Dbfetch
ID LR597584; SV 1; linear; genomic DNA; STD; HUM; 11548 BP. XX AC LR597584; XX PR Project:PRJEB33104; XX DT 23-JUL-2020 (Rel. 144, Created) DT 23-JUL-2020 (Rel. 144, Last updated, Version 1) XX DE Homo sapiens, MICA pseudogene, cell line DKMS-LSL_ID17369423_MICA_1, null DE allele MICA*017:new XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RA Albrecht V., Schmidt H. A., Klussmeier A., Lange V., Putke K.; RT ; RL Submitted (27-JUN-2019) to the INSDC. RL DKMS LIFE SCIENCE LAB, Research & Development, St. Petersburger Str. 2, RL Saxony, 01069 Dresden, Germany XX DR MD5; 40b36c4c0b87806fa74b3273d94b6a55. XX FH Key Location/Qualifiers FH FT source 1..11548 FT /organism="Homo sapiens" FT /mol_type="genomic DNA" FT /cell_line="DKMS-LSL_ID17369423_MICA_1" FT /db_xref="taxon:9606" FT exon 1..89 FT /gene="MICA" FT /allele="MICA*017:new" FT /number=1 FT CDS join(20..89,6929..7183,7458..7745,8333..8610,8712..8849, FT 11401..11528) FT /codon_start=1 FT /transl_table=1 FT /gene="MICA" FT /allele="MICA*017:new" FT /note="MHC Class I chain-related gene null allele" FT /pseudogene="allelic" FT intron 90..6928 FT /gene="MICA" FT /allele="MICA*017:new" FT /number=1 FT exon 6929..7183 FT /gene="MICA" FT /allele="MICA*017:new" FT /number=2 FT intron 7184..7457 FT /gene="MICA" FT /allele="MICA*017:new" FT /number=2 FT exon 7458..7745 FT /gene="MICA" FT /allele="MICA*017:new" FT /number=3 FT intron 7746..8332 FT /gene="MICA" FT /allele="MICA*017:new" FT /number=3 FT exon 8333..8610 FT /gene="MICA" FT /allele="MICA*017:new" FT /number=4 FT intron 8611..8711 FT /gene="MICA" FT /allele="MICA*017:new" FT /number=4 FT exon 8712..8849 FT /gene="MICA" FT /allele="MICA*017:new" FT /number=5 FT intron 8850..11400 FT /gene="MICA" FT /allele="MICA*017:new" FT /number=5 FT exon 11401..11548 FT /gene="MICA" FT /allele="MICA*017:new" FT /number=6 XX SQ Sequence 11548 BP; 2361 A; 2951 C; 2794 G; 3442 T; 0 other; gggtggcgac gtcggggcca tggggctggg cccggtcttc ctgcttctgg ctggcatctt 60 cccttttgca cctccgggag ctgctgctgg tgagtggcgt tcctggcggt cctcggcgga 120 gcgggagcag tgggacgttt ccgggggtcg ggtgggtagc ggcgagcgct gtgcggtcag 180 ggcggggctc ctgtgcgctg tcggtggcgc agggagctgg acgcggcccg ttaccgccac 240 acttcagccc tgcttccccg tcacttttca gtcctcctcg ggatcgcgca tcacctgcac 300 tttctggtct cctcctgctc tttctctcct cgcgtctcct ccgcttcctc tcacttttcg 360 gacaaaccag tccttctgag gcccatgggt tcccgggctg cctccggggc tgctcctgtg 420 aatggcattc gagtgccctt ccagcgcggc cactgaagca gccacaaccc ccggtgctcg 480 gggcggctct caggtccctg aagtcctgtc ctctcccgga gccgacgtgt tctcagctcc 540 tgggccgcag ctcctggagt aggggccctc ctttctcggg