Dbfetch
ID LR595826; SV 1; linear; genomic DNA; STD; HUM; 11544 BP. XX AC LR595826; XX PR Project:PRJEB32777; XX DT 23-JUL-2020 (Rel. 144, Created) DT 23-JUL-2020 (Rel. 144, Last updated, Version 1) XX DE Homo sapiens, MICA gene for MHC Class I chain-related gene, cell line DE DKMS-LSL_ID15556535_MICA_2, allele MICA*019:new XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RA Albrecht V., Schmidt H. A., Klussmeier A., Lange V., Putke K.; RT ; RL Submitted (05-JUN-2019) to the INSDC. RL DKMS LIFE SCIENCE LAB, Research & Development, St. Petersburger Str. 2, RL Saxony, 01069 Dresden, Germany XX DR MD5; e0d21d902ccaf9924e1fb2dbea5067c3. XX FH Key Location/Qualifiers FH FT source 1..11544 FT /organism="Homo sapiens" FT /mol_type="genomic DNA" FT /cell_line="DKMS-LSL_ID15556535_MICA_2" FT /db_xref="taxon:9606" FT exon 1..89 FT /gene="MICA" FT /allele="MICA*019:new" FT /number=1 FT CDS join(20..89,6929..7183,7458..7745,8333..8611,8711..8845, FT 11397..11524) FT /codon_start=1 FT /transl_table=1 FT /gene="MICA" FT /allele="MICA*019:new" FT /product="MHC Class I chain-related gene" FT /function="antigen presenting molecule" FT /protein_id="VTZ97956.1" FT /translation="MGLGPVFLLLAGIFPFAPPGAAAEPHSLRYNLTVLSWDGSVQSGF FT LAEVHLDGQPFLRYDRQKCRAKPQGQWAEDVLGNKTWDRETRDLTGNGKDLRMTLAHIK FT DQKEGLHSLQEIRVCEIHEDNSTRSSQHFYYDGELFLSQNLETEEWTVPQSSRAQTLAM FT NVRNFLKEDAMKTKTHYHAMHADCLQELRRYLESSVVLRRTVPPMVNVTRSEASEGNIT FT VTCRASSFYPRNIILTWRQDGVSLSHDTQQWGDVLPDGNGTYQTWVATRICRGEEQRFT FT CYMEHSGNHSTHPVPSGKVLVLQSHWQTFHVSAVAAAAAIFVIIIFYVRCCKKKTSAAE FT GPELVSLQVLDQHPVGTSDHRDATQLGFQPLMSALGSTGSTEGA" FT intron 90..6928 FT /gene="MICA" FT /allele="MICA*019:new" FT /number=1 FT exon 6929..7183 FT /gene="MICA" FT /allele="MICA*019:new" FT /number=2 FT intron 7184..7457 FT /gene="MICA" FT /allele="MICA*019:new" FT /number=2 FT exon 7458..7745 FT /gene="MICA" FT /allele="MICA*019:new" FT /number=3 FT intron 7746..8332 FT /gene="MICA" FT /allele="MICA*019:new" FT /number=3 FT exon 8333..8611 FT /gene="MICA" FT /allele="MICA*019:new" FT /number=4 FT intron 8612..8710 FT /gene="MICA" FT /allele="MICA*019:new" FT /number=4 FT exon 8711..8845 FT /gene="MICA" FT /allele="MICA*019:new" FT /number=5 FT intron 8846..11396 FT /gene="MICA" FT /allele="MICA*019:new" FT /number=5 FT exon 11397..11544 FT /gene="MICA" FT /allele="MICA*019:new" FT /number=6 XX SQ Sequence 11544 BP; 2372 A; 2966 C; 2780 G; 3426 T; 0 other; gggtggcgac gtcggggcca tggggctggg cccggtcttc ctgcttctgg ctggcatctt 60 cccttttgca cctccgggag ctgctgctgg tgagtggcgt tcctggcggt cctcggcgga 120 gcgggagcag tgggacgttt ccgggggtcg ggtgggtagc ggcgagcgct gtgcggtcag 180 ggcggggctc ctgtgccctg tcggtggcgc agggagctgg acgcggcccg ttaccgccac 