Dbfetch
ID LR537157; SV 1; linear; genomic DNA; STD; HUM; 3863 BP.
XX
AC LR537157;
XX
PR Project:PRJEB31897;
XX
DT 23-JUL-2020 (Rel. 144, Created)
DT 23-JUL-2020 (Rel. 144, Last updated, Version 1)
XX
DE Homo sapiens, HLA-B gene for MHC class I antigen, cell line
DE DKMS-LSL_ID15595613_B_1, allele HLA-B*15:new
XX
KW .
XX
OS Homo sapiens (human)
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae;
OC Homo.
XX
RN [1]
RA Albrecht V., Schmidt H. A., Klussmeier A., Lange V., Putke K.;
RT ;
RL Submitted (28-MAR-2019) to the INSDC.
RL DKMS LIFE SCIENCE LAB, Research & Development, St. Petersburger Str. 2,
RL Saxony, 01069 Dresden, Germany
XX
DR MD5; fcf9fe6d9a6c2055cc637a5ef59a39ab.
XX
FH Key Location/Qualifiers
FH
FT source 1..3863
FT /organism="Homo sapiens"
FT /mol_type="genomic DNA"
FT /cell_line="DKMS-LSL_ID15595613_B_1"
FT /db_xref="taxon:9606"
FT exon 1..357
FT /gene="HLA-B"
FT /allele="HLA-B*15:new"
FT /number=1
FT CDS join(285..357,486..755,1001..1276,1852..2127,2232..2348,
FT 2790..2822,2929..2972)
FT /codon_start=1
FT /transl_table=1
FT /gene="HLA-B"
FT /allele="HLA-B*15:new"
FT /product="MHC class I antigen"
FT /function="antigen presenting molecule"
FT /protein_id="VGN35537.1"
FT /translation="MRVTAPRTVLLLLSGALALTETWAGSHSMRYFYTAMSRPGRGEPR
FT FIAVGYVDDTQFVRFDSDAASPRMAPRAPWIEQEGPEYCDRETRNMKASAQTYRENLRI
FT ALRYYNQSEAGSHTLQRMYGCDVGPDGRLLRGYHQDAYDGKDYIALNEDLSSWTAADTA
FT AQITQRKWEAAREAEQLRAYLEGLCVEWLRRYLENGKETLQRADPPKTHVTHHPISDHE
FT ATLRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDRTFQKWAAVVVPSGEEQRY
FT TCHVQHEGLPKPLTLRWEPSSQSTIPIVGIVAGLAVLAVVVIGAVVATVMCRRKSSGGK
FT GGSYSQAASSDSAQGSDVSLTA"
FT intron 358..485
FT /gene="HLA-B"
FT /allele="HLA-B*15:new"
FT /number=1
FT exon 486..755
FT /gene="HLA-B"
FT /allele="HLA-B*15:new"
FT /number=2
FT intron 756..1000
FT /gene="HLA-B"
FT /allele="HLA-B*15:new"
FT /number=2
FT exon 1001..1276
FT /gene="HLA-B"
FT /allele="HLA-B*15:new"
FT /number=3
FT intron 1277..1851
FT /gene="HLA-B"
FT /allele="HLA-B*15:new"
FT /number=3
FT exon 1852..2127
FT /gene="HLA-B"
FT /allele="HLA-B*15:new"
FT /number=4
FT intron 2128..2231
FT /gene="HLA-B"
FT /allele="HLA-B*15:new"
FT /number=4
FT exon 2232..2348
FT /gene="HLA-B"
FT /allele="HLA-B*15:new"
FT /number=5
FT intron 2349..2789
FT /gene="HLA-B"
FT /allele="HLA-B*15:new"
FT /number=5
FT exon 2790..2822
FT /gene="HLA-B"
FT /allele="HLA-B*15:new"
FT /number=6
FT intron 2823..2928
FT /gene="HLA-B"
FT /allele="HLA-B*15:new"
FT /number=6
FT exon 2929..3863
FT /gene="HLA-B"
FT /allele="HLA-B*15:new"
FT /number=7
XX
SQ Sequence 3863 BP; 724 A; 1095 C; 1186 G; 858 T; 0 other;
gatcaggacg aagtcccagg tcccggacgg ggctctcagt gtctcaggct ccgagagcct 60
tgtctgcatt ggggaggcgc agcgttgggg attccccact cccacgagtt tcacttcttc 120
tcccaaccta tgtcgggtcc ttcttccagg atactcgtga cgcgtcccca tttcccactc 180
ccattgggtg tcgggtgtct agagaagcca atcagtgtcg ccggggtccc agttctaaag 240
tccccacgca cccacccgga ctcagaatct cctcagacgc cgagatgcgg gtcacggcgc 300
cccgaaccgt cctcctgctg ctctcgggag ccctggccct gaccgagacc tgggccggtg 360
agtgcgggtc gggagggaaa tggcctctgt ggggaggagc gaggggaccg caggcggggg 420
cgcaggaccc ggggagccgc gccgggagga gggtcgggcg ggtctcagcc cctcctcgcc 480
cccaggctcc cactccatga ggtatttcta caccgccatg tcccggcccg gccgcgggga 540
gccccgcttc atcgcagtgg gctacgtgga cgacacccag ttcgtgaggt tcgacagcga 600
cgccgcgagt ccgaggatgg cgccccgggc gccatggata gagcaggagg ggccggagta 660
ttgtgaccgg gagacacgga acatgaaggc ctccgcgcag acttaccgag agaacctgcg 720
gatcgcgctc cgctactaca accagagcga ggccggtgag tgaccccggc ccggggcgca 780
ggtcacgact ccccatcccc cacgtacggc ccgggtcgcc ccgagtctcc gggtccgaga 840
