ccttcaattt tttgcatcag tgttttttgt ttttggtttt tgagatggag tttcactctt 3660 gttgcccagg ctagaatgca agggtgtgat cttggctcac cgcaacctcc gcctcccagg 3720 ttcaagcgat tcttctgcct cagcctccca agtagctggg attacaggca tgtgccactg 3780 tgcctggcta attttctatt tttattagag atggggtttc tctatgttgg ccaggctagt 3840 cttgaactcc tgacctcagg tgatccacct gcctcggcct cccaaagtgc tgggattaca 3900 ggcatgagcc accacgccca gccacatcac tgttttatag tttttattgg agaggtcttt 3960 cacttcttca gttaggttta ttcctcagta ttttatttta tttgtagcta ttgtaaatgg 4020 gattcgtttc ttgatttctt tttcagatta tttgctgtta gcactgattt ttgcatgttg 4080 attttgtatc ctgcaacttt actgaatttg ttcttcagtt ctaatggttt tttggtggag 4140 tctttaggtt tttccaaata tcagaccaca tgatctgcaa acaaggataa tttgacttct 4200 tcttttccag ttttaatgcc ctttctttct ttctcctgtc tgattgctct agttaggatc 4260 tgcagtactg tgttgcataa ctgtggtaaa attagtcatc cttgtcttat tccagatctt 4320 agagaaaagg ctttcagttt tcccccattc agtatgttac tagctgtgag tttgtcatat 4380 atggctttta ttatattgag gtctgttcct tgtatactta gttttttgag agtttttatc 4440 atgaagggat gttgaattta tcaaatgctt tttcagtatc aattgaatga tactggcttt 4500 tgtcctttat tctgttgata tgacgtatta cattgattga tttgtgtatg ttaaatcatc 4560 cttgcatacc tggaatacat tccacttgct cataaagaat gatctttttt aatgtattgt 4620 tgaatgtggt ttgctagtat ttccttgacg atttttgcat cggtgttcat cagggatata 4680 ggcctgtagt tttctttttt atgatgtgtc tttgcctggt ttttgtatca ggatattcct 4740 ggctttgtaa aatgagtttg gaagtattcc ctcctcctct atttttcaga acagtttgaa 4800 taggactgac atatgttgtt ctttaaaagt ttaattgtgg taaattatac attacataaa 4860 ttttactgtt ttaaccactt ttaagtgtat actcggtggc attagataca ttcacatttt 4920 tgtgcaaccc aaaactctgt gcccattaat cggtaactcc ccattcctcc ctacctctgg 4980 cccctggtaa ccaccattct actttttgtt tctatgaatt tgaccactct aggtacctca 5040 tttaagcaga atcatgtaat gtttgtcttt ttgtttctgg cttatttcac ttataatatt 5100 tttgaggttc ggtgggcaca gtggctcacg cctggatttc cagcactttg ggaggttgaa 5160 gcaggtggat caccagagtt tcggagttcg aaaccagcct ggccagcctg gccaacatgg 5220 tgaaacccca tctctactaa aaataataaa agttagccgg gcgtgatggc gggtgcctgt 5280 aatcccaact acttggaagg ctgaggcagg agaatcgctt gaatccggga agtggaggtt 5340 gcagtgagct gagatcaggc cactgcactc cagcctgggc aacaagagtg aaattccatc 5400 tccaaaaaaa aaataaaaca ataataataa taatattttt gaggttcatc caagttgtag 5460 tatgggtcag aatttcattc cttttaagga tggataatac tcattatatg tatgtaccac 5520 atcttggtta tccatccctc agacaacgga cacttgggtt acttctacct tttggatatt 5580 ggcaaatatt tcatttcctt tgggtatata tttatttcct ttgggtattt cttttgggta 5640 tatatccaga aatagaagca gtacacaggg gcttcatttt ctctgtctct ttgccaacct 5700 tgctctgtgt gtgtgtgtgt gtgtgtgtgt gtgtgtgtgt gtgtgtaggt gtgtgataac 5760 agccatcctg attggtttca ggtggcatct cattgtggtt tggatttcca ttttcctaat 5820 gagtgctgat attgagcatc ttttcatgtg tttgttgatc atttgtaatt ttctttgaag 5880 aattggccat ttaagtcttt tgcccatttt ttcccccaca tagcttctca tggctacttt 5940 gcccattttt tagtgggttg actgtttttg ttgtttttgt cagacttttt tatatattct 6000 ggaaactaat ctcttatcag atatatgact tgcaatattt atttcatttc ggggttgatt 6060 gctttttcac tctgattgtg tcctttgatg catagatgtt ttgaattttc atcagtctac 6120 tttgtcagtt ctttctattc tatctgtgct ttggtgtcat atccatgaaa gcactgtcaa 6180 atcctatgtc atgaacatta tccccaatgt ttgcttctaa gaaattttta ggttttagtt 6240 cttgagtgta gagtttaggt ctttgattca ttttgagtta atttttgtat atagtgcaaa 