240 acttcagccc tgcttccccg tcacttttca gtcctcctcg ggatcgcgca tcacctgcac 300 tttctggtct cctcctgctc tttctctcct cgcgtctcct ccgcttcctc tcacttttcg 360 gacaaaccag tccttctgag gcccatgggt tcccgggctg cctccggggc tgctcctgtg 420 aatggcattc gagtgccctt ccagcgcggc cactgaagca gccacaaccc ccggtgctcg 480 gggcggctct caggtccctg aagtcctgtc ctctcccgga gccgacgtgt tctcagctcc 540 tgggccgcag ctcctggagt aggggccctc ctttctcggg acccggagct ggtgcttcct 600 gctgctgtgg ggactgtggg gggtcctgac tctcaagctg aggggttgga gtctgcaggc 660 tccgggcaga ggattcttcc tgcgacttct ctcatcccca gctcattctc ccctcgcctc 720 tggctccgag ggtcctctcc tctctctcat cccaccccta ctaatgacca gtgatctaag 780 gacaccagat tccctctcac ctcctccctg cccatctcag ggcccgctga gtccttttgc 840 cctcccagct ccctgctacc ccttcctgtg tgctgttctc tgatccattt ctagggtgtc 900 ctctgccctc atcccctgtc cccgccaccg aaggtccctc ctgcacccct tatgggcctt 960 tcctacaagc agccttcacc cagtgctgcc cctatgcctc cccgttccca aatgtccctg 1020 actctaactt tctggtgctg ccttttatcc gggggggtct tccctccatc ccactcccct 1080 ccagaccccc aaggggaacc ctgatgctaa tggcagttgg gccttaggca gggcgcaggg 1140 cagcgcagat gccccctccc ctccagtgca gatgcctgtt ctggaccctg cctcattgtg 1200 gccccttccc cactccttca tcctcagcct caccctcttg aggaccccac cctccagccc 1260 acaggtgctg gaccatccct ccctggtccc tccgcccctc tccaccttgg gaccttgtgc 1320 tgctcctatc tcttgcccag ctgccttggg ccctcagcac gttctcatct ttcagtggga 1380 aagtgggagt gctggagcat atgacagtgc tgagcatctt tcccaagccc caccctcccc 1440 cagagcaccc tcccctcctg tcctcaccct accccaagtt ctcccacagt cactcctgcc 1500 ccatgctcat gccgccctcc agttcttgct ctgcccatct cccctcccca acccagacct 1560 aaaacaggct gttgggccaa ctgttccttg accttccttc ttttcttttg gttccttgac 1620 cccagtgggc tctcactccc cacaccgcat atctaaaatc tgttttgcct gctcttgggg 1680 tgccactgct ccccctccag cattactcct tttggcaggt ccttcctcag gctgagaatc 1740 tccccctcta ccttggtttt ctctctctgg ccagcacccc cactccttgc tttgttttta 1800 atttttaact tttgtttggg tacgtagtag atatatatgt atatatttat ggggtacatg 1860 ggatattttg acacaggcct acaatatgta ataatcacat cagggtaaat gggttatatc 1920 acaacaagca tttatccttt ctttgtgcta caaacaatcc cattatgctc tttcagttat 1980 ttttaaatgt acaataaatt attgttgact gtactcaccc tgctgtgcta tctactagat 2040 cttattcatt ctaattatat ttttgtaccc attattaacc atccctgctc ccccactccc 2100 cactaccctt ctcagcctct ggtaatcatc attctattgt ctctccccat gaggtccatt 2160 gttttaaatt ttggctgcca caaataagtg agaacatgca aagtttgtct gtctgggcct 2220 ggggcttatt tcacttcaca ggatgacctc cagttctttg caaatgacac gatggctgaa 2280 tagttctcca catacacatg tacaccacat tttctttatc catgcgtctg ttgatggaca 2340 cttagattgc ttgcagatct tggctacttt gaatagtgct gcaataaaca tggaaaagta 2400 gatagctctt taatataccg atttcctttc tttggagtat atgcctaaca gtgggagtgc 2460 tggagcatat gacagctcta ttgtattttt agtttttgga agaacctcca