Dbfetch
ID LR595764; SV 1; linear; genomic DNA; STD; HUM; 11661 BP. XX AC LR595764; XX PR Project:PRJEB32777; XX DT 23-JUL-2020 (Rel. 144, Created) DT 23-JUL-2020 (Rel. 144, Last updated, Version 1) XX DE Homo sapiens, MICA gene for MHC Class I chain-related gene, cell line DE DKMS-LSL_ID16321353_MICA_1, allele MICA*018:new XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RA Albrecht V., Schmidt H. A., Klussmeier A., Lange V., Putke K.; RT ; RL Submitted (05-JUN-2019) to the INSDC. RL DKMS LIFE SCIENCE LAB, Research & Development, St. Petersburger Str. 2, RL Saxony, 01069 Dresden, Germany XX DR MD5; aac025c50b11529a9516474faad43a0c. XX FH Key Location/Qualifiers FH FT source 1..11661 FT /organism="Homo sapiens" FT /mol_type="genomic DNA" FT /cell_line="DKMS-LSL_ID16321353_MICA_1" FT /db_xref="taxon:9606" FT exon 1..89 FT /gene="MICA" FT /allele="MICA*018:new" FT /number=1 FT CDS join(20..89,7033..7287,7562..7849,8437..8715,8816..8962, FT 11514..11641) FT /codon_start=1 FT /transl_table=1 FT /gene="MICA" FT /allele="MICA*018:new" FT /product="MHC Class I chain-related gene" FT /function="antigen presenting molecule" FT /protein_id="VTZ97894.1" FT /translation="MGLGPVFLLLAGIFPFAPPGAAAEPHSLRYNLTVLSWDGSVQSGF FT LAEVHLDGQPFLRCDRQKCRAKPQGQWAEDVLGNKTWDRETRDLTGNGKDLRMTLAHIK FT DQKEGLHSLQEIRVCEIHEDNSTRSSQHFYYDGELFLSQNLETEEWTMPQSSRAQTLAM FT NVRNFLKEDAMKTKTHYHAMHADCLQELRRYLKSGVVLRRTVPPMVNVTRSEASEGNIT FT VTCRASGFYPWNITLSWRQDGVSLSHDTQQWGDVLPDGNGTYQTWVATRICQGEEQRFT FT CYMEHSGNHSTHPVPSGKVLVLQSHWQTFHVSAVAAAAAAAAAIFVIIIFYVCCCKKKT FT SAAEGPELVSLQVLDQHPVGTSDHRDATQLGFQPLMSDLGSTGSTEGA" FT intron 90..7032 FT /gene="MICA" FT /allele="MICA*018:new" FT /number=1 FT exon 7033..7287 FT /gene="MICA" FT /allele="MICA*018:new" FT /number=2 FT intron 7288..7561 FT /gene="MICA" FT /allele="MICA*018:new" FT /number=2 FT exon 7562..7849 FT /gene="MICA" FT /allele="MICA*018:new" FT /number=3 FT intron 7850..8436 FT /gene="MICA" FT /allele="MICA*018:new" FT /number=3 FT exon 8437..8715 FT /gene="MICA" FT /allele="MICA*018:new" FT /number=4 FT intron 8716..8815 FT /gene="MICA" FT /allele="MICA*018:new" FT /number=4 FT exon 8816..8962 FT /gene="MICA" FT /allele="MICA*018:new" FT /number=5 FT intron 8963..11513 FT /gene="MICA" FT /allele="MICA*018:new" FT /number=5 FT exon 11514..11661 FT /gene="MICA" FT /allele="MICA*018:new" FT /number=6 XX SQ Sequence 11661 BP; 2385 A; 2977 C; 2810 G; 3489 T; 0 other; gggtggcgac gtcggggcca tggggctggg cccggtcttc ctgcttctgg ctggcatctt 60 cccttttgca cctccgggag ctgctgctgg tgagtggcgt tcctggcggt cctcggcgga 120 gcgggagcag tgggacgttt ccgggggtcg ggtgggtagc ggcgagcgct gtgcggtcag 180 ggcggggctc ctgtgccctg tcggtggcgc agggagctgg acgcggcccg ttaccgccac 240 acttcagccc