acccggagct ggtgcttcct 600 gctgctgtgg ggactgtggg gggtcctgac tctcaagctg aggggttgga gtctgcaggc 660 tccgggcaga ggattcttcc tgcgacttct ctcatcccca gctcattctc ccctcgcctc 720 tggctccgag ggtcctctcc tctctctcat cccaccccta ctaatgacca gtgatctaag 780 gacaccagat tccctctcac ctcctccctg cccatctcag ggcccgctga gtccttttgc 840 cctcccagct ccctgctacc ccttcctgtg tgctgttctc tgatccattt ctagggtgtc 900 ctctgccctc atcccctgtc cccgccaccg aaggtccctc ctgcacccct tatgggcctt 960 tcctacaagc agccttcacc cagtgctgcc cctatgcctc cccgttccca aatgtccctg 1020 actctaactt tctggtgctg ccttttatcc gggggggtct tccctccatc ccactcccct 1080 ccagaccccc aaggggaacc ctgatgctaa tggcagttgg gccttaggca gggcgcaggg 1140 cagcgcagat gccccctccc ctccagtgca gatgcctgct ctggaccctg cctcattgtg 1200 gccccttccc cactccttca tcctcagcct caccctcttg aggaccccac cctccagccc 1260 acaggtgctg gaccatccct ccctggtccc tccgcccctc tccaccttgg gaccttgtgc 1320 tgctcctatc tcttgcccag ctgccttggg ccctcagcac gttctcatct ttcagtggga 1380 aagtgggagt gctggagcat atgacagtgc tgagcatctt tcccaagccc caccctcccc 1440 cagagcaccc tcccctcctg tcctcaccct accccaagtt ctcccacagt cactcctgcc 1500 ccatgctcat gccgccctcc agttcttgct ctgcccatct cccctcccca acccagacct 1560 aaaacaggct gttgggccaa ctgttccttg accttccttc ttttcttttg gttccttgac 1620 cccagtgggc tctcactccc cacaccgcat atctaaaatc tgttttgcct gctcttgggg 1680 tgccactgct ccccctccag cattactcct tttggcaggt ccttcctcag gctgagaatc 1740 tccccctcta ccttggtttt ctctctctgg ccagcacccc caccccttgc tttgttttta 1800 atttttaact tttgtttggg tacgtagtag atatatatgt atatatttat ggggtacatg 1860 ggatattttc acacaggcct acaatatgta ataatcacat cagggtaaat gggttatatc 1920 acaacaagca tttatccttt ctttgtgcta caaacaatcc cattatgctc tttcagttat 1980 ttttaaatgt acaataaatt attgttgact gtactcaccc tgctgtgcta tctactagat 2040 cttattcatt ctaattatat ttttgtaccc attattaacc atccctgctc ccccactccc 2100 cactaccctt ctcagcctct ggtaatcatc attctattgt ctctccccat gaggtccatt 2160 gttttaaatt ttggctgcca caaataagtg agaacatgca aagtttgtct gtctgggcct 2220 ggggcttatt tcacttcaca ggatgacctc cagttctttg caaatgacac gatggctgaa 2280 tagttctcca catacacatg tacaccacat tttctttatc catgcgtctg ttgatggaca 2340 cttagattgc ttgcagatct tggctacttt gaatagtgct gcaataaaca tggaaaagta 2400 gatagctctt taatataccg atttcctttc tttggagtat atgcctaaca gtgggagtgc 2460 tggagcatat gacagctcta ttgtattttt agtttttgga agaacctcca cattgtttcc 2520 catagtggtt gtactagttt acgttcccac caacagtgta catcctcacc agcattcctt 2580 atttctacat cctcgccagc attccttatt gcctgtcttc tggataaaag ccagtttatc 2640 tggggtggga tgttatctcg taggagtttt gatttgcctt cttctgttga cgaatgatgt 2700 tgagcacctt ttcatatacc tgtttgccat ttatatgtct tcttttgaga aatgactatt 2760 cagatctttt ctcattttta aattggatta