cattgtttcc 2520 catagtggtt gtactagttt acgttcccac caacagtgta catcctcacc agcattcctt 2580 atttctacat cctcgccagc attccttatt gcctgtcttc tggataaaag ccagtttatc 2640 tggggtggga tgttatctcg taggagtttt gatttgcctt catctgttga cgaatgatgt 2700 tgagcacctt ttcatatacc tgtttgccat ttatatgtct tcttttgaga aatgactatt 2760 cagatctttt ctcattttta aattggatta ttatattttt tttcctatag ttgttcgagc 2820 tccttatatg tttcagttac tgatcctttg tcagatgaat agtttgaaaa tattttctcc 2880 cattcttgga tggtctcttc attttgttta ttgtttcctt tgctgtgcag aagccttttt 2940 acttgatatg atcccattta tgcaatttta ctttggttac ctgtgcttgt ggggtattac 3000 tttaaaaatc tttgcccagt ccaatatcct agagagtttc cccaatgttt tcttgtatag 3060 tttcatagtt tgaggtcata gatttacatc tttaatccac tttgatttga tttttgtata 3120 tggtgaaaga cagggtctag tttcattctt ctgcataagg atatctagtt tccccagcac 3180 catttttgaa gagactctcc tttgccaatg tgtgttcttg gtacctttgt tggaaatgag 3240 tttactgtag atgtatggaa ttgtttctgg gttctctatt ctgtttcatt ggtctgtgtg 3300 tctgttttta tgccagtatc atgctgtttt ggttactgta gctctgtagt ataatttgaa 3360 gtcagataat gtgattcctc tagttttgtt cattttgctc aggatagctt tatctattct 3420 ggtttttttg tggttccata tgcattttag gattattttt attatttctg tgaagaatgt 3480 cattagtgtt ttgataggga ttgcattgaa tctgtagatt actttgagta gtatggatat 3540 ttcaacaaaa ctgattcttc caatccatga acgtggacta tcttttccat tttttgtgtc 3600 cttcaatttt ttgcatcagt gttttttgtt tttggttttt gagatggagt ttcactcttg 3660 ttgcccaggc tagaatgcaa gggtgtgatc ttggctcacc gcaacctccg cctcccaggt 3720 tcaagctatt cttctgcctc agcctcccaa gtagctggga ttacaggcat gtgccactgt 3780 gcctggctaa ttttctattt ttattagaga tggggtttct ctatgttggc caggctagtc 3840 ttgaactcct gacctcaggt gatccacctg cctcggcctc ccaaagtgct gggattacag 3900 gcatgagcca ccacgcccag ccacatcact gttttatagt ttttattgga gaggtctttc 3960 acttcttcag ttaggtttat tcctcagtat tttattttat ttgtagctat tgtaaatggg 4020 attcgtttct tgatttcttt ttcagattat ttgctgttag cactgatttt tgcatgttga 4080 ttttgtatcc tgcaacttta ctgaatttgt tcttcagttc taatggtttt ttggtggagt 4140 ctttaggttt ttccaaatat cagaccacat gatctgcaaa caaggataat ttgacttctt 4200 cttttccagt tttaatgccc tttctttctt tctcctgtct gattgctcta gttaggatct 4260 gcagtactgt gttgcataac tgtggtaaaa ttagtcatcc ttgtcttatt ccagatctta 4320 gagaaaaggc tttcagtttt cccccattca gtatgttact agctgtgagt ttgtcatata 4380 tggcttttat tatattgagg tctgttcctt gtatacttag ttttttgaga gtttttatca 4440 tgaagggatg ttgaatttat caaatgcttt ttcagtatca attgaatgat actggctttt 4500 gtcctttatt ctgttgatat gacgtattac attgattgat ttgtgtatgt taaatcatcc 4560 ttgcatacct ggaatacatt ccacttgctc ataaagaatg atctttttta atgtattgtt 4620 gaatgtggtt tgctagtatt tccttgacga tttttgcatc ggtgttcatc agggatatag 4680 gcctgtagtt ttctttttta tgatgtgtct ttgcctggtt tttgtatcag gatattcctg 4740 gctttgtaaa atgagtttgg aagtattccc tcctcctcta