Dbfetch
ID LM654025; SV 1; linear; genomic DNA; STD; HUM; 1022 BP. XX AC LM654025; XX DT 30-JUL-2014 (Rel. 121, Created) DT 30-JUL-2014 (Rel. 121, Last updated, Version 1) XX DE Homo sapiens partial HLA-A gene for MHC class I antigen, allele DE HLA-A*26new, exons 2-4 XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-1022 RA Rowlands J.; RT ; RL Submitted (21-JUL-2014) to the INSDC. RL Rowlands J., Welsh, Welsh Blood Service, Transplantation and Immunogenetics RL Labor, Ely Valley Road, Pontyclun, CF72 9WB, UNITED KINGDOM. XX RN [2] RA Climer T., Street J., Darke C.; RT "A novel HLA-A allele, A*26new"; RL Unpublished. XX DR MD5; 47daf3902e7a24ac383c894e55dca777. DR IMGT/HLA; HLA-A*26:103; HLA11987. XX FH Key Location/Qualifiers FH FT source 1..1022 FT /organism="Homo sapiens" FT /chromosome="6" FT /isolate="14509547" FT /mol_type="genomic DNA" FT /cell_type="mixed leucocytes" FT /tissue_type="peripheral blood" FT /PCR_primers="fwd_name: A.I1.210, fwd_seq: FT acccgggaagccgcgcct, rev_name: A.I4.2177gCT, rev_seq: FT gcccaggctgggtaggct" FT /db_xref="taxon:9606" FT CDS join(<1..270,371..646,747..>1022) FT /codon_start=3 FT /gene="HLA-A" FT /allele="HLA-A*26new" FT /product="MHC class I antigen" FT /function="antigen presentating molecule" FT /db_xref="InterPro:IPR001039" FT /db_xref="InterPro:IPR003006" FT /db_xref="InterPro:IPR003597" FT /db_xref="InterPro:IPR007110" FT /db_xref="InterPro:IPR011161" FT /db_xref="InterPro:IPR011162" FT /db_xref="InterPro:IPR013783" FT /db_xref="InterPro:IPR036179" FT /db_xref="InterPro:IPR037055" FT /db_xref="UniProtKB/TrEMBL:A0A078BSN2" FT /protein_id="CDX10190.1" FT /translation="SHSMRYFYTSVSRPGRGEPRFIAVGYVDDTQFVRFDSDAASQRME FT PRAPWIEQEGPEYWDRNTRNVKAHSQTDRANLGTLRGYYNQSEDGSHTIQRMYGCDVGP FT DGRFLRGYQQDAYDGKDYIALNEDLRSWTAADMAAQITQRKWETAHEAEQWRAYLEGGC FT VEWLRRYLENGKETLQRTDAPKTHMTHHAVSDHEATLRCWALSFYPAEITLTWQRDGED FT QTQDTELVETRPAGDGTFQKWASVVVPSGQEQRYTCHVQHEGLPKPLTLRW" FT mRNA join(1..270,371..646,747..1022) FT /gene="HLA-A" FT /allele="HLA-A*26new" FT exon 1..270 FT /gene="HLA-A" FT /allele="HLA-A*26new" FT /number=2 FT gap 271..370 FT /estimated_length=unknown FT intron 271..370 FT /gene="HLA-A" FT /allele="HLA-A*26new" FT /number=2 FT exon 371..646 FT /gene="HLA-A" FT /allele="HLA-A*26new" FT /number=3 FT gap 647..746 FT /estimated_length=unknown FT intron 647..746 FT /gene="HLA-A" FT /allele="HLA-A*26new" FT /number=3 FT exon 747..1022 FT /gene="HLA-A" FT /allele="HLA-A*26new" FT /number=4 XX SQ Sequence 1022 BP; 167 A; 248 C; 288 G; 119 T; 200 other; gctcccactc catgaggtat ttctacacct ccgtgtcccg gcccggccgc ggggagcccc 60 gcttcatcgc cgtgggctac gtggacgaca cgcagttcgt gcggttcgac agcgacgccg 120 cgagccagag gatggagccg cgggcgccgt ggatagagca ggaggggccg gagtattggg 180 accggaacac acggaatgtg aaggcccact cacagactga ccgagcgaac ctggggaccc 240 tgcgcggcta ctacaaccag agcgaggacg nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 300 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 360 nnnnnnnnnn gttctcacac catccagagg atgtatggct gcgacgtggg gccggacggg 420 cgcttcctcc gcgggtacca gcaggacgct tacgacggca aggattacat cgccctgaac 480 gaggacctgc gctcttggac cgcggcggac atggcggctc agatcaccca gcgcaagtgg 540 gagacggccc atgaggcgga gcagtggaga gcctacctgg agggcgggtg cgtggagtgg 600 ctccgcagat acctggagaa cgggaaggag acgctgcagc gcacggnnnn nnnnnnnnnn 660 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 720 nnnnnnnnnn nnnnnnnnnn nnnnnnacgc ccccaagacg catatgactc accacgctgt 780 ctctgaccat gaggccaccc tgaggtgctg ggccctgagc ttctaccctg cggagatcac 840 actgacctgg cagcgggatg gggaggacca gacccaggac acggagctcg tggagaccag 900 gcctgcaggg gatgggacct tccagaagtg ggcgtctgtg gtggtgcctt ctggacagga 960 gcagagatac acctgccatg tgcagcatga gggtctgccc aagcccctca ccctgagatg 1020 gg 1022 //