tgcttccccg tcacttttca gtcctcctcg ggatcgcgca tcacctgcac 300 tttctggtct cctcctgctc tttctctcct cgcgtctcct ccgcttcctc tcacttttcg 360 gacaaaccag tccttctgag gcccatgggt tcccgggctg cctccggggc tgctcctgtg 420 aatggcattc gagtgccctt ccagcgcggc cactgaagca gccacaaccc ccggtgctcg 480 gggcggctct caggtccctg aagtcctgtc ctctcccgga gccgacgtgt tctcagctcc 540 tgggccgcag ctcctggagt aggggccctc ctttctcggg acccggagct ggtgcttcct 600 gctgctgtgg ggactgtggg gggtcctgac tctcaagctg aggggttgga gtctgcaggc 660 tccgggcaga ggattcttcc tgcgacttct ctcatcccca gctcattctc ccctcgcctc 720 tggctccgag ggtcctctcc tctctctcat cccaccccta ctaatgacca gtgatctaag 780 gacaccagat tccctctcac ctcctccctg cccatctcag ggcccgctga gtccttttgc 840 cctcccagct ccctgctacc ccttcctgtg tgctgttctc tgatccattt ctagggtgtc 900 ctctgccctc atcccctgtc cccgccaccg aaggtccctc ctgcacccct tatgggcctt 960 tcctacaagc agccttcacc cagtgctgcc cctatgcctc cccgttccca aatgtccctg 1020 actctaactt tctggtgctg ccttttatcc gggggggtct tccctccatc ccactcccct 1080 ccagaccccc aaggggaacc ctgatgctaa tggcagttgg gccttaggca gggcgcaggg 1140 cagcgcagat gccccctccc ctccagtgca gatgcctgct ctggaccctg cctcattgtg 1200 gccccttccc cactccttca tcctcagcct caccctcttg aggaccccac cttccagccc 1260 acaggtgctg gaccatccct ccctggtccc tccgcccctc tccaccttgg gaccttgtgc 1320 tgctcctatc tcttgcccag ctgccttggg ccctcagcac gttctcatct ttcagtggga 1380 aagtgggagt gctggagcat atgacagtgc tgagcatctt tcccaagccc caccctcccc 1440 cagagcaccc tcccctcctg tcctcaccct accccaagtt ctcccacagt cactcctgcc 1500 ccatgctcat gccgccctcc agttcttgct ctgcccatct cccctcccca acccagacct 1560 aaaacaggct gttgggccaa ctgttccttg accttccttc ttttcttttg gttccttgac 1620 cccagtgggc tctcactccc cacaccgcat atctaaaatc tgttttgcct gctcttgggg 1680 tgccactgct ccccctccag cattactcct tttggcaggt ccttcctcag gctgagaatc 1740 tccccctcta ccttggtttt ctctctctgg ccagcacccc caccccttgc tttgttttta 1800 atttttaact tttgtttggg tacgtagtag atatatatgt atatatttat ggggtacatg 1860 ggatattttc acacaggcct acaatatgta ataatcacat cagggtaaat gggttatatc 1920 acaacaagca tttatccttt ctttgtgcta caaacaatcc cattatgctc tttcagttat 1980 ttttaaatgt acaataaatt attgttgact gtactcaccc tgctgtgcta tctactagat 2040 cttattcatt ctaattatat ttttgtaccc attattaacc atccctgctc ccccactccc 2100 cactaccctt ctcagcctct ggtaatcatc attctattgt ctctccccat gaggtccatt 2160 gttttaaatt ttggctgcca caaataagtg agaacatgca aagtttgtct gtctgggcct 2220 ggggcttatt tcacttcaca ggatgacctc cagttctttg caaatgacac gatggctgaa 2280 tagttctcca catacacatg tacaccacat tttctttatc catgcgtctg ttgatggaca 2340 cttagattgc ttgcagatct tggctacttt gaatagtgct gcaataaaca tggaaaagta 2400 gatagctctt taatataccg atttcctttc tttggagtat atgcctaaca gtgggagtgc 2460 tggagcatat gacagctcta ttgtattttt agtttttgga agaacctcca cattgtttcc 2520 catagtggtt gtactagttt acgttcccac