tttttcagaa cagtttgaat 4800 aggactgaca tatgttgttc tttaaaagtt taattgtggt aaattataca ttacataaat 4860 tttactgttt taaccacttt taagtgtata ctcggtggca ttagatacat tcacattttt 4920 gtgcaaccca aaactctgtg cccattaatc ggtaactccc cattcctccc tacctctggc 4980 ccctggtaac caccattcta ctttttgttt ctatgaattt gaccactcta ggtacctcat 5040 ttaagcagaa tcatgtaatg tttgtctttt tgtttctggc ttatttcact tataatattt 5100 ttgaggttcg gtgggcacag tggctcacgc ctggatttcc agcactttgg gaggctgaag 5160 caggtggatc acctgagttt cggagttcga aaccagcctg gccaacatgg tgaaacccca 5220 tctctactaa aaataataaa agttagccgg gcgtgatggc gggtgcctgt aatcccaact 5280 acttgggagg ctgaggcagg agaatcgctt gaatccggga agtggaggtt gcagtgagct 5340 gagatcaggc cactgcactc cagcctgggc aacaagagtg aaattccatc tccaaaaaaa 5400 aaaaataaaa caataataat aataatattt ttgaggttca tccaagttgt agtatgggtc 5460 agaatttcat tccttttaag gatggataat actcattata tgtatgtacc acatcttggt 5520 tatccatccc tcagacaatg gacacttggg ttacttctac cttttggata ttggcaaata 5580 tttcatttcc tttgggtata tatttatttc ctttgggtat ttcttttggg tatatatcca 5640 gaaatagaag cagtacacag gggcttcatt ttctctgtct ctttgccaac cttgctctgt 5700 gtgtgtgtgt gtatgtgtgt gtgtaggtgt gtgataacag ccatcctgat tggtttcagg 5760 tggcatctca ttgtggtttg gatttgcatt ttcctaatga gtgctgatat tgagcatctt 5820 ttcatgtgtt tgttgatcat ttgtaatttt ctttgaagaa ttggccattt aagtcttttg 5880 cccatttttt cccccacata gcttctctta tcagatatat gacttgcaat atttatttca 5940 tttcggggtt gattgctttt tcactctgat tgtgcccttt gatgcataga tgttttgaat 6000 tttcatcagt ctactttgtc agttctttct attctatctg tgctttggtg tcatatccat 6060 gaaagcactg tcaaatccta tgtcatgaac attatcccca atgtttgctt ctaagaaatt 6120 tttaggtttt agttcttgag tgtagagttt aggtctttga ttcattttga gttaattttt 6180 gtatatagta caaattaaga gtccaatttt attttaacac cccctgcccc cagaactatt 6240 tgctgaaaag atcaactgac tctttgtcac ctgctcaccc cagtggacac tagctgttcc 6300 atccaattgc tgtcctgggg ccttgtcatg ccactcttcc actttgaacc caagcccaca 6360 ccgttgctcc cctctgggat actgacccca ctataaactt cactggggct acaaccttcc 6420 taccccttgt gcctcatgac caccccctcc cttgtcccca ccatgcccat gatgagtctc 6480 ttctcgaggc agctcccctt gcctccatct caccctcagc ctatgcacca cagccacact 6540 ggacatgggt ccctctgagc ctgagtccct tcccattccc accgtcccct ctggcaagac 6600 cttccttcca ccaccttcat gctcctccct cgcccctgca gggcagcctc tccccttggc 6660 ccctattccc ttagggggct tgtggccacc cagtccttgc acctggccta caagtttgcc 6720 atcttcattc ccccttcttc tgttcatcag ccccctcctc tatcctccca ccctcacagt 6780 tttctttgta tatgaaatcc tcgttcttgt ccctttgccc gtgtgcattt cctgccccag 6840 gaaggttggg acagcagacc tgtgtgttaa acatcaatgt gaagttactt ccaggaagaa 6900 gtttcacctg tgatttcctc ttccccagag ccccacagtc ttcgttataa cctcacggtg 6960 ctgtcctggg atggatctgt gcagtcaggg tttcttgctg aggtacatct ggatggtcag 7020 cccttcctgc gctatgacag