Dbfetch
ID LK021981; SV 1; linear; genomic DNA; STD; HUM; 3197 BP. XX AC LK021981; XX DT 19-MAY-2014 (Rel. 120, Created) DT 19-MAY-2014 (Rel. 120, Last updated, Version 1) XX DE Homo sapiens HLA-C gene for MHC class I antigen, isolate DKMS-LSL-C-155, DE allele HLA-C*17:03 XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-3197 RA Albrecht V.; RT ; RL Submitted (17-APR-2014) to the INSDC. RL Albrecht V., Research and Development, DKMS LIFE SCIENCE LAB, Fiedler Str. RL 34, Saxony, 01307 Dresden, GERMANY. XX RN [2] RX DOI; https://doi.org/10.1111/tan.13057. RX PUBMED; 28547825. RA Albrecht V., Zweiniger C., Surendranath V., Lang K., Schofl G., Dahl A., RA Winkler S., Lange V., Bohme I., Schmidt A.H.; RT "Dual redundant sequencing strategy: Full-length gene characterisation of RT 1056 novel and confirmatory HLA alleles"; RL HLA. -:1-9(2017). XX DR MD5; a94688722b11045bbf7ef13dfc7d34a1. DR IMGT/HLA; HLA-C*17:03:01:01; HLA00993. XX FH Key Location/Qualifiers FH FT source 1..3197 FT /organism="Homo sapiens" FT /chromosome="6" FT /isolate="DKMS-LSL-C-155" FT /mol_type="genomic DNA" FT /cell_type="blood cells" FT /db_xref="taxon:9606" FT CDS join(283..355,486..755,1002..1277,1865..2140,2265..2402, FT 2841..2873,2981..3028,3193..3197) FT /gene="HLA-C" FT /allele="HLA-C*17:03" FT /product="MHC class I antigen" FT /db_xref="GOA:I2G9F9" FT /db_xref="InterPro:IPR001039" FT /db_xref="InterPro:IPR003006" FT /db_xref="InterPro:IPR003597" FT /db_xref="InterPro:IPR007110" FT /db_xref="InterPro:IPR010579" FT /db_xref="InterPro:IPR011161" FT /db_xref="InterPro:IPR011162" FT /db_xref="InterPro:IPR013783" FT /db_xref="InterPro:IPR036179" FT /db_xref="InterPro:IPR037055" FT /db_xref="UniProtKB/TrEMBL:I2G9F9" FT /protein_id="CDQ51662.1" FT /translation="MRVMAPQALLLLLSGALALIETWTGSHSMRYFYTAVSRPGRGEPR FT FIAVGYVDDTQFVRFDSDAASPRGEPRAPWVEQEGPEYWDRETQKYKRQAQADRVNLRK FT LRGYYNQSEAGSHTIQRMYGCDLGPDGRLLRGYNQFAYDGKDYIALNEDLRSWTAADTA FT AQISQRKLEAAREAEQLRAYLEGECVEWLRGYLENGKETLQRAERPKTHVTHHPVSDHE FT ATLRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDGTFQKWAAVVVPSGQEQRY FT TCHVQHEGLQEPCTLRWKPSSQPTIPNLGIVSGPAVLAVLAVLAVLAVLGAVVAAVIHR FT RKSSGGKGGSCSQAASSNSAQGSDESLIACKA" FT exon 283..355 FT /gene="HLA-C" FT /allele="HLA-C*17:03" FT /number=1 FT intron 356..485 FT /gene="HLA-C" FT /allele="HLA-C*17:03" FT /number=1 FT exon 486..755 FT /gene="HLA-C" FT /allele="HLA-C*17:03" FT /number=2 FT intron 756..1001 FT /gene="HLA-C" FT /allele="HLA-C*17:03" FT /number=2 FT exon 1002..1277 FT /gene="HLA-C" FT /allele="HLA-C*17:03" FT /number=3 FT intron 1278..1864 FT /gene="HLA-C" FT /allele="HLA-C*17:03" FT /number=3 FT exon 1865..2140 FT /gene="HLA-C" FT /allele="HLA-C*17:03" FT /number=4 FT intron 2141..2264 FT /gene="HLA-C" FT /allele="HLA-C*17:03" FT /number=4 FT exon 2265..2402 FT /gene="HLA-C" FT /allele="HLA-C*17:03" FT /number=5 FT intron 2403..2840 FT /gene="HLA-C" FT /allele="HLA-C*17:03" FT /number=5 FT exon 2841..2873 FT /gene="HLA-C" FT /allele="HLA-C*17:03" FT /number=6 FT intron 2874..2980 FT /gene="HLA-C" FT /allele="HLA-C*17:03" FT /number=6 FT exon 2981..3028 FT /gene="HLA-C" FT /allele="HLA-C*17:03" FT /number=7 FT intron 3029..3192 FT /gene="HLA-C" FT /allele="HLA-C*17:03" FT /number=7 FT exon 3193..3197 FT /gene="HLA-C" FT /allele="HLA-C*17:03" FT /number=8 XX SQ Sequence 3197 BP; 590 A; 944 C; 1005 G; 658 T; 0 other; gatcaggacg aagtcccagg tcccgggcgg ggctctctgg gtctcaagct cccagggccg 60 tgtctgcatt ggggaggcgc agcgttgggg attccccact cccactcccc tgagtttcac 120 ttcttctccc aacctgcgtc gggtccttct tcctgaatac tcatgacgcg tccccaattc 