caacagtgta catcctcacc agcattcctt 2580 atttctacat cctcgccagc attccttatt gcctgtcttc tggataaaag ccagtttatc 2640 tggggtggga tgttatctcg taggagtttt gatttgcctt catctgttga cgaatgatgt 2700 tgagcacctt ttcatatacc tgtttgccat ttatatgtct tcttttgaga aatgactatt 2760 cagatctttt ctcattttta aattggatta ttatattttt ttttcctata gttgttcgag 2820 ctccttatat gtttcagtta ctgatccttt gtcagatgaa tagtttgaaa atattttctc 2880 ccattcttgg atggtctctt cattttgttt attgtttcct ttgctgtgca gaagcctttt 2940 tacttgatat gatcccattt atgcaatttt actttggtta cctgtgcttg tggggtatta 3000 ctttaaaaat ctttgcccag tccaatatcc tagagagttt ccccaatgtt ttcttgtata 3060 gtttcatagt ttgaggtcat agatttacat ctttaatcca ctttgatttg atttttgtat 3120 atggtgaaag acagggtcta gtttcattct tctgcataag gatatctagt ttccccagca 3180 ccatttttga agagactctc ctttgccaat gtgtgttctt ggtacctttg ttggaaatga 3240 gtttactgta gatgtatgga attgtttctg ggttctctat tctgtttcat tggtctgtgt 3300 gtctgttttt atgccagtat catgctgttt tggttactgt agctctgtag tataatttga 3360 agtcagataa tgtgattcct ctagttttgt tcattttgct caggatagct ttatctattc 3420 tggttttttt gtggttccat atgcatttta ggattatttt tattatttct gtgaagaatg 3480 tcattagtgt tttgataggg attgcattga atctgtagat tactttgggt agtatggata 3540 tttcaacaaa actgattctt ccaatccatg aacgtggact atcttttcca ttttttgtgt 3600 ccttcaattt tttgcatcag tgttttttgt ttttggtttt tgagatggag tttcactctt 3660 gttgcccagg ctagaatgca agggtgtgat cttggctcac cgcaacctcc gcctcccagg 3720 ttcaagcgat tcttctgcct cagcctccca agtagctggg attacaggca tgtgccactg 3780 tgcctggcta attttctatt tttattagag atggggtttc tctatgttgg ccaggctagt 3840 cttgaactcc tgacctcagg tgatccacct gcctcggcct cccaaagtgc tgggattaca 3900 ggcatgagcc accacgccca gccacatcac tgttttatag tttttattgg agaggtcttt 3960 cacttcttca gttaggttta ttcctcagta ttttatttta tttgtagcta ttgtaaatgg 4020 gattcgtttc ttgatttctt tttcagatta tttgctgtta gcactgattt ttgcatgttg 4080 attttgtatc ctgcaacttt actgaatttg ttcttcagtt ctaatggttt tttggtggag 4140 tctttaggtt tttccaaata tcagaccaca tgatctgcaa acaaggataa tttgacttct 4200 tcttttccag ttttaatgcc ctttctttct ttctcctgtc tgattgctct agttaggatc 4260 tgcagtactg tgttgcataa ctgtggtaaa attagtcatc cttgtcttat tccagatctt 4320 agagaaaagg ctttcagttt tcccccattc agtatgttac tagctgtgag tttgtcatat 4380 atggctttta ttatattgag gtctgttcct tgtatactta gttttttgag agtttttatc 4440 atgaagggat gttgaattta tcaaatgctt tttcagtatc aattgaatga tactggcttt 4500 tgtcctttat tctgttgata tgacgtatta cattgattga tttgtgtatg ttaaatcatc 4560 cttgcatacc tggaatacat tccacttgct cataaagaat gatctttttt aatgtattgt 4620 tgaatgtggt ttgctagtat ttccttgacg atttttgcat cggtgttcat cagggatata 4680 ggcctgtagt tttctttttt atgatgtgtc tttgcctggt ttttgtatca ggatattcct 4740 ggctttgtaa aatgagtttg gaagtattcc ctcctcctct atttttcaga acagtttgaa 4800 taggactgac atatgttgtt ctttaaaagt