ttatattttt ttttcctata gttgttcgag 2820 ctccttatat gtttcagtta ctgatccttt gtcagatgaa tagtttgaaa atattttctc 2880 ccattcttgg atggtctctt cattttgttt attgtttcct ttgctgtgca gaagcctttt 2940 tacttgatat gatcccattt atgcaatttt actttggtta cctgtgcttg tggggtatta 3000 ctttaaaaat ctttgcccag tccaatatcc tagagagttt ccccaatgtt ttcttgtata 3060 gtttcatagt ttgaggtcat agatttacat ctttaatcca ctttgatttg atttttgtat 3120 atggtgaaag acagggtcta gtttcattct tctgcataag gatatctagt ttccccagca 3180 ccatttttga agagactctc ctttgccagt gtgtgttctt ggtacctttg ttggaaatga 3240 gtttactgta gatgtatgga attgtttctg ggttctctat tctgtttcat tggtctgtgt 3300 gtctgttttt atgccagtat catgctgttt tggttactgt agctctgtag tataatttga 3360 agtcagataa tgtgattcct ctagttttgt tcattttgct caggatagct ttatctattc 3420 tggttttttt gtggttccat atgcatttta ggattatttt tattatttct gtgaagaatg 3480 tcattagtgt tttgataggg attgcattga atctgtagat tactttgggt agtatggata 3540 tttcaacaaa actgattctt ccaatccatg aacgtggact atcttttcca ttttttgtgt 3600 ccttcaattt tttgcatcag tgttttttgt ttttggtttt tgagatggag tttcactctt 3660 gttgcccagg ctagaatgca agggtgtgat cttggctcac cgcaacctcc gcctcccagg 3720 ttcaagcgat tcttctgcct cagcctccca agtagctggg attacaggca tgtgccactg 3780 tgcctggcta attttctatt tttattagag atggggtttc tctatgttgg ccaggctagt 3840 cttgaactcc tgacctcagg tgatccacct gcctcggcct cccaaagtgc tgggattaca 3900 ggcatgagcc accacgccca gccacatcac tgttttatag tttttattgg agaggtcttt 3960 cacttcttca gttaggttta ttcctcagta ttttatttta tttgtagcta ttgtaaatgg 4020 gattcgtttc ttgatttctt tttcagatta tttgctgtta gcactgattt ttgcatgttg 4080 attttgtatc ctgcaacttt actgaatttg ttcttcagtt ctaatggttt tttggtggag 4140 tctttaggtt tttccaaata tcagaccaca tgatctgcaa acaaggataa tttgacttct 4200 tcttttccag ttttaatgcc ctttctttct ttctcctgtc tgattgctct agttaggatc 4260 tgcagtactg tgttgcataa ctgtggtaaa attagtcatc cttgtcttat tccagatctt 4320 agagaaaagg ctttcagttt tcccccattc agtatgttac tagctgtgag tttgtcatat 4380 atggctttta ttatattgag gtctgttcct tgtatactta gttttttgag agtttttatc 4440 atgaagggat gttgaattta tcaaatgctt tttcagtatc aattgaatga tactggcttt 4500 tgtcctttat tctgttgata tgacgtatta cattgattga tttgtgtatg ttaaatcatc 4560 cttgcatacc tggaatacat tccacttgct cataaagaat gatctttttt aatgtattgt 4620 tgaatgtggt ttgctagtat ttccttgacg atttttgcat cggtgttcat cagggatata 4680 ggcctgtagt tttctttttt atgatgtgtc tttgcctggt ttttgtatca ggatattcct 4740 ggctttgtaa aatgagtttg gaagtattcc ctcctcctct atttttcaga acagtttgaa 4800 taggactgac atatgttgtt ctttaaacgt ttaattgtgg taaattatac attacataaa 4860 ttttactgtt ttaaccgctt ttaagtgtat actcggtggc attagataca ttcacatttt 4920 tgtgcaaccc aaaactctgt gcccattaat cggtaactcc ccattcctcc ctacctctgg 4980 