Dbfetch
ID LR596356; SV 1; linear; genomic DNA; STD; HUM; 11652 BP. XX AC LR596356; XX PR Project:PRJEB32988; XX DT 23-JUL-2020 (Rel. 144, Created) DT 23-JUL-2020 (Rel. 144, Last updated, Version 1) XX DE Homo sapiens, MICA gene for MHC Class I chain-related gene, cell line DE DKMS-LSL_ID15955800_MICA_2, allele MICA*001:new XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RA Albrecht V., Schmidt H. A., Klussmeier A., Lange V., Putke K.; RT ; RL Submitted (18-JUN-2019) to the INSDC. RL DKMS LIFE SCIENCE LAB, Research & Development, St. Petersburger Str. 2, RL Saxony, 01069 Dresden, Germany XX DR MD5; ed4a2035235789213d651ba83f353b44. XX FH Key Location/Qualifiers FH FT source 1..11652 FT /organism="Homo sapiens" FT /mol_type="genomic DNA" FT /cell_line="DKMS-LSL_ID15955800_MICA_2" FT /db_xref="taxon:9606" FT exon 1..89 FT /gene="MICA" FT /allele="MICA*001:new" FT /number=1 FT CDS join(20..89,7039..7293,7568..7855,8443..8721,8822..8953, FT 11505..11632) FT /codon_start=1 FT /transl_table=1 FT /gene="MICA" FT /allele="MICA*001:new" FT /product="MHC Class I chain-related gene" FT /function="antigen presenting molecule" FT /protein_id="VUE12294.1" FT /translation="MGLGPVFLLLAGIFPFAPPGAAAEPHSLRYNLTVLSWDGSVQSGF FT LTEVHLDGQPFLRCDRQKCRAKPQGQWAEDVLGNKTWDRETRDLTGNGKDLRMTLAHIK FT DQKEGLHSLQEIRVCEIHEDNSTRSSQHFYYDGELFLSQNLETEEWTMPQSSRAQTLAM FT NVRNFLKEDAMKTKTLYHAMHADCLQELRRYLKSGVVLRRTVPPMVNVTRSEASEGNIT FT VTCRASGFYPWNITLSWRQDGVSLSHDTQQWGDVLPDGNGTYQTWVATRICQGEEQRFT FT CYMEHSGNHSTHPVPSGKVLVLQSHWQTFHVSAVAAAAIFVIIIFYVRCCKKKTSAAEG FT PELVSLQVLDQHPVGTSDHRDATQLGFQPLMSDLGSTGSTEGA" FT intron 90..7038 FT /gene="MICA" FT /allele="MICA*001:new" FT /number=1 FT exon 7039..7293 FT /gene="MICA" FT /allele="MICA*001:new" FT /number=2 FT intron 7294..7567 FT /gene="MICA" FT /allele="MICA*001:new" FT /number=2 FT exon 7568..7855 FT /gene="MICA" FT /allele="MICA*001:new" FT /number=3 FT intron 7856..8442 FT /gene="MICA" FT /allele="MICA*001:new" FT /number=3 FT exon 8443..8721 FT /gene="MICA" FT /allele="MICA*001:new" FT /number=4 FT intron 8722..8821 FT /gene="MICA" FT /allele="MICA*001:new" FT /number=4 FT exon 8822..8953 FT /gene="MICA" FT /allele="MICA*001:new" FT /number=5 FT intron 8954..11504 FT /gene="MICA" FT /allele="MICA*001:new" FT /number=5 FT exon 11505..11652 FT /gene="MICA" FT /allele="MICA*001:new" FT /number=6 XX SQ Sequence 11652 BP; 2381 A; 2972 C; 2806 G; 3493 T; 0 other; gggtggcgac gtcggggcca tggggctggg cccggtcttc ctgcttctgg ctggcatctt 60 cccttttgca cctccgggag ctgctgctgg tgagtggcgt tcctggcggt cctcggcgga 120 gcgggagcag tgggacgttt ccgggggtcg ggtgggtagc ggcgagcgct gtgcggtcag 180 ggcggggctc ctgtgccctg tcggtggcgc agggagctgg acgcggcccg ttaccgccac 240 acttcagccc