Dbfetch
ID LN811511; SV 1; linear; genomic DNA; STD; HUM; 3348 BP. XX AC LN811511; XX DT 11-FEB-2015 (Rel. 123, Created) DT 21-JUL-2017 (Rel. 133, Last updated, Version 2) XX DE Homo sapiens HLA-C gene for MHC class I antigen, allele HLA-C*03:251, cell DE line DKMS-LSL-C-399 XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-3348 RA Albrecht V.; RT ; RL Submitted (06-FEB-2015) to the INSDC. RL Research and Development, DKMS LIFE SCIENCE LAB, Fiedler Str. 34, Saxony, RL 01307 Dresden, GERMANY. XX RN [2] RX DOI; .1111/tan.13057. RX PUBMED; 28547825. RA Albrecht V., Zweiniger C., Surendranath V., Lang K., Schofl G., Dahl A., RA Winkler S., Lange V., Bohme I., Schmidt A.H.; RT "Dual redundant sequencing strategy: Full-length gene characterisation of RT 1056 novel and confirmatory HLA alleles"; RL HLA. 90(2):79-87(2017). XX DR MD5; 33fe053ddd2ce66634dcf86c9941f498. DR IMGT/HLA; HLA-C*03:251; HLA11711. XX FH Key Location/Qualifiers FH FT source 1..3348 FT /organism="Homo sapiens" FT /mol_type="genomic DNA" FT /cell_line="DKMS-LSL-C-399" FT /db_xref="taxon:9606" FT exon 1..356 FT /gene="HLA-C" FT /allele="HLA-C*03:251" FT /number=1 FT CDS join(284..356,487..756,1002..1277,1865..2140,2262..2381, FT 2821..2853,2961..3008,3173..3177) FT /codon_start=1 FT /gene="HLA-C" FT /allele="HLA-C*03:251" FT /product="MHC class I antigen" FT /function="antigen presenting molecule" FT /db_xref="GOA:A0A076FQ79" FT /db_xref="InterPro:IPR001039" FT /db_xref="InterPro:IPR003006" FT /db_xref="InterPro:IPR003597" FT /db_xref="InterPro:IPR007110" FT /db_xref="InterPro:IPR010579" FT /db_xref="InterPro:IPR011161" FT /db_xref="InterPro:IPR011162" FT /db_xref="InterPro:IPR013783" FT /db_xref="InterPro:IPR036179" FT /db_xref="InterPro:IPR037055" FT /db_xref="UniProtKB/TrEMBL:A0A076FQ79" FT /protein_id="CEP25338.1" FT /translation="MRVMAPRTLILLLSGALALTETWAGSHSMRYFYTAVSRPGRGEPH FT FIAVGYVDDTQFVRFDSDAASPRGEPRAPWVEQEGPEYWDRETQKYKRQAQTDRVSLRN FT LRGYYNQSEARSHIIQRMYGCDVGPDGRLLRGYDQYAYDGKDYIALNEDLRSWTAADTA FT AQITQRKWEAAREAEQRRAYLEGTCVEWLRRYLENGKKTLQRAEHPKTHVTHHPVSDHE FT ATLRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRY FT TCHVQHEGLPEPLTLRWGPSSQPTIPIVGIVAGLAVLAVLAVLGAVMAVVMCRRKSSGG FT KGGSCSQAASSNSAQGSDESLIACKA" FT intron 357..486 FT /gene="HLA-C" FT /allele="HLA-C*03:251" FT /number=1 FT exon 487..756 FT /gene="HLA-C" FT /allele="HLA-C*03:251" FT /number=2 FT intron 757..1001 FT /gene="HLA-C" FT /allele="HLA-C*03:251" FT /number=2 FT exon 1002..1277 FT /gene="HLA-C" FT /allele="HLA-C*03:251" FT /number=3 FT intron 1278..1864 FT /gene="HLA-C" FT /allele="HLA-C*03:251" FT /number=3 FT exon 1865..2140 FT /gene="HLA-C" FT /allele="HLA-C*03:251" FT /number=4 FT intron 2141..2261 FT /gene="HLA-C" FT /allele="HLA-C*03:251" FT /number=4 FT exon 2262..2381 FT /gene="HLA-C" FT /allele="HLA-C*03:251" FT /number=5 FT intron 2382..2820 FT /gene="HLA-C" FT /allele="HLA-C*03:251" FT /number=5 FT exon 2821..2853 FT /gene="HLA-C" FT /allele="HLA-C*03:251" FT /number=6 FT intron 2854..2960 FT /gene="HLA-C" FT /allele="HLA-C*03:251" FT /number=6 FT exon 2961..3008 FT /gene="HLA-C" FT /allele="HLA-C*03:251" FT /number=7 FT intron 3009..3172 FT /gene="HLA-C" FT /allele="HLA-C*03:251" FT /number=7 FT exon 3173..3348 FT /gene="HLA-C" FT /allele="HLA-C*03:251" FT /number=8 XX SQ Sequence 3348 BP; 626 A; 977 C; 1045 G; 700 T; 0 other; aatcaggacg aagtcccagg tcccgggcgg ggctctcagg gtctcaggct ccaagggccg 60 tgtctgcact ggggaggcgc cgcgttgagg attctccact cccctgagtt tcacttcttc 120 tcccaacctg cgtcgggtcc ttcttcctga atactcatga cgcgtcccca attcccactc 180 ccattgggtg tcggattcta gagaagccaa tcagcgtctc cgcagtcccg gttctgaagt 240 ccccagtcac ccacccggac