cccctggtaa ccaccattct actttttgtt tctatgaatt tgaccactct aggtacctca 5040 tttaagccga gtcatgtaat gtttgtcttt ttgtttctgg cttatttcac ttataatatt 5100 tttgaggttc ggtgggcaca gtggctcacg cctggatttc cagcactttg ggaggctgaa 5160 gcaggtggat cacctgagtt tcggagttcg aaaccagcct ggccaacatg gtgaaacccc 5220 atctctacta aaaataataa aagttagccg ggcgtgatgg cgggtgcctg taatcccaac 5280 tacttgggag gctgaggcag gagaatcgct tgaatccggg aagtggaggt tgcagtgagc 5340 tgagatcagg ccactgcact ccagcctggg caacaagagt gaaattccat ctccaaaaaa 5400 aaaaataaaa caataataat aataatattt ttgaggttca tccaagttgt agtatgggtc 5460 agaatttcat tccttttaag gatggataat actcattata tgtatgtacc acatcttggt 5520 tatccatccc tcagacaatg gacacttggg ttacttctac cttttggata ttggcaaata 5580 tttcatttcc tttgggtata tatttatttc ctttgggtat ttcttttggg tatatatcca 5640 gaaatagaag cagtacacag gggcttcatt ttctctgtct ctttgccaac cttgctctgt 5700 gtgtgtgtgt atgtgtgtgt gtaggtgtgt gataacagcc atcctgattg gtttcaggtg 5760 gcatctcatt gtggtttgga tttgcatttt cctaatgagt gctgatattg agcatctttt 5820 catgtgtttg ttgatcattt gtaattttct ttgaagaatt ggccatttaa gtcttttgcc 5880 cattttttcc cccacatagc ttctcttatc agatatatga cttgcaatat ttatttcatt 5940 tcggggttga ttgctttttc actctgattg tgccctttga tgcatagatg ttttgaattt 6000 tcatcagtct actttgtcag ttctttctat tctatctgtg ctttggtgtc atatccatga 6060 aagcactgtc aaatcctatg tcatgaacat tatccccaat gtttgcttct aagaaatttt 6120 taggttttag ttcttgagtg tagagtttag gtctttgatt cattttgagt taatttttgt 6180 atatagtgca aattaagggt ccaattttat tttaacaccc cctgccccca gaactatttg 6240 ctgaaaagat caactgactc tttgtcacct gctcacccca gtggacacta gctgttccat 6300 ccaattgctg tcctggggcc ttgtcatgcc actcttccac tttgaaccca agcccacatc 6360 attgctcccc tctgggatac tgaccccact ataaacttca ctggggctac aaccttccta 6420 ccctttgtgc ctcatgacca ccccctccct tgtccccgcc atgcccatga tgagtctctt 6480 ctcgaggcag ctccccttgc ctccatctca ccctcaccta tgcaccacag ccacactgga 6540 catgggtccc tctgagcctg agtcccttcc cattcccacc gtcccctctg gcaagacctt 6600 ccttccacca ccttcatgct cctcccttgc ccctgcaggg cagcctctcc ccttggcccc 6660 tattccctta gggggcttgt ggccacccag tccttgcacc tggcctacaa gtttgccatc 6720 ttcattcccc cttcttctgt tcatcagccc cctcctctat cctcccaccc tcacagtttt 6780 ctttgtatat gaaatcctcg ttcttgtccc tttgcccgtg tgcatttcct gcctcctcag 6840 gaaggttggg acagcagacc tgtgtgttaa acatcaatgt gaagttactt ccaggaagaa 6900 gtttcacctg tgatttcctc ttccccagag ccccacagtc ttcgttataa cctcacggtg 6960 ctgtccgggg atggatctgt gcagtcaggg tttctcgctg aggtacatct ggatggtcag 7020 cccttcctgc gctgtgacag gcagaaatgc agggcaaagc cccagggaca gtgggcagaa 7080 gatgtcctgg gaaataagac atgggacaga gagaccaggg acttgacagg gaacggaaag 7140 gacctcagga tgaccctggc tcatatcaag gaccagaaag