Dbfetch
ID LK022019; SV 1; linear; genomic DNA; STD; HUM; 2714 BP. XX AC LK022019; XX DT 19-MAY-2014 (Rel. 120, Created) DT 19-MAY-2014 (Rel. 120, Last updated, Version 1) XX DE Homo sapiens partial HLA-A gene for MHC class I antigen, isolate DE DKMS-LSL-A-133, allele HLA-A*68, exons 2-8 XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-2714 RA Albrecht V.; RT ; RL Submitted (05-MAY-2014) to the INSDC. RL Albrecht V., Research and Development, DKMS LIFE SCIENCE LAB, Fiedler Str. RL 34, Saxony, 01307 Dresden, GERMANY. XX RN [2] RX DOI; https://doi.org/10.1111/tan.13057. RX PUBMED; 28547825. RA Albrecht V., Zweiniger C., Surendranath V., Lang K., Schofl G., Dahl A., RA Winkler S., Lange V., Bohme I., Schmidt A.H.; RT "Dual redundant sequencing strategy: Full-length gene characterisation of RT 1056 novel and confirmatory HLA alleles"; RL HLA. -:1-9(2017). XX DR MD5; 4067961fba542ed2c6fd15fce8803aeb. DR IMGT/HLA; HLA-A*68:103:02; HLA12080. XX FH Key Location/Qualifiers FH FT source 1..2714 FT /organism="Homo sapiens" FT /chromosome="6" FT /isolate="DKMS-LSL-A-133" FT /mol_type="genomic DNA" FT /cell_type="blood cells" FT /db_xref="taxon:9606" FT CDS join(<1..270,512..787,1388..1663,1763..1879,2318..2350, FT 2493..2540,2710..2714) FT /codon_start=3 FT /gene="HLA-A" FT /allele="HLA-A*68" FT /product="MHC class I antigen" FT /db_xref="GOA:A0A060VHJ3" FT /db_xref="InterPro:IPR001039" FT /db_xref="InterPro:IPR003006" FT /db_xref="InterPro:IPR003597" FT /db_xref="InterPro:IPR007110" FT /db_xref="InterPro:IPR010579" FT /db_xref="InterPro:IPR011161" FT /db_xref="InterPro:IPR011162" FT /db_xref="InterPro:IPR013783" FT /db_xref="InterPro:IPR036179" FT /db_xref="InterPro:IPR037055" FT /db_xref="UniProtKB/TrEMBL:A0A060VHJ3" FT /protein_id="CDQ51700.1" FT /translation="SHSMRYFYTSVSRPGRGEPRFIAVGYVDDTQFVRFDSDAASQRME FT PRAPWIEQEGPEYWDRNTRNVKAQSQTDRVDLGTLRGYYNQSEAGSHTIQIMYGCDVGS FT DGRFLRGYRQDAYDGKDYIALKEDLRSWTAADMAAQTTKHKWEAAHVAEQWRAYLEGTC FT VEWLRRYLENGKETLQRTDAPKTHMTHHAVSDHEATLRCWALSFYPAEITLTWQRDGED FT QTQDTELVETRPAGDGTFQKWVAVVVPSGQEQRYTCHVQHEGLPKPLTLRWEPSSQPTI FT PIVGIIAGLVLFGAVITGAVVAAVMWRRKSSDRKGGSYSQAASSDSAQGSDVSLTACKV FT " FT exon 1..270 FT /gene="HLA-A" FT /allele="HLA-A*68" FT /number=2 FT intron 271..511 FT /gene="HLA-A" FT /allele="HLA-A*68" FT /number=2 FT exon 512..787 FT /gene="HLA-A" FT /allele="HLA-A*68" FT /number=3 FT intron 788..1387 FT /gene="HLA-A" FT /allele="HLA-A*68" FT /number=3 FT exon 1388..1663 FT /gene="HLA-A" FT /allele="HLA-A*68" FT /number=4 FT intron 1664..1762 FT /gene="HLA-A" FT /allele="HLA-A*68" FT /number=4 FT exon 1763..1879 FT /gene="HLA-A" FT /allele="HLA-A*68" FT /number=5 FT intron 1880..2317 FT /gene="HLA-A" FT /allele="HLA-A*68" FT /number=5 FT exon 2318..2350 FT /gene="HLA-A" FT /allele="HLA-A*68" FT /number=6 FT intron 2351..2492 FT /gene="HLA-A" FT /allele="HLA-A*68" FT /number=6 FT exon 2493..2540 FT /gene="HLA-A" FT /allele="HLA-A*68" FT /number=7 FT intron 2541..2709 FT /gene="HLA-A" FT /allele="HLA-A*68" FT /number=7 FT exon 2710..2714 FT /gene="HLA-A" FT /allele="HLA-A*68" FT /number=8 XX SQ Sequence 2714 BP; 541 A; 764 C; 825 G; 584 T; 0 other; gctcccactc catgaggtat ttctacactt