Dbfetch
ID LN877294; SV 2; linear; genomic DNA; STD; HUM; 3311 BP. XX AC LN877294; XX DT 29-SEP-2016 (Rel. 130, Created) DT 29-SEP-2016 (Rel. 130, Last updated, Version 1) XX DE Homo sapiens HLA-B gene for MHC class I antigen, allele HLA-B*39:06:02 XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-3311 RA Marsh S.; RT ; RL Submitted (28-JUL-2015) to the INSDC. RL HLA Informatics Group, ANRI, Royal Free Hospital, London, NW3 2QG, UNITED RL KINGDOM. XX RN [2] RA Marsh S.G.E.; RT "Full-length genomic HLA sequences"; RL Unpublished. XX DR MD5; 239958ba6e2b5784064285c7b1ce9593. DR IMGT/HLA; HLA-B*39:06:02:01; HLA00280. XX FH Key Location/Qualifiers FH FT source 1..3311 FT /organism="Homo sapiens" FT /mol_type="genomic DNA" FT /clone="AN300101" FT /db_xref="taxon:9606" FT CDS join(285..357,486..755,1001..1276,1849..2124,2218..2334, FT 2776..2808,2915..2958) FT /codon_start=1 FT /transl_table=1 FT /gene="HLA-B" FT /allele="HLA-B*39:06:02" FT /product="MHC class I antigen" FT /function="antigen presenting molecule" FT /db_xref="GOA:I3ZN83" FT /db_xref="InterPro:IPR001039" FT /db_xref="InterPro:IPR003006" FT /db_xref="InterPro:IPR003597" FT /db_xref="InterPro:IPR007110" FT /db_xref="InterPro:IPR010579" FT /db_xref="InterPro:IPR011161" FT /db_xref="InterPro:IPR011162" FT /db_xref="InterPro:IPR013783" FT /db_xref="InterPro:IPR036179" FT /db_xref="InterPro:IPR037055" FT /db_xref="UniProtKB/TrEMBL:I3ZN83" FT /protein_id="CUA55037.1" FT /translation="MLVMAPRTVLLLLSAALALTETWAGSHSMRYFYTSVSRPGRGEPR FT FISVGYVDDTQFVRFDSDAASPREEPRAPWIEQEGPEYWDRNTQICKTNTQTDRESLRN FT LRGYYNQSEAGSHTWQTMYGCDVGPDGRLLRGHNQFAYDGKDYIALNEDLSSWTAADTA FT AQITQRKWEAARVAEQLRTYLEGTCVEWLRRYLENGKETLQRADPPKTHVTHHPISDHE FT ATLRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDRTFQKWAAVVVPSGEEQRY FT TCHVQHEGLPKPLTLRWEPSSQSTVPIVGIVAGLAVLAVVVIGAVVAAVMCRRKSSGGK FT GGSYSQAASSDSAQGSDVSLTA" FT exon <285..357 FT /gene="HLA-B" FT /allele="HLA-B*39:06:02" FT /number=1 FT intron 358..485 FT /gene="HLA-B" FT /allele="HLA-B*39:06:02" FT /number=1 FT exon 486..755 FT /gene="HLA-B" FT /allele="HLA-B*39:06:02" FT /number=2 FT intron 756..1000 FT /gene="HLA-B" FT /allele="HLA-B*39:06:02" FT /number=2 FT exon 1001..1276 FT /gene="HLA-B" FT /allele="HLA-B*39:06:02" FT /number=3 FT intron 1277..1848 FT /gene="HLA-B" FT /allele="HLA-B*39:06:02" FT /number=3 FT exon 1849..2124 FT /gene="HLA-B" FT /allele="HLA-B*39:06:02" FT /number=4 FT intron 2125..2217 FT /gene="HLA-B" FT /allele="HLA-B*39:06:02" FT /number=4 FT exon 2218..2334 FT /gene="HLA-B" FT /allele="HLA-B*39:06:02" FT /number=5 FT intron 2335..2775 FT /gene="HLA-B" FT /allele="HLA-B*39:06:02" FT /number=5 FT exon 2776..2808 FT /gene="HLA-B" FT /allele="HLA-B*39:06:02" FT /number=6 FT intron 2809..2914 FT /gene="HLA-B" FT /allele="HLA-B*39:06:02" FT /number=6 FT exon 2915..>2958 FT /gene="HLA-B" FT /allele="HLA-B*39:06:02" FT /number=7 XX SQ Sequence 3311 BP; 621 A; 962 C; 1036 G; 692 T; 0 other; gatcaggacg aagtcccagg tcccggacgg ggctctcagg gtctcaggct ccgagggccg 60 cgtctgcaat ggggaggcgc agcgttgggg attccccact cccctgagtt tcacttcttc 120 tcccaacttg tgtcgggtcc ttcttccagg atactcgtga cgcatcccca cttcccactc 180 ccattgggtg tcggatatct agagaagcca atcagcgtcg ccggggtccc agttctaaag 240 tccccacgca cccacccgga ctcagagtct cctcagacgc cgagatgctg gtcatggcgc 300 cccgaaccgt cctcctgctg ctctcggcgg ccctggccct gaccgagacc tgggccggtg 360 agtgcgggtc gggagggaaa tggcctctgc cgggaggagc gaggggaccg caggcggggg 