6300 ttaagagtcc aattttattt taacaccccc tgcccccaga actatttgct gaaaagatga 6360 gctgactctt tgtcacctgc tcaccccagt ggacactagc tgttccatcc aattgctgtc 6420 ctggggcctt gtcatgccac tcttccactt tgaacccaag cccacaccgt tgctcccctc 6480 tgggatactg accccactat aaacttcact ggggctacaa ccttcctacc ccttgtgcct 6540 catgaccacc ccctcccttg tccccaccat gcccatgatg agtctcttct cgaggcagct 6600 ccccttgcct ccatctcacc ctcacctgtg caccacagcc acactggaca tgggtccctc 6660 tgagcctgag tcccttccca ttcccactgt cccctctggc aagaccttcc ttccaccacc 6720 ttcatgctcc tccctcgccc ctgcagggca gcctctcccc ttggccccta ttcccttagg 6780 gggcttgtgg ccacccagtc cttgcacctg gcctacaagt ttgccatctt cattccccct 6840 tcttctgttc atcagccccc tcctctatcc tcccaccctc acagttttct ttgtatatga 6900 aatcctcgtt cttgtccctt tgcccgtgtg catttcctgc ctcctcagga aggttgggac 6960 agcagacctg tgtgttaaac atcaatgtga agttacttcc aggaagaagt ttcacctgtg 7020 atttcctctt ccccagagcc ccacagtctt cgttataacc tcacggtgct gtcctgggat 7080 ggatctgtgc agtcagggtt tctcgctgag gtacatctgg atggtcagcc cttcctgcgc 7140 tgtgacaggc agaaatgcag ggcaaagccc cagggacagt gggcagaaga tgtcctggga 7200 aataagacat gggacagaga gaccagggac ttgacaggga acggaaagga cctcaggatg 7260 accctggctc atatcaagga ccagaaagaa ggtgagagtc ggcaggggca agagtgactg 7320 gagaggcctt ttccagaaaa gttaggggca gagagcgggg acctgtatct acccactgga 7380 tctggctcag gctgggggtg aggaatgggg gtcagtggaa ctcagcaggg aggtgagccg 7440 gcactcagcc cacacaggga ggcatggagg agggccaggg aggcgtaccc cctgggctga 7500 gttcctcact tgggtggaaa ggtgatgggt tcgggaatgg agaagtcact gctgggtggg 7560 ggcaggtttg cattccctcc aggagattag ggtctgtgag atccatgaag acaacagcac 7620 caggagctcc cagcatttct actacgatgg ggagctcttc ctctcccaaa acctggagac 7680 tgaggaatgg acaatgcccc agtcctccag agctcagacc ttggccatga acgtcaggaa 7740 tttcttgaag gaagatgcca tgaagaccaa gacacactat cacgctatgc atgcagactg 7800 cctgcaggaa ctacggcgat atctaaaatc cggcgtagtc ctgaggagaa caggtaccga 7860 cgctggccag gggctctcct ctccctccaa ttctgctaga gttgcctcac ctcccagatg 7920 tgtccaggga aaccctccct gtgctatgga tgaaggcatt tcctgttggc acatcgtgtc 7980 ctgattttcc tctattgtta gagccactgg ataaagacag tgggtcaggg actggaccat 8040 ccagtgttgt aatcagggca agtagaggac cctccgacag aatcctgagc ctggggtggg 8100 tgtcaggcag gagaggaagg cttcagggcc agggctgccc cctctgcctc ccagcctgcc 8160 catcctggag agttccctcc tggccccaca acccaggagt ccacccctga catccccctc 8220 ctcagcatca atgtggggat cccagagcct gaggccacag tcccatggcc catcctcctg 8280 ccagcctgga agaactgggc cccagagtga ggacagactt gcaggtcagg ggtcccagag 8340 ggcttcagcc agagtgagaa cagtgaagag aaacagccct gttcctctcc cctccttaga 8400 ggggagcagg gcttcactgg ctctgccctt tcttctccag tgccccccat ggtgaatgtc 8460 acccgcagtg aggcctcaga gggcaacatt accgtgacat gcagggcttc tggcttctat 8520 ccctggaata tcacactgag ctggcgtcag gatggggtat ctttgagcca cgacacccag 8580 cagtgggggg atgtcctgcc tgatgggaat ggaacctacc agacctgggt ggccaccagg 8640 atttgccaag gagaggagca gaggttcacc tgctacatgg aacacagcgg gaatcacagc 8700 actcaccctg tgccctctgg tgagcctagg gtgaccctgg agagggtcag accagggtag 8760 ggacagcagg gatggctgtg gctctctgcc cagtgtataa caagtccctt ttttttcagg 8820 gaaagtgctg gtgcttcaga gtcattggca gacattccat gtttctgctg ttgctgctgc 8880 tgctattttt gttattatta ttttctatgt ccgttgttgt aagaagaaaa catcagctgc 8940 agagggtcca ggtgagaaaa gcgggcagtt tctggagatg gtaaggcccc