tcagattctc cccagacgcc gagatgcggg tcatggcgcc 300 ccgaaccctc atcctgctgc tctcgggagc cctggccctg accgagacct gggccggtga 360 gtgcggggtt gggagggaat cggcctctgc ggagaggagc gaggggcccg cccggcgagg 420 gcgcaggacc cggggagccg cgcagggagg agggtcgggc gggtctcagc ccctcctcgc 480 ccccaggctc ccactccatg aggtatttct acaccgctgt gtcccggccc ggccgcgggg 540 agccccactt catcgcagtg ggctacgtgg acgacacgca gttcgtgcgg ttcgacagcg 600 acgccgcgag tccgagaggg gagccgcggg cgccgtgggt ggagcaggag gggccggagt 660 attgggaccg ggagacacag aagtacaagc gccaggcaca gactgaccga gtgagcctgc 720 ggaacctgcg cggctactac aaccagagcg aggccagtga gtgaccccgg cccggggcgc 780 aggtcacgac ccctcctcat cccccacgga cggcccgggt cgccccaagt ctcccggtct 840 gagatccacc ccgaggctgc ggaacccgcc cagaccctcg accggagaga gccccagtca 900 cctttacccg gtttcatttt cagtttaggc caaaatcccc gcgggttggt cggggcgggg 960 cggggctcgg gggacggggc tgaccgcggg ggcggggcca gggtctcaca tcatccagag 1020 gatgtatggc tgcgacgtgg ggcccgacgg gcgcctcctc cgcgggtatg accagtacgc 1080 ctacgacggc aaggattaca tcgccctgaa cgaggatctg cgctcctgga ccgccgcgga 1140 cacggcggct cagatcaccc agcgcaagtg ggaggcggcc cgtgaggcgg agcagcggag 1200 agcctacctg gagggcacgt gcgtggagtg gctccgcaga tacctggaga acgggaagaa 1260 gacgctgcag cgcgcgggta ccaggggcag tggggagcct tccccatctc ctgtagatct 1320 cccgggatgg cctcccacga ggaggggagg aaaatgggat cagcgctgga atatcgccct 1380 cccttgaatg gagaatggga tgagttttcc tgagtttctt ctgagggccc cctctgctct 1440 ctaggacaat taagggatga agtccttgag gaaatggagg ggaagacagt ccctggaata 1500 ctgatcaggg gtcccctttg accactttga ccactgcagc agctgtggtc aggctgctga 1560 cctttctctc aggccttgtt ctctgcctca cgctcaatgt gtttaaaggt ttgattccag 1620 cttttctgag tccttcggcc tccactcagg tcaggaccag aagtcgctgt tcctccctca 1680 gagactagaa ctttccaatg aataggagat tatcccaggt gcctgtgtcc aggctggcgt 1740 ctgggttctg tgcccccttc cccaccccag gtgtcctgtc cattctcagg atggtcacat 1800 gggcactgtt ggagtgtcgc aagagagata caaagtgtct gaattttctg actcttcccg 1860 tcagaacacc caaagacaca cgtgacccac catcccgtct ctgaccatga ggccaccctg 1920 aggtgctggg ccctgggctt ctaccctgcg gagatcacac tgacctggca gcgggatggc 1980 gaggaccaaa ctcaggacac cgagcttgtg gagaccaggc cagcaggaga tggaaccttc 2040 cagaagtggg cagctgtggt ggtgccttct ggagaagagc agagatacac gtgccatgtg 2100 cagcacgagg ggctgccaga gcccctcacc ctgagatggg gtaaggaggg ggatgagggg 2160 tcatgtgtct tctcagggaa agcagaagtc ctggagccct tcagccgggt cagggctgag 2220 gcttgggggt cagggcccct caccttcccc tcctttccca gggccatctt cccagcccac 2280 catccccatc gtgggcatcg ttgctggcct ggctgtcctg gctgtcctag ctgtcctagg 2340 agctgtgatg gctgttgtga tgtgtaggag gaagagctca ggtagggaag gggtgaggag 2400 tggggtctgg gttttcttgt cccactggga gtttcaagcc ccaggtagaa gtgtgcccca 2460 cctcgttact ggaagcacca tccacacatg ggccatccca gcctgggacc ctgtgtgcta 2520 gcacttactc tgttgtgaag cacatgacaa tgaaggacag atgtatcacc ttgatgatta 2580 tggtgttggg gtccttgatt ccagcattca tgagtcaggg gaaggtccct gctaaggaca 2640 gaccttagga gggcagttgc tccagaaccc acagctgctt tccccgtgtt tcctgatcct 2700 gccctgggtc tgcagtcata gttctggaaa cttctcttgg gtccaagact aggaggttcc 2760 cctaagatcg catggccctg cctcctccct gtcccctcac agggcatttt cttcccacag 2820 gtggaaaagg agggagctgc tctcaggctg cgtgtaagtg atggcggtgg gcgtgtggag 2880 gagctcaccc accccataat tcctcttgtc ccacatctcc tgcgggctct gaccaggtct 2940 ttttttttgt tctaccccag ccagcaacag tgcccagggc tctgatgagt ctctcatcgc 3000 ttgtaaaggt gagattctgg ggagctgaag tggtcggggg tggggcagag ggaaaaggcc 3060 taggtaatgg ggatcctttg attgggacgt ttcgaatgtg tggtgagctg ttcagagtgt 3120 catcacttac catgactgac ctgaatttgt tcatgactat tgtgttctgt agcctgagac 3180 agctgcctgt gtgggactga gatgcaggat ttcttcacac ctttcctttg tgacttcaag 3240 agcctctggc atctctttct gcaaaggcat ctgaatgtgt ctgcgttcct gttagcataa 3300 tgtgaggagg tggagagaca gcccaccccc gtgtccaccg tgacccct 3348 //