420 cgcaggacct gaggagccgc gccgggagga gggtcgggcg ggtctcagcc cctcctcgcc 480 cccaggctcc cactccatga ggtatttcta cacctccgtg tcccggcccg gccgcgggga 540 gccccgcttc atctcagtgg gctacgtgga cgacacgcag ttcgtgaggt tcgacagcga 600 cgccgcgagt ccgagagagg agccgcgggc gccgtggata gagcaggagg ggccggaata 660 ttgggaccgg aacacacaga tctgcaagac caacacacag actgaccgag agagcctgcg 720 gaacctgcgc ggctactaca accagagcga ggccggtgag tgaccccggc ccggggcgca 780 ggtcacgact ccccatcccc cacgtacggc ccgggtcgcc ccgagtctcc gggtccgaga 840 tccgcctccc tgaggccgcg ggacccgccc agaccctcga ccggcgagag ccccaggcgc 900 gtttacccgg tttcattttc agttgaggcc aaaatccccg cgggttggtc ggggcggggc 960 ggggctcggg ggacggggct gaccgcgggg ccggggccag ggtctcacac ttggcagacg 1020 atgtatggct gcgacgtggg gccggacggg cgcctcctcc gcgggcataa ccagttcgcc 1080 tacgacggca aggattacat cgccctgaac gaggacctga gctcctggac cgcggcggac 1140 accgcggctc agatcaccca gcgcaagtgg gaggcggccc gtgtggcgga gcagctgaga 1200 acctacctgg agggcacgtg cgtggagtgg ctccgcagat acctggagaa cgggaaggag 1260 acgctgcagc gcgcgggtac caggggcagt ggggagcctt ccccatctcc tataggtcgc 1320 cggggatggc ctccaacgag aagaagagga aaatgggatc agcgctagaa tgtcgccctc 1380 ccttgaatgg agaatggcat gagttttcct gagtttcctc tgagggcccc ctcttctctc 1440 taggacaatt aagggatgac gtctctgagg aaatggaggg gaagacagtc cctagaatac 1500 tgatcagggg tcccctttga cccctgcagc agccttggga accatgactt ttcctctcag 1560 gccttgttct ctgcctcaca ctcagtgtgt ttggggctct gattccagca cttctgagtc 1620 actttacctc cactcagatc aggagcagaa gtctctgttc cccgctcaga gactcgaact 1680 ttccaatgaa tagattatcc caggtgcctg cgtccaggct ggtgtctggg ttctgtgccc 1740 cttccccacc ccaggtgtcc tgtccattct caggctggtc acatgggtgg tcctagggtg 1800 tcccatgaga gatgcaaagc gcctgaattt tctgactctt cccatcagac cccccaaaga 1860 cacatgtgac ccaccacccc atctctgacc atgaggccac cctgaggtgc tgggccctgg 1920 gcttctaccc tgcggagatc acactgacct ggcagcggga tggcgaggac caaactcagg 1980 acaccgagct tgtggagacc agaccagcag gagacagaac cttccagaag tgggcagctg 2040 tggtggtgcc ttctggagaa gagcagagat acacatgcca tgtacagcat gaggggctgc 2100 cgaagcccct caccctgaga tggggtaagg agggggatga ggggtcatat ctcttctcag 2160 ggaaagcagg agcccttcag cagggtcagg gcccctcatc ttcccctcct ttcccagagc 2220 catcttccca gtccaccgtc cccatcgtgg gcattgttgc tggcctggct gtcctagcag 2280 ttgtggtcat cggagctgtg gtcgctgctg tgatgtgtag gaggaagagt tcaggtaggg 2340 aaggggtgag gggtggggtc tgggttttct tgtcccactg ggggtttcaa gccccaggta 2400 gaagtgttcc ctgcatcatt actgggaagc agcatgcaca caggggctaa cgcagcctgg 2460 gaccctgtgt gccagcactt actcttttgt gcagcacatg tgacaatgaa ggacggatgt 2520 atcaccttga tggttgtggt gttggggtcc tgattccagc attcatgagt caggggaagg 2580 tccctgctaa ggacagacct taggagggca gttggtccag gacccacact tgctttcctc 2640 gtgtttcctg atcctgccct gggtctgtag tcatacttct ggaaattcct tttgggtcca 2700 agactaggag gttcctctaa gatctcatgg ccctgcttcc tcccagtccc ctcacaggac 2760 attttcttcc cacaggtgga aaaggaggga gctactctca ggctgcgtgt aagtggtggg 2820 ggtgggagtg tggaggagct cacccacccc ataattcctc ctgtcccacg tctcctgtgg 2880 gctctgacca ggtcctgttt ttgttctact ccagccagcg acagtgccca gggctctgat 2940 gtgtctctca cagcttgaaa aggtgagatt cttggggtct agagtgggcg ggggggcggg 3000 gagggggcag aggggaaagg cctgggtaat ggagattctt tgattgggat gtttcgcgtg 3060 tgtgatgggc tgttcagagt gtcatcactt accatgacta accagaattt gttcatgact 3120 gttgttttct gtagcctgag acagctgtct tgtgagggac tgagatgcag gatttcttca 3180 cgcctcccct ttgtgacttc aagagcctct ggcatctctt tctgcaaagg cacctgaatg 3240 tgtctgcgtc cctgttagca taatgtgagg aggtggagag acagcccacc cttgtgtcca 3300 ctgtgacccc t 3311 //