tgcttccccg tcacttttca gtcctcctcg ggatcgcgca tcacctgcac 300 tttctggtct cctcctgctc tttctctcct cgcgtctcct ccgcttcctc tcacttttcg 360 gacaaaccag tccttctgag gcccatgggt tcccgggctg cctccggggc tgctcctgtg 420 aatggcattc gagtgccctt ccagcgcggc cactgaagca gccacaaccc ccggtgctcg 480 gggcggctct caggtccctg aagtcctgtc ctctcccgga gccgacgtgt tctcagctcc 540 tgggccgcag ctcctggagt aggggccctc ctttctcggg acccggagct ggtgcttcct 600 gctgctgtgg ggactgtggg gggtcctgac tctcaagctg aggggttgga gtctgcaggc 660 tccgggcaga ggattcttcc tgcgacttct ctcatcccca gctcattctc ccctcgcctc 720 tggctccgag ggtcctctcc tctctctcat cccaccccta ctaatgacca gtgatctaag 780 gacaccagat tccctctcac ctcctccctg cccatctcag ggcccgctga gtccttttgc 840 cctcccagct ccctgctacc ccttcctgtg tgctgttctc tgatccattt ctagggtgtc 900 ctctgccctc atcccctgtc cccgccaccg aaggtccctc ctgcacccct tatgggcctt 960 tcctacaagc agccttcacc cagtgctgcc cctatgcctc cccgttccca aatgtccctg 1020 actctaactt tctggtgctg ccttttatcc gggggggtct tccctccatc ccactcccct 1080 ccagaccccc aaggggaacc ctgatgctaa tggcagttgg gccttaggca gggcgcaggg 1140 cagcgcagat gccccctccc ctccagtgca gatgcctgct ctggaccctg cctcattgtg 1200 gccccttccc cactccttca tcctcagcct caccctcttg aggaccccac cctccagccc 1260 acaggtgctg gaccatccct ccctggtccc tccgcccctc tccaccttgg gaccttgtgc 1320 tgctcctatc tcttgcccag ctgccttggg ccctcagcac gttctcatct ttcagtggga 1380 aagtgggagt gctggagcat atgacagtgc tgagcatctt tcccaagccc caccctcccc 1440 cagagcaccc tcccctcctg tcctcaccct accccaagtt ctcccacagt cactcctgcc 1500 ccatgctcat gccgccctcc agttcttgct ctgcccatct cccctcccca acccagacct 1560 aaaacaggct gttgggccaa ctgttccttg accttccttc ttttcttttg gttccttgac 1620 cccagtgggc tctcactccc cacaccgcat atctaaaatc tgttttgcct gctcttgggg 1680 tgccactgct ccccctccag cattactcct tttggcaggt ccttcctcag gctgagaatc 1740 tccccctcta ccttggtttt ctctctctgg ccagcacccc caccccttgc tttgttttta 1800 atttttaact tttgtttggg tacgtagtag atatatatgt atatatttat ggggtacatg 1860 ggatattttc acacaggcct acaatatgta ataatcacat cagggtaaat gggttatatc 1920 acaacaagca tttatccttt ctttgtgcta caaacaatcc cattatgctc tttcagttat 1980 ttttaaatgt acaataaatt attgttgact gtactcaccc tgctgtgcta tctactagat 2040 cttattcatt ctaattatat ttttgtaccc attattaacc atccctgctc ccccactccc 2100 cactaccctt ctcagcctct ggtaatcatc attctattgt ctctccccat gaggtccatt 2160 gttttaaatt ttggctgcca caaataagtg agaacatgca aagtttgtct gtctgggcct 2220 ggggcttatt tcacttcaca ggatgacctc cagttctttg caaatgacac gatggctgaa 2280 tagttctcca catacacatg tacaccacat tttctttatc catgcgtctg ttgatggaca 2340 cttagattgc ttgcagatct tggctacttt gaatagtgct gcaataaaca tggaaaagta 2400 gatagctctt taatataccg atttcctttc tttggagtat atgcctaaca gtgggagtgc 2460 tggagcatat gacagctcta ttgtattttt agtttttgga agaacctcca cattgtttcc 2520 catagtggtt gtactagttt acgttcccac