Dbfetch
ID LN600118; SV 1; linear; genomic DNA; STD; HUM; 2064 BP. XX AC LN600118; XX DT 15-SEP-2014 (Rel. 122, Created) DT 15-SEP-2014 (Rel. 122, Last updated, Version 1) XX DE Homo sapiens partial HLA-A gene for HLA class I antigen, allele HLA-A*01, DE isolate DKMS-LSL-A-267, exons 1-5 XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-2064 RA Albrecht V.; RT ; RL Submitted (20-AUG-2014) to the INSDC. RL Albrecht V., Research and Development, DKMS LIFE SCIENCE LAB, Fiedler Str. RL 34, Saxony, 01307 Dresden, GERMANY. XX RN [2] RX DOI; https://doi.org/10.1111/tan.13057. RX PUBMED; 28547825. RA Albrecht V., Zweiniger C., Surendranath V., Lang K., Schofl G., Dahl A., RA Winkler S., Lange V., Bohme I., Schmidt A.H.; RT "Dual redundant sequencing strategy: Full-length gene characterisation of RT 1056 novel and confirmatory HLA alleles"; RL HLA. -:1-9(2017). XX DR MD5; 6ef1088286be1eefb35a3e3bbfa2fff5. DR IMGT/HLA; HLA-A*01:167; HLA12725. XX FH Key Location/Qualifiers FH FT source 1..2064 FT /organism="Homo sapiens" FT /chromosome="6" FT /isolate="DKMS-LSL-A-267" FT /mol_type="genomic DNA" FT /cell_type="mouth mucosa cells" FT /db_xref="taxon:9606" FT CDS join(1..73,204..473,715..990,1570..1845,1948..>2064) FT /gene="HLA-A" FT /allele="HLA-A*01" FT /product="HLA class I antigen" FT /db_xref="GOA:A0A090KKK5" FT /db_xref="InterPro:IPR001039" FT /db_xref="InterPro:IPR003006" FT /db_xref="InterPro:IPR003597" FT /db_xref="InterPro:IPR007110" FT /db_xref="InterPro:IPR011161" FT /db_xref="InterPro:IPR011162" FT /db_xref="InterPro:IPR013783" FT /db_xref="InterPro:IPR036179" FT /db_xref="InterPro:IPR037055" FT /db_xref="UniProtKB/TrEMBL:A0A090KKK5" FT /protein_id="CEF48108.1" FT /translation="MAVMAPRTLLLLLSGALALTQTWAGSHSMRYFFTSVSRPGRGEPR FT FIAVGYVDDTQFVRFDSDAASQKMEPRAPWIEQEGPEYWDQETRNMKAHSQTDRANLGT FT LRGYYNQSEDGSHTIQIMYGCDVGPDGRFLRGYRQDAYDGKDYIALNEDLRSWTAADMA FT AQITKRKWEAVHAAEQRRVYLEGRCVDGFRRYLENGKETLQRTDPPKTHMTHHPISDHE FT ATLRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRY FT TCHVQHEGLPKPLTLRWELSSQPTIPIVGIIAGLVLLGAVITGAVVAAVMWRRKSS" FT exon 1..73 FT /gene="HLA-A" FT /allele="HLA-A*01" FT /number=1 FT intron 74..203 FT /gene="HLA-A" FT /allele="HLA-A*01" FT /number=1 FT exon 204..473 FT /gene="HLA-A" FT /allele="HLA-A*01" FT /number=2 FT intron 474..714 FT /gene="HLA-A" FT /allele="HLA-A*01" FT /number=2 FT exon 715..990 FT /gene="HLA-A" FT /allele="HLA-A*01" FT /number=3 FT intron 991..1569 FT /gene="HLA-A" FT /allele="HLA-A*01" FT /number=3 FT exon 1570..1845 FT /gene="HLA-A" FT /allele="HLA-A*01" FT /number=4 FT intron 1846..1947 FT /gene="HLA-A" FT /allele="HLA-A*01" FT /number=4 FT exon 1948..2064 FT /gene="HLA-A" FT /allele="HLA-A*01" FT /number=5 XX SQ Sequence 2064 BP; 382 A; 632 C; 675 G; 375 T; 0 other; atggccgtca tggcgccccg aaccctcctc ctgctactct cgggggccct ggccctgacc 60 cagacctggg cgggtgagtg cggggtcggg agggaaaccg cctctgcggg gagaagcaag 120 gggccctcct ggcgggggcg caggaccggg ggagccgcgc cgggaggagg gtcgggcagg 180 tctcagccac tgctcgcccc caggctccca ctccatgagg tatttcttca catccgtgtc 240 ccggcccggc cgcggggagc cccgcttcat cgccgtgggc tacgtggacg acacgcagtt 300 cgtgcggttc gacagcgacg ccgcgagcca gaagatggag ccgcgggcgc cgtggataga 360 gcaggagggg ccggagtatt gggaccagga gacacggaat atgaaggccc actcacagac 420 tgaccgagcg aacctgggga ccctgcgcgg ctactacaac cagagcgagg acggtgagtg 480 accccggccc ggggcgcagg tcacgacccc tcatccccca cggacgggcc aggtcgccca 540 cagtctccgg gtccgagatc caccccgaag ccgcgggact ccgagaccct tgtcccggga 600 gaggcccagg cgcctttacc cggtttcatt ttcagtttag gccaaaaatc cccccgggtt 660 ggtcggggcg gggcggggct cgggggactg ggctgaccgc ggggtcgggg ccaggttctc 720 acaccatcca gataatgtat ggctgcgacg tggggccgga cgggcgcttc ctccgcgggt 780 accggcagga cgcctacgac ggcaaggatt acatcgccct gaacgaggac ctgcgctctt 840 ggaccgcggc ggacatggca gctcagatca ccaagcgcaa gtgggaggcg gtccatgcgg 900 cggagcagcg gagagtctac ctggagggcc ggtgcgtgga cgggttccgc agatacctgg 960 agaacgggaa ggagacgctg cagcgcacgg gtaccagggg ccacggggcg cctccctgat 1020 cgcctataga tctcccgggc tggcctccca caaggagggg agacaattgg gaccaacact 1080 agaatatcac cctccctctg gtcctgaggg agaggaatcc tcctgggttt ccagatcctg 1140 taccagagag tgactctgag gttccgccct gctctctgac acaattaagg gataaaatct 1200 ctgaaggagt gacgggaaga cgatccctcg aatactgatg agtggttccc tttgacaccg 1260 gcagcagcct tgggcccgtg acttttcctc tcaggccttg ttctctgctt cacactcaat 1320 gtgtgtgggg gtctgagtcc agcacttctg agtctctcag cctccactca ggtcaggacc 1380 agaagtcgct gttcccttct cagggaatag aagattatcc caggtgcctg tgtccaggct 1440 ggtgtctggg ttctgtgctc tcttccccat cccgggtgtc ctgtccattc tcaagatggc 1500 cacatgcgtg ctggtggagt gtcccatgac agatgcaaaa tgcctgaatt ttctgactct 1560 tcccgtcaga cccccccaag acacatatga cccaccaccc catctctgac catgaggcca 1620 ccctgaggtg ctgggccctg ggcttctacc ctgcggagat cacactgacc tggcagcggg 1680 atggggagga ccagacccag gacacggagc tcgtggagac caggcctgca ggggatggaa 1740 ccttccagaa gtgggcggct gtggtggtgc cttctggaga ggagcagaga tacacctgcc 1800 atgtgcagca tgagggtctg cccaagcccc tcaccctgag atggggtaag gagggagatg 1860 ggggtgtcat gtctcttagg gaaagcagga gcctctctgg agacctttag cagggtcagg 1920 gcccctcacc ttcccctctt ttcccagagc tgtcttccca gcccaccatc cccatcgtgg 1980 gcatcattgc tggcctggtt ctccttggag ctgtgatcac tggagctgtg gtcgctgccg 2040 tgatgtggag gaggaagagc tcag 2064 //