ccgtgtcccg gcccggccgc ggggagcccc 60 gcttcatcgc cgtgggctac gtggacgaca cgcagttcgt gcggttcgac agcgacgccg 120 cgagccagag gatggagccg cgggcgccgt ggatagagca ggaggggccg gagtattggg 180 accggaacac acggaatgtg aaggcccagt cacagactga ccgagtggac ctggggaccc 240 tgcgcggcta ctacaaccag agcgaggccg gtgagtgacc ccggcccggg gcgcaggtca 300 cgacccctca tcccccacgg acgggccagg tcgcccacag tctccgggtc cgagatccgc 360 cccgaagccg cgggaccccg agacccttgc cccgggagag gcccaggcgc ctttacccgg 420 tttcattttc agtttaggcc aaaaatcccc ccgggttggt cggggcgggg cggggctcgg 480 gggaccgggc tgacctcggg gtccgggcca ggttctcaca ccatccagat aatgtatggc 540 tgcgacgtgg ggtcggacgg gcgcttcctc cgcgggtacc ggcaggacgc ctacgacggc 600 aaggattaca tcgccctgaa agaggacctg cgctcttgga ccgcggcgga catggcagct 660 cagaccacca agcacaagtg ggaggcggcc catgtggcgg agcagtggag agcctacctg 720 gagggcacgt gcgtggagtg gctccgcaga tacctggaga acgggaagga gacgctgcag 780 cgcacgggta ccaggggcca cggggcgcct ccctgatcgc ctgtagatct cccgggctgg 840 cctcccacaa ggaggggaga caattgggac caacactaga atatcgccct ccctctggtc 900 ctgagggaga ggaatcctcc tgggtttcca gatcctgtac cagagagtga ctctgaggtt 960 ccgccctgct ctctgacaca attaagggat aaaatctctg aaggaatgac gggaagacga 1020 tccctcgaat actgatgagt ggttcccttt gacacacaca ggcagcagcc ttgggcccgt 1080 gacttttcct ctcaggcctt gttctctgct tcacactcaa tgtgtgtggg ggtctgagtc 1140 cagcacttct gagtccctca gcctccactc aggtcaggac cagaagtcgc tgttccctct 1200 tcagggacta gaattttcca cggaatagga gattatccca ggtgcctgtg tccaggctgg 1260 tgtctgggtt ctgtgctccc ttccccatcc caggtgtcct gtccattctc aagatagcca 1320 catgtgtgct ggaggagtgt cccatgacag atgcaaaatg cctgaatgat ctgactcttc 1380 ctgacagacg cccccaaaac gcatatgact caccacgctg tctctgacca tgaagccacc 1440 ctgaggtgct gggccctgag cttctaccct gcggagatca cactgacctg gcagcgggat 1500 ggggaggacc agacccagga cacggagctc gtggagacca ggcctgcagg ggatggaacc 1560 ttccagaagt gggtggctgt ggtggtgcct tctggacagg agcagagata cacctgccat 1620 gtgcagcatg agggtttgcc caagcccctc accctgagat ggggtaagga gggagacggg 1680 ggtgtcatgt cttttaggga aagcaggagc ctctctgacc tttagcaggg tcagggcccc 1740 tcaccttccc ctcttttccc agagccgtct tcccagccca ccatccccat cgtgggcatc 1800 attgctggcc tggttctctt tggagctgtg atcactggag ctgtggtcgc tgctgtgatg 1860 tggaggagga agagctcagg tggggaaggg gtgaagggtg ggtctgagat ttcttgtctc 1920 actgagggtt ccaagaccca ggtagaagtg tgccctgcct cgttactggg aagcaccacc 1980 cacaattatg ggcctaccca gcctgggccc tgtgtgccag cacttactct tttgtaaagc 2040 acctgttaaa atgaaggaca gatttatcac cttgattaca gcggtgatgg gacctgatcc 2100 cagcagtcac aagtcacagg ggaaggtccc tgaggacctt caggagggcg gttggtccag 2160 gacccacacc tgctttcttc atgtttcctg atcccgccct gggtctgcag tcacacattt 2220 ctggaaactt ctctgaggtc caagacttgg aggttcctct aggaccttaa ggccctgact 2280 cctttctggt atctcacagg acattttctt cccacagata gaaaaggagg gagctactct 2340 caggctgcaa gtaagtatga aggaggctga tgcctgaggt ccttgggata ttgtgtttgg 2400 gagcccatgg gggagctcac ccaccccaca attcctcctc tagccacatc ttctgtggga 2460 tctgaccagg ttctgttttt gttctacccc aggcagtgac agtgcccagg gctctgatgt 2520 gtctctcaca gcttgtaaag gtgagagcct ggagggcctg atgtgtgttg ggtgttgggc 2580 agaacagtgg acacagctgt gctatggggt ttctttccat tggatgtatt gagcatgcga 2640 tgggctgttt aaagtgtgac ccctcactgt gacagatacg aatttgttca tgaatatttt 2700 tttctatagt gtga 2714 //