caacagtgta catcctcacc agcattcctt 2580 atttctacat cctcgccagc attccttatt gcctgtcttc tggataaaag ccagtttatc 2640 tggggtggga tgttatctcg taggagtttt gatttgcctt catctgttga cgaatgatgt 2700 tgagcacctt ttcatatacc tgtttgccat ttatatgtct tcttttgaga aatgactatt 2760 cagatctttt ctcattttta aattggatta ttatattttt ttttcctata gttgttcgag 2820 ctccttatat gtttcagtta ctgatccttt gtcagatgaa tagtttgaaa atattttctc 2880 ccattcttgg atggtctctt cattttgttt attgtttcct ttgctgtgca gaagcctttt 2940 tacttgatat gatcccattt atgcaatttt actttggtta cctgtgcttg tggggtatta 3000 ctttaaaaat ctttgcccag tccaatatcc tagagagttt ccccaatgtt ttcttgtata 3060 gtttcatagt ttgaggtcat agatttacat ctttaatcca ctttgatttg atttttgtat 3120 atggtgaaag acagggtcta gtttcattct tctgcataag gatatctagt ttccccagca 3180 ccatttttga agagactctc ctttgccaat gtgtgttctt ggtacctttg ttggaaatga 3240 gtttactgta gatgtatgga attgtttctg ggttctctat tctgtttcat tggtctgtgt 3300 gtctgttttt atgccagtat catgctgttt tggttactgt agctctgtag tataatttga 3360 agtcagataa tgtgattcct ctagttttgt tcattttgct caggatagct ttatctattc 3420 tggttttttt gtggttccat atgcatttta ggattatttt tattatttct gtgaagaatg 3480 tcattagtgt tttgataggg attgcattga atctgtagat tactttgggt agtatggata 3540 tttcaacaaa actgattctt ccaatccatg aacgtggact atcttttcca ttttttgtgt 3600 ccttcaattt tttgcatcag tgttttttgt ttttggtttt tgagatggag tttcactctt 3660 gttgcccagg ctagaatgca agggtgtgat cttggctcac cgcaacctcc gcctcccagg 3720 ttcaagcgat tcttctgcct cagcctccca agtagctggg attacaggca tgtgccactg 3780 tgcctggcta attttctatt tttattagag atggggtttc tctatgttgg ccaggctagt 3840 cttgaactcc tgacctcagg tgatccacct gcctcggcct cccaaagtgc tgggattaca 3900 ggcatgagcc accacgccca gccacatcac tgttttatag tttttattgg agaggtcttt 3960 cacttcttca gttaggttta ttcctcagta ttttatttta tttgtagcta ttgtaaatgg 4020 gattcgtttc ttgatttctt tttcagatta tttgctgtta gcactgattt ttgcatgttg 4080 attttgtatc ctgcaacttt actgaatttg ttcttcagtt ctaatggttt tttggtggag 4140 tctttaggtt tttccaaata tcagaccaca tgatctgcaa acaaggataa tttgacttct 4200 tcttttccag ttttaatgcc ctttctttct ttctcctgtc tgattgctct agttaggatc 4260 tgcagtactg tgttgcataa ctgtggtaaa attagtcatc cttgtcttat tccagatctt 4320 agagaaaagg ctttcagttt tcccccattc agtatgttac tagctgtgag tttgtcatat 4380 atggctttta ttatattgag gtctgttcct tgtatactta gttttttgag agtttttatc 4440 atgaagggat gttgaattta tcaaatgctt tttcagtatc aattgaatga tactggcttt 4500 tgtcctttat tctgttgata tgacgtatta cattgattga tttgtgtatg ttaaatcatc 4560 cttgcatacc tggaatacat tccacttgct cataaagaat gatctttttt aatgtattgt 4620 tgaatgtggt ttgctagtat ttccttgacg atttttgcat cagtgttcat cagggatata 4680 ggcctgtagt tttctttttt atgatgtgtc tttgcctggt ttttgtatca ggatattcct 4740 ggctttgtaa aatgagtttg gaagtattcc ctcctcctct atttttcaga acagtttgaa 4800 taggactgac atatgttgtt ctttaaaagt