ttaattgtgg taaattatac attacataaa 4860 ttttactgtt ttaaccactt ttaagtgtat actcggtggc attagataca ttcacatttt 4920 tgtgcaaccc aaaactctgt gcccattaat cggtaactcc ccattcctcc ctacctctgg 4980 cccctggtaa ccaccattct actttttgtt tctatgaatt tgaccactct aggtacctca 5040 tttaagcaga atcatgtaat gtttgtcttt ttgtttctgg cttatttcac ttataatatt 5100 tttgaggttc ggtgggcaca gtggctcacg cctggatttc cagcactttg ggaggttgaa 5160 gcaggtggat caccagagtt tcggagttcg aaaccagcct ggccagcctg gccaacatgg 5220 tgaaacccca tctctactaa aaataataaa agttagccgg gcgtgatggc gggtgcctgt 5280 aatcccaact acttggaagg ctgaggcagg agaatcgctt gaatccggga agtggaggtt 5340 gcagtgagct gagatcaggc cactgcactc cagcctgggc aacaagagtg aaattccatc 5400 tccaaaaaaa aaataaaaca ataataataa taatattttt gaggttcatc caagttgtag 5460 tatgggtcag aatttcattc cttttaagga tggataatac tcattatatg tatgtaccac 5520 atcttggtta tccatccctc agacaacgga cacttgggtt acttctacct tttggatatt 5580 ggcaaatatt tcatttcctt tgggtatata tttatttcct ttgggtattt cttttgggta 5640 tatatccaga aatagaagca gtacacaggg gcttcatttt ctctgtctct ttgccaacct 5700 tgctctgtgt gtgtgtgtgt gtgtgtgtgt gtgtgtgtgt gtaggtgtgt gataacagcc 5760 atcctgattg gtttcaggtg gcatctcatt gtggtttgga tttccatttt cctaatgagt 5820 gctgatattg agcatctttt catgtgtttg ttgatcattt gtaattttct ttgaagaatt 5880 ggccatttaa gtcttttgcc cattttttcc cccacatagc ttctcatggc tactttgccc 5940 attttttagt gggttgactg tttttgttgt ttttgtcaga cttttttata tattctggaa 6000 actaatctct tatcagatat atgacttgca atatttattt catttcgggg ttgattgctt 6060 tttcactctg attgtgtcct ttgatgcata gatgttttga attttcatca gtctactttg 6120 tcagttcttt ctattctatc tgtgctttgg tgtcatatcc atgaaagcac tgtcaaatcc 6180 tatgtcatga acattatccc caatgtttgc ttctaagaaa tttttaggtt ttagttcttg 6240 agtgtagagt ttaggtcttt gattcatttt gagttaattt ttgtatatag tgcaaattaa 6300 gagtccaatt ttattttaac accccctgcc cccagaacta tttgctgaaa agatcaactg 6360 actctttgtc acctgctcac cccagtggac actagctgtt ccatccaatt gctgtcctgg 6420 ggccttgtca tgccactctt ccactttgaa cccaagccca caccgttgct cccctctggg 6480 atactgaccc cactataaac ttcactgggg ctacaacctt cctacccctt gtgcctcatg 6540 accaccccct cccttgtccc caccatgccc atgatgagtc tcttctcgag gcagctcccc 6600 ttgcctccat ctcaccctca cctgtgcacc acagccacac tggacatggg tccctctgag 6660 cctgagtccc ttcccattcc cactgtcccc tctggcaaga ccttccttcc accaccttca 6720 tgctcctccc tcgcccctgc agggcagcct ctccccttgg cccctattcc cttagggggc 6780 ttgtggccac ccagtccttg cacctggcct acaagtttgc catcttcatt cccccttctt 6840 ctgttcatca gccccctcct ctatcctccc accctcacag ttttctttgt atatgaaatc 6900 ctcgttcttg tccctttgcc cgtgtgcatt tcctgcctcc tcaggaaggt tgggacagca 6960 gacctgtgtg ttaaacatca atgtgaagtt acttccagga agaagtttca cctgtgattt 7020 cctcttcccc agagccccac agtcttcgtt ataacctcac ggtgctgtcc tgggatggat 7080 ctgtgcagtc agggtttctc gctgaggtac atctggatgg