180 ccactcccat tgggtgtcgg gttctagaga agccaatcag cgtctacgca gtcccggttc 240 tgaagtcacc cacccggact cagattctcc ccagacgccg agatgcgggt catggcgccc 300 caagccctcc tcctgctgct ctcgggagcc ctggccctga tcgagacctg gaccggtgag 360 tgcggggttg ggagggaaac ggcctctgcg gagaggagcg aggggcccgc ccggcgaggg 420 cgcaggaccc ggggagccgc gcagggagga gggtcgggcg ggtctcagcc cctcctcgcc 480 cccaggctcc cactccatga ggtatttcta caccgccgtg tcccggcccg gccgcggaga 540 gccccgcttc atcgcagtgg gctacgtgga cgacacgcag ttcgtgcggt tcgacagcga 600 cgccgcgagt ccgagagggg agccgcgggc gccgtgggtg gagcaggagg ggccggagta 660 ttgggaccgg gagacacaga agtacaagcg ccaggcacag gctgaccgag tgaacctgcg 720 gaaactgcgc ggctactaca accagagcga ggccggtgag tgaccccagc ccggggcgca 780 ggtcacgacc cctccccatc ccccacggac ggcccgggtc gccccgagtc tcccggtctg 840 agatcctccc cgaggctgcg gaacccgccc agaccctcga ccggagagag ccctagtcgc 900 ctttacccgg tttcattttc agtttaggcc aaaatccccg cgggttggtc ggggctgggg 960 cggggctcgg gggacggggc tgaccacggg ggcggggcca ggttctcaca ccatccagag 1020 gatgtatggc tgcgacctgg ggcccgacgg gcgcctcctc cgcgggtata accagttcgc 1080 ctacgacggc aaggattaca tcgccctgaa cgaggacctg cgctcctgga ccgcggcgga 1140 cacggcggct cagatctccc agcgcaagtt ggaggcggcc cgtgaggcgg agcagctgag 1200 agcctacctg gagggcgagt gcgtggagtg gctccgcgga tacctggaga acgggaagga 1260 gacgctgcag cgcgcgggta ccaggggcag tggggagcct tccccatctc ctatagatct 1320 cccgggatgg cctcccacga ggaggggagg aaaatgggat cagcgctaga atatcgccct 1380 cccttgaatg gagaatggga tgagttttcc cgagtttcct ctgagggccc cgtctgctct 1440 ctaggacaat taagggatga agtccctgag gaaatggagg ggaagacagt ccctggaata 1500 ctgatcaggg gtcccctttg accactttga ccactgcggc agctgtggtc aggctgctga 1560 cctttctctc aggccttgtt ctctgcctca cactcaatgt gtctgaaggt ttgattccag 1620 cttttctgag tccttcggcc tccactcagg tcaggaccag aagtcgctgt tcctccctca 1680 gagactagaa ctttccaaag aataggagat tatcccaggt ccctgtgtcc aggctggcgt 1740 ctgggttctg tgcccccttc cctaccccag gtgtcctgtc cattctcagg atggtcacat 1800 gggcgctgct ggagtgtcgc aagagagata caaagtgtct gaattttctg actcttcccg 1860 tcagaacgcc caaagacaca cgtgacccac catcccgtct ctgaccatga ggccaccctg 1920 aggtgctggg ccctgggctt ctaccctgcg gagatcacac tgacctggca gcgggatggg 1980 gaggaccaaa ctcaggacac cgagcttgtg gagaccaggc cagcaggaga tggaaccttc 2040 cagaagtggg cagctgtggt ggtgccttct ggacaagaac agagatacac gtgccatgtg 2100 cagcacgagg ggctgcagga gccctgcacc ctgagatgga gtaaggaggg ggatgagggg 2160 tcatgtgtct tctcagggaa agcagaagtc cttctggagc ccttcagccg ggtcagggct 2220 gaggcttggg tgtaagggcc cctcaccttc ccctcctttc ccagagccgt cttcccagcc 2280 caccatcccc aacttgggca tcgtttctgg cccagctgtc ctggctgtcc tggctgtcct 2340 ggctgtccta gctgtcctag gagctgtggt cgctgctgtg atacatagga ggaagagctc 2400 aggtagggaa ggggtgagga gtggggtctg ggttttcttg tcccactggg agtttcaagc 2460 cccaggtaga agtgtgcccc acctcgttac tggaagcacc atccacacct gggccatccc 2520 agcctgggac cctgtgtgcc agcacttact ctgttgtgaa gcacatgaca acgaaggaca 2580 gatgtatcac cttgatgatt atggtgttgg ggtcctgatt ccagcattcg tgagtcaggg 2640 gaaggtccct gctaaggaca gaccttagga gggcagttgc tccagaaccc acagctgctt 2700 tccccgtgtt tcctgatcct gccctgggtc tgcagtcata gttctggaaa cttctcttgg 2760 gtccaagact aggaggttcc cctaagatcg catggccctg cctcctccct gtcccctcac 2820 agggcatttt cttcccacag gtggaaaagg agggagctgc tctcaggctg cgtgtaagtg 2880 atggcggtgg gcgtgtggag gagctcacct accccataat tcctcttgtc ccacatctcc 2940 tgcgggctct gaccaggtct ttttttttgt tctaccccag ccagcaacag tgcccagggc 3000 tctgatgagt ctctcatcgc ttgtaaaggt gagattctgg ggagctgaag tggtcggggg 3060 tggggcagag ggaaaaggcc tgggtaatgg ggatcctttg attgggacgt ttcgagtgtg 3120 tggtggactg ttcagagtgt catcacttac catgactgac ctgaatttgt tcatgactat 3180 tgtgttctgt agcctga 3197 //