tgtctgggca 9000 gtagggtccc ctcattgctc ctgcaaagat aggcatgttg gtgacaaggc ttctgtaaca 9060 ggggatgaaa gttggggaat ttgggaaggg aatgggggca gcatctccat ctacacccat 9120 aagtgctgcc caagcgaggg tcaaacgccc agctgtggca tcttcctgct gcaggtgagg 9180 agtgggcagc agggagggct gcggcgcctg ctctgtcccc atcccggtct ctgtgtctct 9240 tggactcact agggcgcatc caggtggggt gagctgggaa tcacgtgctg aatgctgagg 9300 acctggatga tcacggcctc agagggagca aatagtaaag gtggctgtga tctggggagg 9360 gccagaaact ggagaggaat ctgaggagag gcggtgcccc tattcccttc ctctctgcat 9420 ccctctcccc tgtttctcca gccatcgggg cggacaccga gaaaaagacc tatgaggccc 9480 agcctggggg ccctgcctgt gtagcccttt ggagacccct tgtaacaggg agggtcctga 9540 gcacacatgg ccatctctgt ccacttttca gctccccatg cacctcctcc aggagctttc 9600 ttggggttgt cgtgtcctct gcaccattcg aggccctact ctttccaggt tcccacagcc 9660 tggtctccct gagtttcttg cagatgagat ggatgagtag ataagcagat gtccctgggc 9720 catttgagga gtggggccca gcccctcatc agggcagctg tggtccctgt tttcacccta 9780 cctccgagtg ttttcttctc cagtccctga gggacacagt cctcagggcc catgtttttg 9840 gggctttaat ctgtgctctg tggcctcacc ttgccctccc tgagccaatt tccctttcta 9900 aaggtggtca ctgcctggaa agtttggagt aagggacggt cagaatcatt tcccctacag 9960 tcaggttgtt tgatggggga tgaaaagaga cagcaggaag ttttgtgttt ctgcaaagac 10020 agaagcagtt caggggacag taagaggctg gggtgtccag gagggtgtgt ctggcagtag 10080 ggtcgctggt ttctcatcct tgaacctaat tgcactgtca gtcggcccct caggcctgag 10140 cagatgggaa ggtttgtccc ctgccctgca gtaagagggc cctgtccagg aggcacccat 10200 aacaggggca gtgcaggtct gtggtcgctc ctgctctcac ctgtggcgtc tcccgtagag 10260 ggattatcag ttctggttcc ctgtgggcag gaatggtttc ctcataggtc actggagttt 10320 tggccaggaa aagagtatga agttcatgtg ccagtttctc aaaattcctg ctttcaatgt 10380 tgatgtcaag caaagatatt cgtaatttca gctctataat cttaatagga tttcctctaa 10440 tattgtaatg catcttatat gaaacaggaa cacaaatttc tcaaaattcc tgcgatgtcc 10500 aataaagatt ttcataattt cggctctcca atcttaatag gatttcctaa tactgtaaag 10560 catattaaat gaaacaggaa cccaaatttg gagccccctc tccaggaggt tctgtgtgga 10620 gatggtggct gtggcagtgg cagttcccag gtgcagaggg tgggcagagg cagcctcagg 10680 ctaaggggtc tcccctactc cacatggaga aaatcccttg taggttgcaa gggcagtggc 10740 ctgggtggaa tccctgctag ggacagagca ggaaggcctc gcagcctcac caagcagcag 10800 ccctggggtg gagctgcgtt tccagggtta agcggaccag gcaggagcag tggttactca 10860 acagcaggtc acaggcttgg gttgtgaggg tcaggagagg ccaggcctcc tcgagcaagg 10920 tgggggtccc agggtcaggt caggtgcaga tcctgtggca gccacgtctt tccatgctgg 10980 gcctgctggg ccccccaggc tttctgatgg ggtccccagt taggagctgc ctgctcaggg 11040 ctgggagggg aggagcgctg agctgcagat agagggcaga gcccacagtg ggcagggcct 11100 gccctggagt gtaggtgcct ctgcaggaga ggagggcctg gggactgaga gcaagggtca 11160 gggcctctct ttgaggaggc ctctcactgt aacaggactg gtcaggcctg agaggaggtc 11220 actgggttcc ctcttgggtc ttgtccttta gtcttggggc cctttccctc cctgcacgat 11280 gagtggtggg cacagggcag gggctgatgt tgatggagtg atgggaggga actggtaggg 11340 gctgggaaaa gcaaggaggg aggaagaaaa aagtgggggc ctcatcttcc ctcagagaaa 11400 gggcgaatct ggttttggag caactgaaga gagaaaagtc cccagggaat aaacacaaca 11460 ctgcacccag tggagcattt acccgtttcc ctcttttctc cagagctcgt gagcctgcag 11520 gtcctggatc aacacccagt tgggacgagt gaccacaggg atgccacaca gctcggattt 11580 cagcctctga tgtcagatct tgggtccact ggctccactg agggcgccta gactctacag 11640 ccaggcagct g 11651 //