gcagaaatgc agggcaaagc cccagggaca gtgggcagaa 7080 gatgtcctgg gaaataagac atgggacaga gagaccaggg acttgacagg gaacggaaag 7140 gacctcagga tgaccctggc tcatatcaag gaccagaaag aaggtgagag tcggcagggg 7200 caagagtgac tggagaggcc ttttccagaa aagttagggg cagagagcag ggacctgtct 7260 cttcccactg gatctggctc aggctggggg tgaggaatgg gggtcagtgg aactcagcag 7320 ggaggtgagc cggcactcag cccacacagg gaggcatgga ggagggccag ggaggcgtac 7380 cccctgggct gagttcctca cttgggtgga aaggtgatgg gttcgggaat ggagaagtca 7440 ctgctgggtg ggggcaggct tgcattccct ccaggagatt agggtctgtg agatccatga 7500 agacaacagc accaggagct cccagcattt ctactacgat ggggagctct tcctctccca 7560 aaacctggag actgaggaat ggacagtgcc ccagtcctcc agagctcaga ccttggccat 7620 gaacgtcagg aatttcttga aggaagatgc catgaagacc aagacacact atcacgctat 7680 gcatgcagac tgcctgcagg aactacggcg atatctagaa tccagcgtag tcctgaggag 7740 aacaggtacc gacgctggcc aggggctctc ctctccctcc aattctgcta gagttgcctc 7800 acctcccaga tgtgtccagg gaaaccctcc ctgtgctatg gatgaaggca tttcctgttg 7860 gcacatcgtg tcctgatttt cctctattgt tagagccact ggataaagac agtgggtcag 7920 ggactggacc atccagtgtt gtaatcaggg caagtagagg accctccgac agaatcctga 7980 gcctgtggtg ggtgtcaggt aggagaggaa gccttcaggg ccagggctgc cccctctgcc 8040 tcccagcctg cccatcctgg agagttccct cctggcccca caacccagga gtccacccct 8100 gacatccccc tcctcagcat caatgtgggg atcccagagc ctgaggccac agtcccaagg 8160 cccatcctcc tgccagcctg gaagaactgg gccccagagt gaggacagac ttgcaggtca 8220 ggggtcccgg agggcttcag ccagagtgag aacagtgaag agaaacagcc ctgttcctct 8280 cccctcctta gaggggagca gggcttcact ggctctgccc tttcttctcc agtgcccccc 8340 atggtgaatg tcacccgcag cgaggcctca gagggcaaca tcaccgtgac atgcagggct 8400 tccagcttct atccccggaa tatcatactg acctggcgtc aggatggggt atctttgagc 8460 cacgacaccc agcagtgggg ggatgtcctg cctgatggga atggaaccta ccagacctgg 8520 gtggccacca ggatttgccg aggagaggag cagaggttca cctgctacat ggaacacagc 8580 gggaatcaca gcactcaccc tgtgccctct ggtgagccta gggtgaccct ggagagggtc 8640 aggccagggt agggacagca gggatggctg tggctctctg cccagtgtat aacaagtccc 8700 tttttttcag ggaaagtgct ggtgcttcag agtcattggc agacattcca tgtttctgct 8760 gttgctgctg ctgctgctat ttttgttatt attattttct atgtccgttg ttgtaagaag 8820 aaaacatcag ctgcagaggg tccaggtgag aaaagcgggc agtttctgga gatggtaagg 8880 cccctgtctg ggcagtaggg tcccctcatt gctcctgcaa agataggcat gttggtgaca 8940 aggcttccgt aacaggggat gaaagttggg gaatttggga agggaatggg ggcagcatct 9000 ccatctacac ccataagtgc tgcccaagcg agggtcaaac gcccagctgt ggcatcctcc 9060 tgctgcaggt gaggagtggg cagcagggag ggctgcggcg cctgctctgt ccccatcccg 9120 gtctctgtgt ctcttggact cactagggcg catccaggtg gggtgagctg ggaatcacgt 9180 gctgaatgct aagggcctgg atgatcacgg cctcagaggg agcaaatagt aaaggcagct 9240 gtgatctggg gagggccaga aactggagag gaatctgagg agaggcggtg cccctattcc 9300 cttcctctct