ttaattgtgg taaattatac attacataaa 4860 ttttactgtt ttaaccactt ttaagtgtat actcggtggc attagataca ttcacatttt 4920 tgtgcaaccc aaaactctgt gcccattaat cggtaactcc ccattcctac ctacctctgg 4980 cccctggtaa ccaccattct actttttgtt tctatgaatt tgaccactct aggtacctca 5040 tttaagcaga atcatgtaat gtttgtcttt ttgtttctgg cttatttcac ttataatatt 5100 tttgaggttc ggtgggcaca gtggctcacg cctggatttc cagcactttg ggaggttgaa 5160 gcaggtggat cacctgagtt tcggagttcg aaaccagcct ggccagcctg gccaacatgg 5220 tgaaacccca tctctactaa aaataataaa agttagccgg gcgtgatggc gggtgcctgt 5280 aatcccaact acttggaagg ctgaggcagg agaatcgctt gaatccggga agtggaggtt 5340 gcagtgagct gagatcaggc cactgcactc cagcctgggc aacaagagtg aaattccatc 5400 tccaaaaaaa aaataaaaca ataataataa taatattttt gaggttcatc caagttgtag 5460 tatgggtcag aatttcattc cttttaagga tggataatac tcattatatg tatgtaccac 5520 atcttggtta tccatccctc agacaacgga cacttgggtt acttctacct tttggatatt 5580 ggcaaatatt tcatttcctt tgggtatata tttatttcct ttgggtattt cttttgggta 5640 tatatccaga aatagaagca gtacacaggg gcttcatttt ctctgtctct ttgccaacct 5700 tgctctgtgt gtgtgtgtgt gtgtgtgtgt gtgtgtgtgt gtgtgtgtag gtgtgtgata 5760 acagccatcc tgattggttt caggtggcat ctcattgtgg tttggatttc cattttccta 5820 atgagtgctg atattgagca tcttttcatg tgtttgttga tcatttgtaa ttttctttga 5880 agaattggcc atttaagtct tttgcccatt ttttccccca catagcttct catggctact 5940 ttgcccattt tttagtgggt tgactgtttt tgttgttttt gtcagacttt tttatatatt 6000 ctggaaacta atctcttatc agatatatga cttgcaatat ttatttcatt tcggggttga 6060 ttgctttttc actctgattg tgtcctttga tgcatagatg ttttgaattt tcatcagtct 6120 actttgtcag ttctttctat tctatctgtg ctttggtgtc atatccatga aagcactgtc 6180 aaatcctatg tcatgaacat tatccccaat gtttgcttct aagaaatttt taggttttag 6240 ttcttgagtg tagagtttag gtctttgatt cattttgaat taatttttgt atatagtgca 6300 aattaagggt ccaattttat tttaacaccc cctgccccca gaactatttg ctgaaaagat 6360 cagctgactc tttgtcacct gctcacccca gtggacacta gctgttccat ccaattgctg 6420 tcctggggcc ttgtcatgcc actcttccac tttgaaccca agcccacacc gttgctcccc 6480 tctgggatac tgaccccact ataaacttct ctggggctac aaccttccta ccctttgtgc 6540 ctcatgacca ccccctccct tgtccccacc atgcccatga tgagtctctt ctcgaggcag 6600 ctccccttgc ctccatctca ccctcacctg tgcaccacag ccacactgga catgggtccc 6660 tctgagcctg agtcccttcc cattcccacc atcccctctg gcaagacctt ccttccacca 6720 ccttcatgct cctccctcgc ccctgcaggg cagcctctcc ccttggcccc tattccctta 6780 gggggcttgt ggccacccag tccttgcacc tggcctacaa gtttgccatc ttcattcccc 6840 cttcttctgt tcatcagccc cctcctctat cctcccaccc tcacagtttt ctttgtatat 6900 gaaatcctcg ttcttgtccc tttgcctgtg tgcatttcct gcctcctcag gaaggttggg 6960 acagcagacc tgtgtgttaa acatcaatgt gaagttattt ccaggaagaa gtttcacctg 7020 tgatttcctc ttccccagag ccccacagtc ttcgttataa cctcacggtg ctgtcctggg 7080 atggatctgt gcagtcaggg tttctcactg aggtacatct