Dbfetch

Dbfetch

ID   LN835248; SV 1; linear; genomic DNA; STD; HUM; 556 BP.
XX
AC   LN835248;
XX
DT   01-JUN-2015 (Rel. 125, Created)
DT   13-JUN-2015 (Rel. 125, Last updated, Version 2)
XX
DE   Homo sapiens partial HLA-A gene for MHC class I antigen, allele
DE   HLA-A*02new,11, exons 2-3
XX
KW   .
XX
OS   Homo sapiens (human)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae;
OC   Homo.
XX
RN   [1]
RP   1-556
RA   Yang E.;
RT   ;
RL   Submitted (30-MAR-2015) to the INSDC.
RL   TZUCHI, Buddhist Tzu Chi General Hospital, Tzu Chi Stem Cells Center, 707
RL   Section 3 Chung Yang Road, Hualien 970, TAIWAN.
XX
RN   [2]
RA   Yang K.L.;
RT   "Discovery of a new HLA-A*02 allele in Taiwan";
RL   Unpublished.
XX
DR   MD5; fb4d6e1da0be49fd62e197ca3176b40c.
DR   IMGT/HLA; HLA-A*02:575; HLA13385.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..556
FT                   /organism="Homo sapiens"
FT                   /mol_type="genomic DNA"
FT                   /db_xref="taxon:9606"
FT   CDS             join(<1..270,281..>556)
FT                   /codon_start=3
FT                   /transl_table=1
FT                   /gene="HLA-A"
FT                   /allele="HLA-A*02new,11"
FT                   /product="MHC class I antigen"
FT                   /function="antigen presenting molecule"
FT                   /db_xref="InterPro:IPR001039"
FT                   /db_xref="InterPro:IPR011161"
FT                   /db_xref="InterPro:IPR011162"
FT                   /db_xref="InterPro:IPR037055"
FT                   /db_xref="UniProtKB/TrEMBL:A0A0G4KBJ2"
FT                   /protein_id="CRG63508.1"
FT                   /translation="SHSMRYFFTSVSRPGRGEPRFIAVGYVDDTQFVRFDSDAASQRME
FT                   PRAPWIEQEGPEYWDGETRKVKAHSQTHRVDLGTLRGYYNQSEAGSHTVQRMCGCDVGS
FT                   DWRFLRGCHQYAYDGKDYIALKEDLRSWTAADMAAQTTKHKWEAAHVAEQLRAYLEGTC
FT                   VEWLRRYLENGKETLQRT"
FT   exon            1..270
FT                   /gene="HLA-A"
FT                   /allele="HLA-A*02new,11"
FT                   /number=2
FT   gap             271..280
FT                   /estimated_length=10
FT   exon            281..556
FT                   /gene="HLA-A"
FT                   /allele="HLA-A*02new,11"
FT                   /number=3
XX
SQ   Sequence 556 BP; 109 A; 161 C; 196 G; 80 T; 10 other;
     gctctcactc catgaggtat ttcttcacat ccgtgtcccg gcccggccgc ggggagcccc        60
     gcttcatcgc agtgggctac gtggacgaca cgcagttcgt gcggttcgac agcgacgccg       120
     cgagccagag gatggagccg cgggcgccgt ggatagagca ggagggtccg gagtattggg       180
     acggggagac acggaaagtg aaggcccact cacagactca ccgagtggac ctggggaccc       240
     tgcgcggcta ctacaaccag agcgaggccg nnnnnnnnnn gttctcacac cgtccagagg       300
     atgtgtggct gcgacgtggg gtcggactgg cgcttcctcc gcgggtgcca ccagtacgcc       360
     tacgacggca aggattacat cgccctgaaa gaggacctgc gctcttggac cgcggcggac       420
     atggcagctc agaccaccaa gcacaagtgg gaggcggccc atgtggcgga gcagttgaga       480
     gcctacctgg agggcacgtg cgtggagtgg ctccgcagat acctggagaa cgggaaggag       540
     acgctgcagc gcacgg                                                       556
//