aaggtgagag tcggcagggg 7200 caagagtgac tggagaggcc ttttccagaa aagttagggg cagagagcag ggacctgtat 7260 ctacccactg gatctggctc aggctggggg tgaggaatgg gggtcagtgg aactcagcag 7320 ggaggtgagc cggcactcag cccacacagg gaggcatgga ggagggccag ggaggcgtac 7380 cccctgggct gagttcctca cttgggtgga aaggtgatgg gttcgggaat ggagaagtca 7440 ctgctgggtg ggggcaggct tgcattccct ccaggagatt agggtctgtg agatccatga 7500 agacaacagc accaggagct cccagcattt ctactacgat ggggagctct tcctctccca 7560 aaacctggag actgaggaat ggacaatgcc ccagtcctcc agagctcaga ccttggccat 7620 gaacgtcagg aatttcttga aggaagatgc cgtgaagacc aagacacact atcacgctat 7680 gcatgcagac tgcctgcagg aactacggcg atatctaaaa tccggcgtag tcctgaggag 7740 aacaggtacc gacgctggcc aggggctctc ctctccctcc aattctgcta gagttgcctc 7800 acctcccaga tgtgtccagg gaaaccctcc ctgtgctatg gatgaaggca tttcctgttg 7860 gcacatcgtg tcctgatttt cctctattgt tagagccact ggataaagac agtgggtcag 7920 ggactggacc atccagtgtt gtaatcaggg caagtagagg accctccgac agaatcctga 7980 gcctggggtg ggtgtcaggt aggagaggaa ggcttcaggg ccagggctgc cccctctgcc 8040 tcccagcctg cccatcctgg agagttccct cctggcccca caacccagga gtccacccct 8100 gacatccccc tcctcagcat caatgtgggg atcccagagc ctgaggccac agtcccatgg 8160 cccatcctcc tgccagcctg gaagaactgg gccccagaat gaggacagac ttgcaggtca 8220 ggggtcccag agggcttcag ccagagtgag aacagtgaag agaaacagcc ctgttcctct 8280 cccctcctta gaggggagca gggcttcact ggctctgccc tttcttctcc agtgcccccc 8340 atggtgaatg tcacccgcag cgaggcctca gagggcaaca ttaccgtgac atgcagggct 8400 tctggcttct atccctggaa tatcacactg agctggcgtc aggatggggt atctttgagc 8460 cacgacaccc agcagtgggg ggatgtcctg cctgatggga atggaaccta ccagacctgg 8520 gtggccacca ggatttgcca aggagaggag cagaggttca cctgctacat ggaacacagc 8580 gggaatcaca gcactcacgc tgtgccctct ggtgagccta gggtgacgct ggagagggtc 8640 agaccagggt agggacagca gggatggctg tggctctctg cccagtgtat aacaagtccc 8700 ttttttttca gggaaagtgc tggtgcttca gagtcattgg cagacattcc atgtttctgc 8760 tgttgctgct gctgctgctg ctatttttgt tattattatt ttctatgtct gttgttgtaa 8820 gaagaaaaca tcagctgcag agggtccagg tgagaaaagc gggcagtttc tggagatggt 8880 aaggcccctg tctgggcagt agggtcccct cattgctcct gcaaagatag gcatgttggt 8940 gacaaggctt ctgtaacagg ggatgaaagt tggggaattt gggaagggaa tgggggcagc 9000 atctccatct acacccataa gtgctgccca agcgagggtc aaacgcccag ctgtggcatc 9060 ttcctgctgc aggtgaggag tgggcagcag ggagggctgc ggcgcctgct ctgtccccat 9120 cccggtctct gtgtctcttg gactcactag ggcgcatcca ggtggggtga gctgggaatc 9180 acgtgctgaa tgctgaggac ctggatgatc acggcctcag agggagcaaa tagtaaaggc 9240 agctgtgatc tggggagggc cagaaactgg agaggaatct gaggagaggc ggtgccccta 9300 ttcccttcct ctctgcatcc ctctcccctg tttctccagc cattggggcg gacaccaaga 9360 aaaagaccta tgaggcccag