Dbfetch

Dbfetch

ID   LC649250; SV 1; linear; genomic DNA; STD; HUM; 1798 BP.
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AC   LC649250;
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DT   03-SEP-2021 (Rel. 144, Created)
DT   11-SEP-2021 (Rel. 144, Last updated, Version 2)
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DE   Homo sapiens HLA-A gene for MHC class I antigen, complete cds, allele:
DE   HLA-JMDP-A-032.
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KW   .
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OS   Homo sapiens (human)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae;
OC   Homo.
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RN   [1]
RP   1-1798
RA   Takada S., Uchida M., Shimizu M., Takahashi D., Satake M.;
RT   ;
RL   Submitted (30-AUG-2021) to the INSDC.
RL   Contact:Shinnosuke Takada Japanese Red Cross Society, Central Blood
RL   Institute; Tatsumi 2-1-67, Koto-ku, Tokyo 135-8521, Japan
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RN   [2]
RA   Takada S., Uchida M., Shimizu M., Takahashi D., Satake M.;
RT   "Homo sapiens HLA-A gene for MHC class I antigen, complete cds, allele:
RT   HLA-JMDP-A-032";
RL   Unpublished.
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DR   MD5; 5e10dff7b62cc426fa7d8d2d67a4a9a4.
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FH   Key             Location/Qualifiers
FH
FT   source          1..1798
FT                   /organism="Homo sapiens"
FT                   /mol_type="genomic DNA"
FT                   /note="HLA-A*02:07:01:01/A*JMDP-A-032,B*46:01:01/
FT                   B*54:01:01,C*01:02:01/C*01:02:01,DRB1*04:05:01/
FT                   DRB1*14:03:01,DRB3*01:01:02/DRB4*01:03:01,DQA1*03:03:01/
FT                   DQA1*05:03:01,DQB1*03:01:01/DQB1*04:01:01,DPA1*02:02:02/
FT                   DPA1*02:02:02,DPB1*05:01:01/DPB1*05:01:01,JMDP01K0317"
FT                   /db_xref="taxon:9606"
FT   CDS             join(1..73,174..443,544..819,920..1195,1296..1412,
FT                   1513..1545,1646..1693,1794..1798)
FT                   /codon_start=1
FT                   /transl_table=1
FT                   /gene="HLA-A"
FT                   /allele="HLA-JMDP-A-032"
FT                   /product="MHC class I antigen"
FT                   /protein_id="BDB04365.1"
FT                   /translation="MAVMAPRTLLLLLLGALALTQTWAGSHSMRYFTTSVSRPGRGEPR
FT                   FIAVGYVDDTQFVRFDSDAASQRMEPRAPWIEQERPEYWDQETRNVKAHSQIDRVDLGT
FT                   LRGYYNQSEAGSHTIQMMYGCDVGSDGRFLRGYQQDAYDGKDYIALNEDLRSWTAADMA
FT                   AQITQRKWEAARVAEQLRAYLEGEFVEWLRRYLENGKETLQRTDPPKTHMTHHAVSDHE
FT                   ATLRCWALSFYPAEITLTWQRDGEDQTQDTELVETRPAGDGTFQKWASVVVPSGQEQRY
FT                   TCHVQHEGLPKPLTLRWEPSSQPTIPIVGIIAGLVLFGAVFAGAVVAAVRWRRKSSDRK
FT                   GGSYSQAASSDSAQGSDMSLTACKV"
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SQ   Sequence 1798 BP; 215 A; 327 C; 368 G; 188 T; 700 other;
     atggccgtca tggcgccccg aaccctcctc ctgctactct tgggggccct ggccctgacc        60
     cagacctggg cggnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn       120
     nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnngctccca       180
     ctccatgagg tatttcacca catccgtgtc ccggcccggc cgcggggagc cccgcttcat       240
     cgccgtgggc tacgtggacg acacgcagtt cgtgcggttc gacagcgacg ccgcgagcca       300
     gaggatggag ccgcgggcgc cgtggataga gcaggagagg cctgagtatt gggaccagga       360
     gacacggaat gtgaaggccc actcacagat tgaccgagtg gacctgggga ccctgcgcgg       420
     ctactacaac cagagcgagg ccgnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn       480
     nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn       540
     nnngttctca caccatccag atgatgtatg gctgcgacgt ggggtcggac gggcgcttcc       600
     tccgcgggta ccagcaggac gcctacgacg gcaaggatta catcgccttg aacgaggacc       660
     tgcgctcttg gaccgcggcg gacatggcgg ctcagatcac ccagcgcaag tgggaggcgg       720
     cccgtgtggc ggagcagttg agagcctacc tggagggcga gttcgtggag tggctccgca       780
     gatacctgga gaacgggaag gagacgctgc agcgcacggn nnnnnnnnnn nnnnnnnnnn       840
     nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn       900
     nnnnnnnnnn nnnnnnnnna cccccccaag acgcatatga ctcaccacgc tgtctctgac       960
     catgaggcca ccctgaggtg ctgggccctg agcttctacc ctgcggagat cacactgacc      1020
     tggcagcggg atggggagga ccagacccag gacacggagc tcgtggagac caggcctgca      1080
     ggggatggaa ccttccagaa gtgggcgtct gtggtggtgc cttctggaca ggagcagaga      1140
     tacacctgcc atgtgcagca tgagggtctc cccaagcccc tcaccctgag atgggnnnnn      1200
     nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn      1260
     nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnagccg tcttcccagc ccaccatccc      1320
     catcgtgggc atcattgctg gcctagttct ctttggagct gtgttcgctg gagctgtggt      1380
     cgctgctgtg aggtggagga ggaagagctc agnnnnnnnn nnnnnnnnnn nnnnnnnnnn      1440
     nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn      1500
     nnnnnnnnnn nnatagaaaa ggagggagct actctcaggc tgcaannnnn nnnnnnnnnn      1560
     nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn      1620
     nnnnnnnnnn nnnnnnnnnn nnnnngcagt gacagtgccc agggctctga tatgtctctc      1680
     acagcttgta aagnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn      1740
     nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnntgtga        1798
//