ggatggtcag cccttcctgc 7140 gctgtgacag gcagaaatgc agggcaaagc cccagggaca gtgggcagaa gatgtcctgg 7200 gaaataagac atgggacaga gagaccagag acttgacagg gaacggaaag gacctcagga 7260 tgaccctggc tcatatcaag gaccagaaag aaggtgagag tcggcagggg caagagtgac 7320 tggagaggcc ttttccagaa aagttagggg cagagagcag ggacctgtct cttcccactg 7380 gatctggctc aggctggggg tgaggaatgg gggtcagtgg aactcagcag ggtggtgagc 7440 cggcactcag cccacacagg gaggcatgga ggagggccag ggaggcgtac cccctgggct 7500 gagttcctca cttgggtgga aaggtgatgg gttcgggaat ggagaagtca ctgctgggtg 7560 ggggcaggct tgcattccct ccaggagatt agggtctgtg agatccatga agacaacagc 7620 accaggagct cccagcattt ctactacgat ggggagctct tcctctccca aaacctggag 7680 actgaggaat ggacaatgcc ccagtcctcc agagctcaga ccttggccat gaacgtcagg 7740 aatttcttga aggaagatgc catgaagacc aagacactct atcacgctat gcatgcagac 7800 tgcctgcagg aactacggcg atatctaaaa tccggcgtag tcctgaggag aacaggtacc 7860 gacgctggcc aggggctctc ctctccctcc aattctgcta gagttgcctc acctcccaga 7920 tgtgtccagg gaaaccctcc ctgtgctatg gatgaaggca tttcctgttg gcacatcgtg 7980 tcctgatttt cctctattgt tagagccact ggataaagac agtgggtcag ggactggacc 8040 atccagtgtt gtaatcaggg caagtagagg accctccgac agaatcctga gcctggggtg 8100 ggtgtcaggc aggagaggaa ggcttcaggg ccagggctgc cccctctgcc tcccagcctg 8160 cccatcctgg agagttccct cctggcccca caacccagga gtccacccct gacatccccc 8220 tcctcagcat caatgtgggg atcccagagc ctgaggccac agtcccatgg cccatcctcc 8280 tgccagcctg gaagaactgg gccccagagt gaggacagac ttgcaggtca ggggtcccag 8340 agggcttcag ccagagtgag aacagtgaag agaaacagcc ctgttcctct cccctcctta 8400 gaggggagca gggcttcact ggctctgccc tttcttctcc agtgcccccc atggtgaatg 8460 tcacccgcag cgaggcctca gagggcaaca ttaccgtgac atgcagggct tctggcttct 8520 atccctggaa tatcacactg agctggcgtc aggatggggt atctttgagc cacgacaccc 8580 agcagtgggg ggatgtcctg cctgatggga atggaaccta ccagacctgg gtggccacca 8640 ggatttgcca aggagaggag cagaggttca cctgctacat ggaacacagc gggaatcaca 8700 gcactcaccc tgtgccctct ggtgagccta gggtgaccct ggagagggtc aggccagggt 8760 agggacagca gggatggctg tggctctctg cccagtgtat aacaagtccc ttttttttca 8820 gggaaagtgc tggtgcttca gagtcattgg cagacattcc atgtttctgc tgttgctgct 8880 gctgctattt ttgttattat tattttctat gtccgttgtt gtaagaagaa aacatcagct 8940 gcagagggtc caggtgagaa aagcgggcag tttctggaga tggtaaggcc cctgtctggg 9000 cagtagggtc ccctcattgc tcctgcaaag ataggcatgt tggtgacaag gcttctgtaa 9060 caggggatga aagttgggga atttgggaag ggaatggggg cagcatctcc atctacacct 9120 ataagtgctg cccaagcgag ggtcaaacgc ccagctgtgg catcttcctg ctgcaggtga 9180 ggagtgggca gcagggaggg ctgcggcgcc tgctctgtcc ccatcccggt ctctgtgtct 9240 cttggactca ctagggcgca tccaggtggg gtgagctggg aatcacgtgc tgaatgctga 9300 ggacctggat gatcacggcc tcagagggag caaatagtaa aggcagctgt gatctgggga 9360 gggccagaaa ctggagagga atctgaggag aggcggtgcc