gcatccccct cccctgtttc tccagccatc ggggcggaca ccgagaaaaa 9360 gacctatgag gcccagcctg ggggccctgc ctgtgtagcc ctttggagac cccttgtaac 9420 agggagggtc ctgagcacac atggccatct ctgtccactt tgcagctccc catgcacctc 9480 ctccaggagc tttcttgggg ttgtcgtgtc ctctgcacca ttcgaggccc tactctttcc 9540 aggttcccac ggcctggcct ccctgagttt cttgcagatg acatggatga gtagataagc 9600 agatgtccct gggccatttg aggagtgggg cccagcccct catcagggca gctgtggtcc 9660 ctgttttcat cctacctccg agtgttttct tctccagtcc ctgagggaca cagtcctcag 9720 ggcccatgtt tttggggatt taatctgtgc tctgtggcct caccttgccc tccctgagcc 9780 aatttccctt tctaaaggtg gtcactgcct ggtaagtttg gagtaaggga cggtcagaat 9840 catttcccct acagtcaggt tgtttgatgg gggatgaaaa gagacagcag gaagttttgt 9900 gtttctgcaa agacagaagc agttcaggcg acagtaagag gctggggtgt ccaggaggat 9960 gtgtctggca gtagggtcgc tggtttctca tccttgaacc taattgcact gtcaatcggc 10020 ccctcaggcc tgagcagatg ggaaggtttg tcccctgccc tgcagcaaga gggccctgtc 10080 caggaggcac ccacaacagg ggcagtgcag gtctgtggtc actcctgctc tcacctgtgg 10140 cgtctcccgt agagggattg tcagttctgg ttccctgtgg gcaggaatgg tttcctcata 10200 ggtcactgga gttttggcta ggaaaagagt atgaagttca tgtgccagtt tctcaaaatt 10260 cctgctttca atgttgatgt ccagtaaaga tattcgtaat ttcagctcta taatcttaat 10320 aggatttcct ctaatattgt gaagcatatt atatgaaaca ggaacacaaa tttctcaaaa 10380 ttcctgcgat gtccaataaa gattttcata atttcagctc tgcaatctta ataggatttc 10440 ctaatactgt aaagcatatt aaatgaaaca ggaactcaaa tttggagccc cctctccagg 10500 aggttctgtg tggagatggt ggctgtggca gtggcagttc ccaggtgcag agggtgggca 10560 gaggcagcct caggctaagg ggtctcccct actccacatg gagaaaatcc cttgtaggtt 10620 gcaagggcag tggccgggtg gaatccctgc tagggacaga gcaggaaggc ctcgcagcct 10680 caccaagcag cagccctggg gtggagctgc gtttccaggg ttaagcggac caggcaggag 10740 tagcggttac tcaagagcag gtcacaggct tgggttgtga gggtcaggag aggccaggcc 10800 tcctcgagca aggtgggggt cccagggtca ggtcaggtgc agatcctgtg gcaaccacgt 10860 ctttccatgc tgggcctgct gggcccccca ggcttcctga tggggtcccc agttaggagc 10920 tgcctgctca gggctgggag gggaggagca ctgagctgca gatagagggc agagcccaca 10980 gtgggcaggg cctgccctgg tgtgtaggtg cctctgcagg agaggagggc ctggggactg 11040 agagcaaggg tcagggcctc tctttgggga ggcctctcac tgtaacagga ctggtcaggc 11100 ctgagaggag ggcactgggt tccctcttgg gtcttgtcct ttagtcttgg ggccctttcc 11160 ctccctgcac gatgagtggt gggcacaggg cacgggctga tgttgatgga gtgatgggag 11220 ggaactggca ggggctggga aaagcaagga gggaggaaga aaaaagtggg ggcctcatct 11280 tccctcagag aaagggcaaa tctggttttg gagcaactga agagagaaaa gtccccaggg 11340 aataaacaca acactgcacc cagtggagca tttacccatt tccctctttt ctccagagct 11400 cgtgagcctg caggtcctgg atcaacaccc agttgggacg agtgaccaca gggatgccac 11460 acagctcgga tttcagcctc tgatgtcagc tcttgggtcc actggctcca ctgagggcgc 11520 ctagactcta cagccaggcg gctg 11544 //