cctgggggcc ctgcctgtgt agccctttgg agaccccttg 9420 taacagggag ggtcctgagc acacatggcc atctctgtcc acttttcagc tccccatgca 9480 cctcctccag gagctttctt ggggttgtcg tgtcctctgc accattcgag gccctactct 9540 ttccaggttc ccacagcctg gtctccctga gtttcttgca gatgagatgg atgagtagat 9600 aagcagatgt ccctgggcca tttgaggagt ggggcccagc ccctcatcag ggcagctgtg 9660 gtccctgttt tcatcctacc tccgagtgtt ttcttctcca gtccctgagg gacacagtcc 9720 tcagggccca tgtttttggg gctttaatct gtgctctgtg gcctcacctt gccctccctg 9780 agccaatttc cctttctaaa ggtggtcact gcctggtaag tttggagtaa gggacggtca 9840 gaatcatttc ccctacagtc aggttgtttg atgggggatg aaaagagaca gcaggaagtt 9900 ttgtgtttct gcaaagacag aagcagttca ggggacagta agaggctggg gtgtccagga 9960 gggtgtgtct ggcagtaggg tcactggttt ctcatccttg aacctaattg cactgtcaat 10020 tggcccctca ggcctgagca gatgggaagg tttgtcccct gccctgcagc aagagggccc 10080 tgtccaggag gcacccacaa caggggcagt gcaggtctgt ggtcactcct gctctcacct 10140 gtggcgtctc ccgtagaggg attgtcagtt ctggttccct gtgggcagga atggtttcct 10200 cataggtcac tggagttttg gccaggaaaa gagtatgaag ttcatgtgcc agtttctcaa 10260 aattcctgct ttcaatgttg atgtccagta aagatattcg taatttcagc tctataatct 10320 taataggatt tcctctaata ttgtgaagca tattatatga aacaggaaca caaatttctc 10380 aaaattcctg cgatgtccaa taaagatttt cataatttca gctctgcaat cttaatagga 10440 tttcctaata ctgtaaagca tattaaatga aacaggaact caaatttgga gccccctctc 10500 caggaggttc tgtgtggaga tggtggctgt ggcagtggca gttcccaggt gcagagggtg 10560 ggcagaggca gcctcaggct aaggggtctc ccctactcca catggagaaa atcccttgta 10620 ggttgctagg gcagtggccg ggtggaatcc ctgctaggga cagagcagga aggcctcgca 10680 gcctcaccaa gcagcagccc tggggtggag ctgcgtttcc agggttaagc ggaccaggca 10740 ggagtagcgg ttactcaaga gcaggtcaca ggcttgggtt gtgagggtca ggagaggcca 10800 ggcctcctcg agcaaggtgg gggtcccagg gtcaggtcag gtgcagatcc tgtggcagcc 10860 acgtctttcc atgctgggcc tgctgggccc cccaggcttc ctgatggggt ccccagttag 10920 gagctgcctg ctcagggctg ggaggggagg agcactgagc tgcagataga gggcagagcc 10980 cacagtgggc agggtctgcc ctggtgtgta ggtgcctttg caggagagga gggcctgggg 11040 actgagagca agggtcaggg cctctctttg gggaggcctc tcactgtaac aggactggtc 11100 aggcctgaga ggagggcact gggttccctc ttgggtcttg tcctttagtc ttggggccct 11160 ttccctccct gcacgatgag tggtgggcac agggcagggg ctgatgttga tggagtgatg 11220 ggagggaact ggcaggggct gggaaaagca aggagggagg aagaaaaaag tgggggcctc 11280 atcttccctc agagaaaggg tgaatctggt tttggagcaa ctgaagagag aaaagtcccc 11340 agggaataaa cacaacactg cacccagtgg agcatttacc cgtttccctc ttttctccag 11400 agctcgtgag cctgcaggtc ctggatcaac acccagttgg gacgagtgac cacagggatg 11460 ccacacagct cggatttcag cctctgatgt cagctcttgg gtccgctggc tccactgagg 11520 gtgcctagac tctacagcca ggcggctg 11548 //