Dbfetch
ID LN600055; SV 1; linear; genomic DNA; STD; HUM; 2700 BP. XX AC LN600055; XX DT 15-SEP-2014 (Rel. 122, Created) DT 15-SEP-2014 (Rel. 122, Last updated, Version 1) XX DE Homo sapiens partial HLA-A gene for HLA class I antigen, allele HLA-A*30, DE isolate DKMS-LSL-A-212, exons 2-8 XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-2700 RA Albrecht V.; RT ; RL Submitted (19-AUG-2014) to the INSDC. RL Albrecht V., Research and Development, DKMS LIFE SCIENCE LAB, Fiedler Str. RL 34, Saxony, 01307 Dresden, GERMANY. XX RN [2] RX DOI; https://doi.org/10.1111/tan.13057. RX PUBMED; 28547825. RA Albrecht V., Zweiniger C., Surendranath V., Lang K., Schofl G., Dahl A., RA Winkler S., Lange V., Bohme I., Schmidt A.H.; RT "Dual redundant sequencing strategy: Full-length gene characterisation of RT 1056 novel and confirmatory HLA alleles"; RL HLA. -:1-9(2017). XX DR MD5; f69930dbbead867f85cb5d451373fc77. DR IMGT/HLA; HLA-A*30:93; HLA12693. XX FH Key Location/Qualifiers FH FT source 1..2700 FT /organism="Homo sapiens" FT /chromosome="6" FT /isolate="DKMS-LSL-A-212" FT /mol_type="genomic DNA" FT /cell_type="mouth mucosa cells" FT /db_xref="taxon:9606" FT CDS join(<1..270,512..787,1367..1642,1745..1861,2304..2336, FT 2479..2526,2696..2700) FT /codon_start=3 FT /gene="HLA-A" FT /allele="HLA-A*30" FT /product="HLA class I antigen" FT /db_xref="GOA:A0A090KKC3" FT /db_xref="InterPro:IPR001039" FT /db_xref="InterPro:IPR003006" FT /db_xref="InterPro:IPR003597" FT /db_xref="InterPro:IPR007110" FT /db_xref="InterPro:IPR010579" FT /db_xref="InterPro:IPR011161" FT /db_xref="InterPro:IPR011162" FT /db_xref="InterPro:IPR013783" FT /db_xref="InterPro:IPR036179" FT /db_xref="InterPro:IPR037055" FT /db_xref="UniProtKB/TrEMBL:A0A090KKC3" FT /protein_id="CEF48045.1" FT /translation="SHSMRYFSTSVSRPGSGEPRFIAVGYVDDTQFVRFDSDAASQRME FT PRAPWIEQERPEYWDQETRNVKAQSQTDRVDLGTLRGYYNQSEAGSHTIQIMYGCDVGS FT DGRFLRGYQQHAYDGKDYIALNEDLRSWTAADMAAQITQRKWEAARWAEQLRAYLEGTC FT VEWLRRYLENGKETLQRTDPPKTHMTHHPISDHEATLRCWALGFYPAEITLTWQRDGED FT QTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRYTCHVQHEGLPKPLTLRWELSSQPTI FT PIVGIIAGLVLLGAVITGAVVAAVMWRRKSSDRKGGSYTQAASSDSAQGSDVSLTACKV FT " FT exon 1..270 FT /gene="HLA-A" FT /allele="HLA-A*30" FT /number=2 FT intron 271..511 FT /gene="HLA-A" FT /allele="HLA-A*30" FT /number=2 FT exon 512..787 FT /gene="HLA-A" FT /allele="HLA-A*30" FT /number=3 FT intron 788..1366 FT /gene="HLA-A" FT /allele="HLA-A*30" FT /number=3 FT exon 1367..1642 FT /gene="HLA-A" FT /allele="HLA-A*30" FT /number=4 FT intron 1643..1744 FT /gene="HLA-A" FT /allele="HLA-A*30" FT /number=4 FT exon 1745..1861 FT /gene="HLA-A" FT /allele="HLA-A*30" FT /number=5 FT intron 1862..2303 FT /gene="HLA-A" FT /allele="HLA-A*30" FT /number=5 FT exon 2304..2336 FT /gene="HLA-A" FT /allele="HLA-A*30" FT /number=6 FT intron 2337..2478 FT /gene="HLA-A" FT /allele="HLA-A*30" FT /number=6 FT exon 2479..2526 FT /gene="HLA-A" FT /allele="HLA-A*30" FT /number=7 FT intron 2527..2695 FT /gene="HLA-A" FT /allele="HLA-A*30" FT /number=7 FT exon 2696..2700 FT /gene="HLA-A" FT /allele="HLA-A*30" FT /number=8 XX SQ Sequence 2700 BP; 535 A; 754 C; 823 G; 588 T; 0 other; gctcccactc