tcagcccttc ctgcgctgtg 7140 acaggcagaa atgcagggca aagccccagg gacagtgggc agaagatgtc ctgggaaata 7200 agacatggga cagagagacc agggacttga cagggaacgg aaaggacctc aggatgaccc 7260 tggctcatat caaggaccag aaagaaggtg agagtcggca ggggcaagag tgactggaga 7320 ggccttttcc agaaaagtta ggggcagaga gcggggacct gtatctaccc actggatctg 7380 gctcaggctg ggggtgagga atgggggtca gtggaactca gcagggaggt gagccggcac 7440 tcagcccaca cagggaggca tggaggaggg ccagggaggc gtaccccctg ggctgagttc 7500 ctcacttggg tggaaaggtg atgggttcgg gaatggagaa gtcactgctg ggtgggggca 7560 ggcttgcatt ccctccagga gattagggtc tgtgagatcc atgaagacaa cagcaccagg 7620 agctcccagc atttctacta cgatggggag ctcttcctct cccaaaacct ggagactgag 7680 gaatggacaa tgccccagtc ctccagagct cagaccttgg ccatgaacgt caggaatttc 7740 ttgaaggaag atgccatgaa gaccaagaca cactatcacg ctatgcatgc agactgcctg 7800 caggaactac ggcgatatct aaaatccggc gtagtcctga ggagaacagg taccgacgct 7860 ggccaggggc tctcctctcc ttccaattct gctagagttg cctcacctcc cagatgtgtc 7920 cagggaaacc ctccctgtgc tatggatgaa ggcatttcct gttggcacat cgtgtcctga 7980 ttttcctcta ttgttagagc cactggataa agacagtggg tcagggactg gaccatccag 8040 tgttgtaatc agggcaagta gaggaccctc cgacagaatc ctgagcctgg ggtgggtgtc 8100 aggcaggaga ggaaggcttc agggccaggg ctgccccctc tgcctcccag cctgcccatc 8160 ctggagagtt ccctcctggc cccacaaccc aggagtccac ccctgacatc cccctcctca 8220 gcatcaatgt ggggatccca gagcctgagg ccacagtccc atggcccatc ctcctgccag 8280 cctggaagaa ctgggcccca gagtgaggac agacttgcag gtcaggggtc ccagagggct 8340 tcagccagag tgagaacagt gaagagaaac agccctgttc ctctcccctc cttagagggg 8400 agcagggctt cactggctct gccctttctt ctccagtgcc ccccatggtg aatgtcaccc 8460 gcagcgaggc ctcagagggc aacattaccg tgacatgcag ggcttctggc ttctatccct 8520 ggaatatcac actgagctgg cgtcaggatg gggtatcttt gagccacgac acccagcagt 8580 ggggggatgt cctgcctgat gggaatggaa cctaccagac ctgggtggcc accaggattt 8640 gccaaggaga ggagcagagg ttcacctgct acatggaaca cagcgggaat cacagcactc 8700 accctgtgcc ctctggtgag cctagggtga ccctggagag ggtcaggcca gggtagggac 8760 agcagggatg gctgtggctc tctgcccagt gtataacaag tccctttttt ttcagggaaa 8820 gtgctggtgc ttcagagtca ttggcagaca ttccatgttt ctgctgttgc tgctgctgct 8880 gctgctgctg ctgctatttt tgttattatt attttctacg tctgttgttg taagaagaaa 8940 acatcagctg cagagggtcc aggtgagaaa agcgggcagt ttctggagat ggtaaggccc 9000 ctgtctgggc agtagggtcc cctcattgct cctgcaaaga taggcatgtt ggtgacaagg 9060 cttctgtaac aggggatgaa agttggggaa tttgggaagg gaatgggggc aacatctcca 9120 tctacaccca taagtgctgc ccaagcgagg gtcaaacgcc cagctgtggc atcttcctgc 9180 tgcaggtgag gagtgggcag cagggagggc tgcggcgcct gctctgtccc catcccggtc 9240 tctgtgtctc ttggactcac tagggcgcat ccaggtgggg tgagctggga atcacgtgct 9300 gaatgctgag gacctggatg atcacggcct cagagggagc aaatagtaaa ggcagctgtg 9360 atctggggag ggccagaaac tggagaggaa tctgaggaga ggcggtgccc