Dbfetch
ID LN600099; SV 2; linear; genomic DNA; STD; HUM; 3321 BP. XX AC LN600099; XX DT 15-SEP-2014 (Rel. 122, Created) DT 21-JUL-2017 (Rel. 133, Last updated, Version 2) XX DE Homo sapiens, HLA-B pseudogene, cell line DKMS-LSL-B-243, null allele DE HLA-B*18:138N XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RC revised by [3] RA Albrecht V.; RT ; RL Submitted (20-AUG-2014) to the INSDC. RL Albrecht V., Research and Development, DKMS LIFE SCIENCE LAB, Fiedler Str. RL 34, Saxony, 01307 Dresden, GERMANY. XX RN [2] RX DOI; https://doi.org/10.1111/tan.13057. RX PUBMED; 28547825. RA Albrecht V., Zweiniger C., Surendranath V., Lang K., Schofl G., Dahl A., RA Winkler S., Lange V., Bohme I., Schmidt A.H.; RT "Dual redundant sequencing strategy: Full-length gene characterisation of RT 1056 novel and confirmatory HLA alleles"; RL HLA. -:1-9(2017). XX RN [3] RP 1-3321 RA Albrecht V.; RT ; RL Submitted (21-JUL-2017) to the INSDC. RL Albrecht V., Research and Development, DKMS LIFE SCIENCE LAB, Fiedler Str. RL 34, Saxony, 01307 Dresden, GERMANY. XX DR MD5; 3778d15442a65444ad7262fb35af8e0c. XX FH Key Location/Qualifiers FH FT source 1..3321 FT /organism="Homo sapiens" FT /mol_type="genomic DNA" FT /cell_line="DKMS-LSL-B-243" FT /db_xref="taxon:9606" FT exon 1..357 FT /gene="HLA-B" FT /allele="HLA-B*18:138N" FT /number=1 FT CDS join(285..357,486..755,1002..1275,1848..2123,2228..2344, FT 2786..2818,2925..2968) FT /codon_start=1 FT /gene="HLA-B" FT /allele="HLA-B*18:138N" FT /note="MHC class I antigen null allele" FT /pseudogene="allelic" FT intron 358..485 FT /gene="HLA-B" FT /allele="HLA-B*18:138N" FT /number=1 FT exon 486..755 FT /gene="HLA-B" FT /allele="HLA-B*18:138N" FT /number=2 FT intron 756..1001 FT /gene="HLA-B" FT /allele="HLA-B*18:138N" FT /number=2 FT exon 1002..1275 FT /gene="HLA-B" FT /allele="HLA-B*18:138N" FT /number=3 FT intron 1276..1847 FT /gene="HLA-B" FT /allele="HLA-B*18:138N" FT /number=3 FT exon 1848..2123 FT /gene="HLA-B" FT /allele="HLA-B*18:138N" FT /number=4 FT intron 2124..2227 FT /gene="HLA-B" FT /allele="HLA-B*18:138N" FT /number=4 FT exon 2228..2344 FT /gene="HLA-B" FT /allele="HLA-B*18:138N" FT /number=5 FT intron 2345..2785 FT /gene="HLA-B" FT /allele="HLA-B*18:138N" FT /number=5 FT exon 2786..2818 FT /gene="HLA-B" FT /allele="HLA-B*18:138N" FT /number=6 FT intron 2819..2924 FT /gene="HLA-B" FT /allele="HLA-B*18:138N" FT /number=6 FT exon 2925..3321 FT /gene="HLA-B" FT /allele="HLA-B*18:138N" FT /number=7 XX SQ Sequence 3321 BP; 618 A; 977 C; 1041 G; 685 T; 0 other; gatcaggacg aagtcccagg ccccgggcgg ggctctcagg gtctcaggct ccgagagcct 60 tgtctgcatt ggggaggcgc agcattgggg attccccact cccacgagtt tcacttcttc 120 tcccaaccta tgtcgggtcc ttcttccagg atactcgtga cgcgtcccca tttcccactc 180 ccattgggtg tcgggtgtct agagaagcca atcagtgtcg ccggggtccc agttctaaag 240 tccccacgca cccacccgga ctcagaatct cctcagacgc cgagatgcgg gtcacggcgc 300 cccgaaccct cctcctgctg ctctgggggg cagtggccct gaccgagacc tgggctggtg 360 agtgcggggt cggcagggaa atggcctctg tggggaggag cgaggggacc gcaggcgggg 420 gcgcaggacc cggggagccg cgccgggagg agggtcgggc gggtctcagc ccctccttgc 480 cccaggctcc cactccatga ggtatttcca cacctccgtg tcccggcccg gccgcgggga 540 gccccgcttc atctcagtgg gctacgtgga cggcacccag ttcgtgaggt tcgacagcga 