tccgcccccc tgaggccgcg ggacccgccc aaaccctcga ccggcgagag ccccaggcgc 900
gtttacccgg tttcattttc agttgaggcc aaaatccccg cgggttggtc ggggcggggc 960
ggggctcggg ggacggggct gaccgcgggg cctgggccag ggtctcacac cctccagagg 1020
atgtacggct gcgacgtggg gccggacggg cgcctcctcc gcgggtacca ccaggacgcc 1080
tacgacggca aggattacat cgccctgaac gaggacctga gctcctggac cgcggcggac 1140
acggcggctc agatcaccca gcgcaagtgg gaggcggccc gtgaggcgga gcagctgaga 1200
gcctacctgg agggcctgtg cgtggagtgg ctccgcagat acctggagaa cgggaaggag 1260
acgctgcagc gcgcgggtac caggggcagt ggggagcctt ccccatctcc tataggtcgc 1320
cggggatggc ctcccacgag aagaggagga aaatgggatc agcgctagaa tgtcgccctc 1380
ccttgaatgg agaatggcat gagttttcct gagtttcctc tgagggcccc ctcttctctc 1440
taggacaatt aagggatgac gtctctgagg aaatggaggg gaagacagtc cctaggatag 1500
tgatcagggg tcccctttga cccctgcagc agccttggga accgtgactt ttcctctcag 1560
gccttgttct ctgcctcaca ctcagtgtgt ttggggctct gattccagca cttctgagtc 1620
actttacctc cactcagatc aggagcagaa gtccctgttc cccgctcaga gactcgaact 1680
ttccaatgaa taggagatta tcccaggtgc ctgcgtccag gctggtgtct gggttctgtg 1740
ccccttcccc accccaggtg tcctgtccat tctcaggctg gtcacatggg tggtcctagg 1800
gtgtcccatg agagatgcaa agcgcctgaa ttttctgact cttcccatca gaccccccaa 1860
agacacatgt gacccaccac cccatctctg accatgaggc caccctgagg tgctgggccc 1920
tgggcttcta ccctgcggag atcacactga cctggcagcg ggatggcgag gaccaaactc 1980
aggacaccga gcttgtggag accagaccag caggagatag aaccttccag aagtgggcag 2040
ctgtggtggt gccttctgga gaagagcaga gatacacatg ccatgtacag catgaggggc 2100
tgccgaagcc cctcaccctg agatggggta aggaggggga tgaggggtca tatctgttct 2160
cagggaaagc aggagccctt ctggagccct tcagcagggt cagggcccct catcttcccc 2220
tcctttccca gagccatctt cccagtccac catccccatc gtgggcattg ttgctggcct 2280
ggctgtccta gcagttgtgg tcatcggagc tgtggtcgct actgtgatgt gtaggaggaa 2340
gagctcaggt agggaagggg tgaggggtgg ggtctgggtt ttcttgtccc actgggggtt 2400
tcaagcccca ggtagaagtg ttccctgcct cattactggg aagcagcatc cacacagggg 2460
ctaacgcagc ctgggaccct gtgtgccagc acttactctt ttgtgcagca catgtgacaa 2520
tgaaggacag atgtatcgcc ttgatggttg tggtgttggg gtcctgattc cagcattcat 2580
gagtcagggg aaggtccctg ctaaggacag accttaggag ggcagttggt ccaggaccca 2640
cacttgcttt cctcgtgttt cctgatcctg ccctgggtct gtagtcatac ttctggaaat 2700
tccttttggt tccaagacga ggaggttcct ctaagatctc atggtcctgc ttcctcccag 2760
tcccctcaca ggacattttc ttcccacagg tggaaaagga gggagctact ctcaggctgc 2820
gtgtaagtgg tgggggtggg agtgtggagg agctcaccca ccccataatt cctcctgtcc 2880
cacgtctcct gcgggctctg accaggtcct gtttttgttc tactccagcc agcgacagtg 2940
cccagggctc tgatgtgtct ctcacagctt gaaaaggtga gattcttggg gtctagagtg 3000
ggtggggtgg cgggtctggg ggtgggtggg gcagtgggga aaggcctggg taatggagat 3060
tctttgattg ggatgtttcg cgtgtgtcgt gggctgttca gagtgtcatc acttaccatg 3120
actaaccaga atttgttcat gactgttgtt ttctgtagcc tgagacagct gtcttgtgag 3180
ggaccgagat gcaggatttc ttcacgcctc ccctttgtga cttcaagagc ctctggcatc 3240
tctttctgca aaggcacctg aatgtgtctg cgtccctgtt agcataatgt gaggaggtgg 3300
agagacagcc cacccttgtg tccactgtga cccctgttcc catgctgatc tgtgtttcct 3360
ccccagtcat ctttcttgtt ccagagaggt ggggctggat gtctccatct ctgtctcaac 3420
tttatgtgca ctgagctgca acttcttact tccctactga aaataagaat ctgaatataa 3480
atttgttttc tcaaatattt gctatgagag gttgatggat taattaaata agtcaattcc 3540
tggaatttga aagagcaaat aaagacctga gaaccttcca gaatctgcat gttcgctgtg 3600
ctgagtctgt tgcaggtggg gtgtggagaa ggctgtgggg ggccgagtgt ggacggggcc 3660
tgtgcccatt tggtgttgag tccatcatgg gctttatgtg gttagtcctc agctgggtca 3720
ccttcactgc tccattgtcc ttgtcccttc agtggaaact tgtccagcgg gagctgtgac 3780
cacagaggct cacacatcgc ccagggcggc ccctgcacac gggggtctct gtgcattctg 3840
agacaaattt tcagagccat tca 3863
//