Dbfetch
ID LR537277; SV 1; linear; genomic DNA; STD; HUM; 3851 BP.
XX
AC LR537277;
XX
PR Project:PRJEB31897;
XX
DT 23-JUL-2020 (Rel. 144, Created)
DT 23-JUL-2020 (Rel. 144, Last updated, Version 1)
XX
DE Homo sapiens, HLA-B gene for MHC class I antigen, cell line
DE DKMS-LSL_ID16053685_B_1, allele HLA-B*18:new
XX
KW .
XX
OS Homo sapiens (human)
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae;
OC Homo.
XX
RN [1]
RA Albrecht V., Schmidt H. A., Klussmeier A., Lange V., Putke K.;
RT ;
RL Submitted (28-MAR-2019) to the INSDC.
RL DKMS LIFE SCIENCE LAB, Research & Development, St. Petersburger Str. 2,
RL Saxony, 01069 Dresden, Germany
XX
DR MD5; 76bcdf16e44e1ac814b3af3751db0398.
XX
FH Key Location/Qualifiers
FH
FT source 1..3851
FT /organism="Homo sapiens"
FT /mol_type="genomic DNA"
FT /cell_line="DKMS-LSL_ID16053685_B_1"
FT /db_xref="taxon:9606"
FT exon 1..357
FT /gene="HLA-B"
FT /allele="HLA-B*18:new"
FT /number=1
FT CDS join(285..357,486..755,1002..1277,1850..2125,2230..2346,
FT 2788..2820,2927..2970)
FT /codon_start=1
FT /transl_table=1
FT /gene="HLA-B"
FT /allele="HLA-B*18:new"
FT /product="MHC class I antigen"
FT /function="antigen presenting molecule"
FT /protein_id="VGN35657.1"
FT /translation="MRVTAPRTLLLLLWGAVALTETWAGSHSMRYFHTSVSRPGRGEPR
FT FISVGYVDGTQFVRFDSDAASPRTEPRAPWIEQEGPEYWDRNTQISKTNTQTYRESLRN
FT LRGYYNQSEAGSHTLQRMYGCDVGPDGRLLRGHDQSAYDGKDYIALNEDLSSWTAADTA
FT AQITQRKWEAARVAEQLRAYLEGTCVEWLRRHLENGKETLQRADPPKTHVTHHPISDHE
FT ATLRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDRTFQKWAAVVVPSGEEQRY
FT TCHVQHEGLPKPLTLRWEPSSQSTIPIVGIVAGLAVLAVVVIGAVVATVMCRRKSSGGK
FT GGSYSQAASSDSAQGSDVSLTA"
FT intron 358..485
FT /gene="HLA-B"
FT /allele="HLA-B*18:new"
FT /number=1
FT exon 486..755
FT /gene="HLA-B"
FT /allele="HLA-B*18:new"
FT /number=2
FT intron 756..1001
FT /gene="HLA-B"
FT /allele="HLA-B*18:new"
FT /number=2
FT exon 1002..1277
FT /gene="HLA-B"
FT /allele="HLA-B*18:new"
FT /number=3
FT intron 1278..1849
FT /gene="HLA-B"
FT /allele="HLA-B*18:new"
FT /number=3
FT exon 1850..2125
FT /gene="HLA-B"
FT /allele="HLA-B*18:new"
FT /number=4
FT intron 2126..2229
FT /gene="HLA-B"
FT /allele="HLA-B*18:new"
FT /number=4
FT exon 2230..2346
FT /gene="HLA-B"
FT /allele="HLA-B*18:new"
FT /number=5
FT intron 2347..2787
FT /gene="HLA-B"
FT /allele="HLA-B*18:new"
FT /number=5
FT exon 2788..2820
FT /gene="HLA-B"
FT /allele="HLA-B*18:new"
FT /number=6
FT intron 2821..2926
FT /gene="HLA-B"
FT /allele="HLA-B*18:new"
FT /number=6
FT exon 2927..3851
FT /gene="HLA-B"
FT /allele="HLA-B*18:new"
FT /number=7
XX
SQ Sequence 3851 BP; 729 A; 1099 C; 1177 G; 846 T; 0 other;
gatcaggacg aagtcccagg ccccgggcgg ggctctcagg gtctcaggct ccgagagcct 60
tgtctgcatt ggggaggcgc agcattgggg attccccact cccacgagtt tcacttcttc 120
tcccaaccta tgtcgggtcc ttcttccagg atactcgtga cgcgtcccca tttcccactc 180
ccattgggtg tcgggtgtct agagaagcca atcagtgtcg ccggggtccc agttctaaag 240
tccccacgca cccacccgga ctcagaatct cctcagacgc cgagatgcgg gtcacggcgc 300
cccgaaccct cctcctgctg ctctgggggg cagtggccct gaccgagacc tgggctggtg 360
agtgcggggt cggcagggaa atggcctctg tggggaggag cgaggggacc gcaggcgggg 420
gcgcaggacc cggggagccg cgccgggagg agggtcgggc gggtctcagc ccctccttgc 480
cccaggctcc cactccatga ggtatttcca cacctccgtg tcccggcccg gccgcgggga 540
gccccgcttc atctcagtgg gctacgtgga cggcacccag ttcgtgaggt tcgacagcga 600
cgccgcgagt ccgaggacgg agccccgggc gccgtggata gagcaagagg ggccggagta 660
ttgggaccgg aacacacaga tctccaagac caacacacag acttaccgag agagcctgcg 720
gaacctgcgc ggctactaca accagagcga ggccggtgag tgaccccggc ccggggcgca 780
ggtcacgact ccccatcccc cacgtacggc ccgggtcgcc ccgagtctcc gggtccgaga 840