cctattccct tcctctctgc 9420 atccctctcc cctgtttctc cagccatcgg ggcggacacc gagaaaaaga cctatgaggc 9480 ccagcctggg ggccctgcct gtttagccct ttggagaccc cttgtaacag ggagggtcct 9540 gagcacacat ggccatctct gtccactttt cagctcccca tgcacctcct ccaggagctt 9600 tcttggggtt gtcgtgtcct ctgcaccatt cgaggcccta ctctttccag gttcccacag 9660 cctggcctcc ctgagtttct tgcagatgag atggatgagt agataagcag atgtccctgg 9720 gccatttgag gagtggggcc cagcccctca tcagggcagc tgtggtccct gttttcatcc 9780 tacctccgag tgttttcttc tccagtccct gagggacaca gtcctcaggg cccatgtttt 9840 tggggcttta atctgtgctc tgtggcctca ccttgccctc cctgagccaa tttccctttc 9900 taaaggtggt cactgcctgg taagtttgga gtaagggacg gtcagaatca tttcccctac 9960 agtcaggttg tttgatgggg gatgaaaaga gacagcagga agttttgtgt ttctgcaaag 10020 acagaagcag ttcaggggac agtaagaggc tggggtgtcc aggagggtgt gtctggcagt 10080 agggtcgctg gtttctcatc cttgaaccta attgcactgt cagtcggccc ctcaggcctg 10140 agcagatggg aaggtttgtc ccctgccctg cagtaagagg gccctgtcca ggaggcaccc 10200 acaacagggg cagtgcaggt ctgtggtcgc tcctgctctc acctgtggtg tctcccgtag 10260 agggattatc agttctggtt ccctgtgggc aggaatggtt tcctcatagg tcactggagt 10320 tttggccagg aaaagagtat gaagttcatg tgccagtttc tcaaaattcc tgctttcaat 10380 gttgatgtca agcaaagata ttcgtaattt cagctctata atcttaatag gatttcctct 10440 aatattgtaa agcatcttat atgaaacagg aacacaaatt tctcaaaatt cctgcgatgt 10500 ccaataaaga ttttcataat ttcggctctc caatcttaat aggatttcct aatactgtaa 10560 agcatattaa atgaaacagg aactcaaatt tggagccccc tctccaggag gttctgtgtg 10620 gagatggtgg ctgtggcagt ggcagttccc aggtgcagag ggtgggcaga ggcagcctca 10680 ggctaagggg tctcccctac tccacatgga gaaaatccct tgtaggttgc aagggcagtg 10740 gccgggtgga atccctgcta gggacagagc aggaaggcct cgcagcctca ccaagcagca 10800 gccctggggt ggagctgcgt ttccagggtt aagcggacca ggcaggagca gtggttactc 10860 aacagcaggt cacaggcttg ggttgtgagg gtcaggagag gccaggcctc ctcgagcaag 10920 gtgggggtcc cagggtcagg tcaggtgcag atcctgtggc agccacgtct ttccatgctg 10980 ggcctgctgg gccccccagg ctttctgatg gggtccccag ttaggagctg cctgctcagg 11040 gctgggaggg gaggagcgct gagctgcaga tagagggcag agcccacagt gggcagggcc 11100 tgccctggtg tgtaggtgcc tctgcaggag aggagggcct ggggactgag agcaagggtc 11160 agggcctctc tttgaggagg cctctcactg taacaggact ggtcaggcct gagaggaggt 11220 cactgggttc cctcttgggt cttgtccttt agtcttgggg ccctttccct ccctgcacga 11280 tgagtggtgg gcacagggca ggggctgatg ttgatggagt gatgggaggg aactggtagg 11340 ggctgggaaa agcaaggagg gaggaagaaa aaagtggggg cctcatcttc cctcagagaa 11400 agggcgaatc tggttttgga gcaactgaag agagaaaagt ccccagggaa taaacacaac 11460 actgcaccca gtggagcatt tacccgtttc cctcttttct ccagagctcg tgagcctgca 11520 ggtcctggat caacacccag ttgggacgag tgaccacagg gatgccacac agctcggatt 11580 tcagcctctg atgtcagatc ttgggtccac tggctccact gagggcgcct agactctaca 11640 gccaggcagc tg 11652 //