600 cgccgcgagt ccgaggacgg agccccgggc gccgtggata gagcaagagg ggccggagta 660 ttgggaccgg aacacacaga tctccaagac caacacacag acttaccgag agagcctgcg 720 gaacctgcgc ggctactaca accagagcga ggccggtgag tgaccccggc ccggggcgca 780 ggtcacgact ccccatcccc cacgtacggc ccgggtcgcc ccgagtctcc gggtccgaga 840 tccgcccccc tgaggccgcg ggacccgccc agaccctcga ccggcgagag ccccaggcgc 900 gtttacccgg tttcattttc agttgaggcc aaaatccccg cgggttggtc ggggcggggc 960 ggggctcggg gggacggggc tgaccgcggg gccggggcca gggtctcaca ccctccagag 1020 gatgtacggc tgcgacgtgg ggccggacgg gcgcctcctc cgcgggcatg accagtccgc 1080 ctacgacggc aaggattaca tcgccctgaa cgaggacctg aacgaggacc gcggcggaca 1140 ccgcggctca gatcacccag cgcaagtggg aggcggcccg tgtggcggag cagctgagag 1200 cctacctgga gggcacgtgc gtggagtggc tccgcagaca cctggagaac gggaaggaga 1260 cgctgcagcg cgcgggtacc aggggcagtg gggagccttc cccatctcct ataggtcgcc 1320 ggggatggcc tcccacgaga agaggaggaa aatgggatca gcgctagaat gtcgccctcc 1380 cttgaatgga gaatggcatg agttttcccg agtttcctct gagggccccc tcttctctct 1440 aggacaatta agggatgacg tctctgagga aatggagggg aagacagtcc ctagaatact 1500 gatcaggggt cccctttgac ccctgcagca gccttgggaa ccatgacttt tcctctcagg 1560 ccttgttctc tgcctcacac tcagtgtgtt tggggctctg attccagcac ttctgagtca 1620 ctttacctcc actcagatca ggagcagaag tctctgttcc ccgctcagag actcgaactt 1680 tccaatgaat agattatccc aggtgcctgc gtccaggctg gtgtctgggt tctgtgcccc 1740 ttccccaccc caggtgtcct gtccattctc aggctggtca catgggtggt cctagggtgt 1800 cccatgagag atgcaaagcg cctgaatttt ctgactcttc ccatcagacc ccccaaagac 1860 acatgtgacc caccacccca tctctgacca tgaggccacc ctgaggtgct gggccctggg 1920 cttctaccct gcggagatca cactgacctg gcagcgggat ggcgaggacc aaactcagga 1980 caccgagctt gtggagacca gaccagcagg agatagaacc ttccagaagt gggcagctgt 2040 ggtggtgcct tctggagaag agcagagata cacatgccat gtacagcatg aggggctgcc 2100 gaagcccctc accctgagat ggggtaagga gggggatgag gggtcatatc tcttctcagg 2160 gaaagcagga gcccttctgg agcccttcag cagggtcagg gcccctcatc ttcccctcct 2220 ttcccagagc catcttccca gtccaccatc cccatcgtgg gcattgttgc tggcctggct 2280 gtcctagcag ttgtggtcat cggagctgtg gtcgctactg tgatgtgtag gaggaagagc 2340 tcaggtaggg aaggggtgag gggtggggtc tgggttttct tgtcccactg ggggtttcaa 2400 gccccaggta gaagtgttcc ctgcctcatt actgggaagc agcatccaca caggggctaa 2460 cgcagcctgg gaccctgtgt gccagcactt actcttttgt gcagcacatg tgacaatgaa 2520 ggacggatgt atcaccttga tggttgtggt gttggggtcc tgattccagc attcatgagt 2580 caggggaagg tccctgctaa ggacagacct taggagggca gttggtccag gacccacact 2640 tgctttcctc gtgtttcctg atcctgcctt gggtctgtag tcatacttct ggaaattcct 2700 tttggttcca agacgaggag gttcctctaa gatctcatgg ccctgcttcc tcccagtccc 2760 ctcacaggac attttcttcc cacaggtgga aaaggaggga gctactctca ggctgcgtgt 2820 aagtggtggg ggtgggagtg tggaggagct cacccacccc ataattcctc ctgtcccacg 2880 tctcctgcgg gctctgacca ggtcctgttt ttgttctact ccagccagcg acagtgccca 2940 gggctctgat gtgtctctca cagcttgaaa aggtgagatt cttggggtct agagtgggcg 3000 ggggggcggg gagggggcag aggggaaagg cctgggtaat ggagattctt tgattgggat 3060 gtttcgcgtg tgtggtgggc tgttcagagt gtcatcactt accatgacta accagaattt 3120 gttcatgact gttgttttct gtagcctgag acagctgtct tgtgagggac cgagatgcag 3180 gatttcttca cgcctcccct ttgtgacttc aagagcctct ggcatctctt tctgcaaagg 3240 cacctgaatg tgtctgcgtc cctgttagca taatgtgagg aggtggagag acagcccacc 3300 cccgtgtcca ccgtgacccc t 3321 //