tccgcccccc tgaggccgcg ggacccgccc agaccctcga ccggcgagag ccccaggcgc 900
gtttacccgg tttcattttc agttgaggcc aaaatccccg cgggttggtc ggggcggggc 960
ggggctcggg gggacggggc tgaccgcggg gccggggcca gggtctcaca ccctccagag 1020
gatgtacggc tgcgacgtgg ggccggacgg acgcctcctc cgcgggcatg accagtccgc 1080
ctacgacggc aaggattaca tcgccctgaa cgaggacctg agctcctgga ccgcggcgga 1140
caccgcggct cagatcaccc agcgcaagtg ggaggcggcc cgtgtggcgg agcagctgag 1200
agcctacctg gagggcacgt gcgtggagtg gctccgcaga cacctggaga acgggaagga 1260
gacgctgcag cgcgcgggta ccaggggcag tggggagcct tccccatctc ctataggtcg 1320
ccggggatgg cctcccacga gaagaggagg aaaatgggat cagcgctaga atgtcgccct 1380
cccttgaatg gagaatggca tgagttttcc cgagtttcct ctgagggccc cctcttctct 1440
ctaggacaat taagggatga cgtctctgag gaaatggagg ggaagacagt ccctagaata 1500
ctgatcaggg gtcccctttg acccctgcag cagccttggg aaccatgact tttcctctca 1560
ggccttgttc tctgcctcac actcagtgtg tttggggctc tgattccagc acttctgagt 1620
cactttacct ccactcagat caggagcaga agtctctgtt ccccgctcag agactcgaac 1680
tttccaatga atagattatc ccaggtgcct gcgtccaggc tggtgtctgg gttctgtgcc 1740
ccttccccac cccaggtgtc ctgtccattc tcaggctggt cacatgggtg gtcctagggt 1800
gtcccatgag agatgcaaag cgcctgaatt ttctgactct tcccatcaga ccccccaaag 1860
acacatgtga cccaccaccc catctctgac catgaggcca ccctgaggtg ctgggccctg 1920
ggcttctacc ctgcggagat cacactgacc tggcagcggg atggcgagga ccaaactcag 1980
gacaccgagc ttgtggagac cagaccagca ggagatagaa ccttccagaa gtgggcagct 2040
gtggtggtgc cttctggaga agagcagaga tacacatgcc atgtacagca tgaggggctg 2100
ccgaagcccc tcaccctgag atggggtaag gagggggatg aggggtcata tctcttctca 2160
gggaaagcag gagcccttct ggagcccttc agcagggtca gggcccctca tcttcccctc 2220
ctttcccaga gccatcttcc cagtccacca tccccatcgt gggcattgtt gctggcctgg 2280
ctgtcctagc agttgtggtc atcggagctg tggtcgctac tgtgatgtgt aggaggaaga 2340
gctcaggtag ggaaggggtg aggggtgggg tctgggtttt cttgtcccac tgggggtttc 2400
aagccccagg tagaagtgtt ccctgcctca ttactgggaa gcagcatcca cacaggggct 2460
aacgcagcct gggaccctgt gtgccagcac ttactctttt gtgcagcaca tgtgacaatg 2520
aaggacggat gtatcacctt gatggttgtg gtgttggggt cctgattcca gcattcatga 2580
gtcaggggaa ggtccctgct aaggacagac cttaggaggg cagttggtcc aggacccaca 2640
cttgctttcc tcgtgtttcc tgatcctgcc ttgggtctgt agtcatactt ctggaaattc 2700
cttttggttc caagacgagg aggttcctct aagatctcat ggccctgctt cctcccagtc 2760
ccctcacagg acattttctt cccacaggtg gaaaaggagg gagctactct caggctgcgt 2820
gtaagtggtg ggggtgggag tgtggaggag ctcacccacc ccataattcc tcctgtccca 2880
cgtctcctgc gggctctgac caggtcctgt ttttgttcta ctccagccag cgacagtgcc 2940
cagggctctg atgtgtctct cacagcttga aaaggtgaga ttcttggggt ctagagtggg 3000
cgggggggcg gggagggggc agaggggaaa ggcctgggta atggagattc tttgattggg 3060
atgtttcgcg tgtgtggtgg gctgttcaga gtgtcatcac ttaccatgac taaccagaat 3120
ttgttcatga ctgttgtttt ctgtagcctg agacagctgt cttgtgaggg accgagatgc 3180
aggatttctt cacgcctccc ctttgtgact tcaagagcct ctggcatctc tttctgcaaa 3240
ggcacctgaa tgtgtctgcg tccctgttag cataatgtga ggaggtggag agacagccca 3300
cccccgtgtc caccgtgacc cctgttccca tgctgacctg tgtttcctcc ccagtcatct 3360
ttcttgttcc agagaggtgg ggctggatgt ctccatctct gtctcaactt tatgtgcact 3420
gagctgcaac ttcttacttc cctactgaaa ataagaatct gaatataaat ttgttttctc 3480
aaatatttgc tatgagaggt tgatggatta attaaataag tcaattcctg gaatttgaga 3540
gagcaaataa agacctgaga accttccaga atctgcatgt tcgctgtgct gagtctgttg 3600
caggtggggt gtggagaagg ctgtgggggg ccgagtgtgg atggggcctg tgcccatttg 3660
gtgttgagtc catcatgggc tttatgtggt tagtcctcag ctgggtcacc ttcactgctc 3720
cattgtcctt gtcccttcag tggaaacttg tccagtggga gctgtgacca cagaggctca 3780
cacatcgccc agggcggccc ctgcacacgg gggtctctgt gcattctgag acaaattttc 3840
agagccattc a 3851
//