ctattccctt 9420 cctctctgca tccctctccc ctatttctcc agccattggg gcggacacca agaaaaagac 9480 ctatgaggcc cagcctgggg gccctgcctg tgtagccctt tggagacccc ttgtaacagg 9540 gagggtcctg agcacacatg gccatctctg tccacttttc agctccccat gcacctcctc 9600 caggagcttt cttggggttg tcgtgtcctc tgcaccattc gaggccctac tctttccagg 9660 ttcccacagc ctggtctccc tgagtttctt gcagatgaga tggatgagta gataagcaga 9720 tgtccctggg ccatttgagg agtggggccc agcccctcat cagggcagct gtggtccctg 9780 ttttcatcct acctccgagt gttttcttct ccagtccctg agggacacag tcctcagggc 9840 ccatgttttt ggggctttaa tctgtgctct gtggcctcac cttgccctcc ctgagccaat 9900 ttccctttct aaaggtggtc actgcctggt aagtttggag taagggacgg tcagaatcat 9960 ttcccctaca gtcaggttgt ttgatggggg atgaaaagag acagcaggaa gttttgtgtt 10020 tctgcaaaga cagaagcagt tcaggggaca gtaagaggct ggggtgtcca ggagggtgtg 10080 tctggcagta gggtcgctgg tttctcatcc ttgaacctaa ttgcactgtc agtcggcccc 10140 tcaggcctga gcagatggga aggtttgtcc cctgccctgc agtaagaggg ccctgtccag 10200 gaggcaccca taacaggggc agtgcaggtc tgtggtcgct cctgctctca cctgtggcgt 10260 ctcccgtaga gggattatca gttctggttc cctgtgggca ggaatggttt cctcataggt 10320 cactggagtt ttggccagga aaagagtatg aagttcatgt gccagtttct caaaattcct 10380 gctttcaatg ttgatgtcaa gcaaagatat tcgtaatttc agctctataa tcttaatagg 10440 atttccccta atattgtaaa gcatcttata tgaaacagga acacaaattt ctcaaaattc 10500 ctgcgatgtc caataaagat tttcataatt tcggctctcc aatcttaata ggatttccta 10560 atactgtaaa gcatattaaa tgaaacagga acccaaattt ggagccccct ctccaggagg 10620 ttctgtgtgg agatggtggc tgtggcagtg gcagttccca ggtgcagagg gtgggcagag 10680 gcagcctcag gctaaggggt ctcccctact ccacatggag aaaatccctt gtaggttgca 10740 agggcagtgg ccgggtggaa tccctgctag ggacagagca ggaaggcctc gcagcctcac 10800 caagcagcag ccctggggtg gagctgcgtt tccagggtta agcggaccag gcaggagcag 10860 tggttactca acagcaggtc acaggcttgg gttgtgaggg tcaggagagg ccaggcctcc 10920 tcgagcaagg tgggggtccc agggtcaggt caggtgcaga tcctgtggca gccacgtctt 10980 tccatgctgg gcctgctggg ccccccaggc tttctgatgg ggtccccagt taggagctgc 11040 ctgctcaggg ctgggagggg aggagcgctg agctgcagat agagggcaga gcccacagtg 11100 ggcagggcct gccctggtgt gtaggtgcct ctgcaggaga ggagggcctg gggactgaga 11160 gcaagggtca gggcctctct ttgaggaggc ctctcactgt aacaggactg gtcaggcctg 11220 agaggaggtc actgggttcc ctcttgggtc ttgtccttta gtcttggggc cctttccctc 11280 cctgcacgat gagtggtggg cacagggcag gggctgatgt tgatggagtg atgggaggga 11340 actggtaggg gctgggaaaa gcaaggaggg aggaagaaaa aagtgggggc ctcatcttct 11400 ctcagagaaa gggcgaatct ggttttggag caactgaaga gagaaaagtc cccagggaat 11460 aaacacaaca ctgcacccag tggagcattt acccgtttcc ctcttttctc cagagctcgt 11520 gagcctgcag gtcctggatc aacacccagt tgggacgagt gaccacaggg atgccacaca 11580 gctcggattt cagcctctga tgtcagatct tgggtccact ggctccactg agggcgccta 11640 gactctacag ccaggcagct g 11661 //