catgaggtat ttctccacat ccgtgtcccg gcccggcagt ggagagcccc 60 gcttcatcgc agtgggctac gtggacgaca cgcagttcgt gcggttcgac agcgacgccg 120 cgagccagag gatggagccg cgggcgccgt ggatagagca ggagaggcct gagtattggg 180 accaggagac acggaatgtg aaggcccagt cacagactga ccgagtggac ctggggaccc 240 tgcgcggcta ctacaaccag agcgaggccg gtgagtgacc ccggccgggg gcgcaggtca 300 cgacccctca tcccccacgg acgggccagg tcgcccacag tctccgggtc cgagatccac 360 cccgaagccg cgggaccccg agacccttga cccgggagag gcccaggcgc ctttacccgg 420 tttcattttc agtttaggcc aaaaattccc ccgggttggt cggggctggg cggggctcgg 480 gggactgggc tgaccgcggg gtcggggcca ggttctcaca ccatccagat aatgtatggc 540 tgcgacgtgg ggtcggacgg gcgcttcctc cgcgggtatc aacagcacgc ctacgacggc 600 aaggattaca tcgccctgaa cgaggacctg cgctcttgga ccgcggcgga catggcggct 660 cagatcaccc agcgcaagtg ggaggcggcc cgttgggcgg agcagttgag agcctacctg 720 gagggcacgt gcgtggagtg gctccgcaga tacctggaga acgggaagga gacgctgcag 780 cgcacgggta ccaggggcca cggggcgcct tcctgatcgc ctgtagatct cccgggctgg 840 cctcccacaa ggaggggaga caattgggac caacactaga atatcaccct ccctctggtc 900 ctgagggaga ggaatcctcc tgggtttcca gatcctgtac cagagagtga ctctgaggtt 960 ccgccctgct ctctgacaca attaagggat aaaatctctg aaggagtgac gggaagacga 1020 tccctcgaat actgatgagt ggttcccttt gacaccggca gcagccttgg gcccgtgact 1080 tttcctctca ggccttgttc tctgcttcac actcaatgtg tgtgggggtc tgagtccagc 1140 acttctgagt ccctcagcct ccactcaggt caggaccaga agtcgctgtt cccttctcag 1200 ggaatagaag attatcccag gtgcctgtgt ccaggctggt gtctgggttc tgtgctctct 1260 tccccatccc gggtgtcctg tccattctca agatggccac atgcgtgctg gtggagtgtc 1320 ccatgacaga tgcaaaatgc ctgaattttc tgactcttcc cgtcagaccc ccccaagaca 1380 catatgaccc accaccccat ctctgaccat gaggccaccc tgaggtgctg ggccctgggc 1440 ttctaccctg cggagatcac actgacctgg cagcgggatg gggaggacca gacccaggac 1500 acggagctcg tggagaccag gcctgcaggg gatggaacct tccagaagtg ggcggctgtg 1560 gtggtgcctt ctggagagga gcagagatac acctgccatg tgcagcatga gggtctgccc 1620 aagcccctca ccctgagatg gggtaaggag ggagatgggg gtgtcatgtc tcttagggaa 1680 agcaggagcc tctctggaga cctttagcag ggtcagggcc cctcaccttc ccctcttttc 1740 ccagagctgt cttcccagcc caccatcccc atcgtgggca tcattgctgg cctggttctc 1800 cttggagctg tgatcactgg agctgtggtc gctgccgtga tgtggaggag gaagagctca 1860 ggtggagaag gggtgaaggg tggggtctga gatttcttgt ctcactgagg gttccaagcc 1920 ccagctagaa atgtgccctg tctcattact gggaagcacc atccacaatc atgggcctac 1980 ccagcctggg ccctgtgtgc cagcacttac tcttttgtaa agcacctgtt aaaatgaagg 2040 acagatttat caccttgatt acggcggtga tgggacctga tcccagcagt cacaagtcac 2100 aggggaaggt ccctgaggac agacctcagg agggctattg gtccaggacc cacacctgct 2160 ttcttcatgt ttcctgatcc cgccctgggt ctgcagtcac acatttctgg aaacttctct 2220 ggggtccaag actaggaggt tcctctagga ccttaaggcc ctggctcctt tctggtatct 2280 cacaggacat tttcttctca cagatagaaa aggagggagt tacactcagg ctgcaagtaa 2340 gtatgaagga ggctgatgcc tgaggtcctt gggatattgt gtttgggagc ccatggggga 2400 gctcacccac cccacaattc ctcctctagc cacatcttct gtgggatctg accaggttct 2460 gtttttgttc taccccaggc agtgacagtg cccagggctc tgatgtgtct ctcacagctt 2520 gtaaaggtga gagcttggag gacctaatgt gtgttgggtg ttgggcggaa cagtggacac 2580 agctgtgcta tggggtttct ttgcattgga tgtattgagc atgcgatggg ctgtttaagg 2640 tgtgacccct cactgtgatg gatatgaatt tgttcatgaa tatttttttc tatagtgtga 2700 //