Dbfetch
ID LC570033; SV 1; linear; genomic DNA; STD; HUM; 7652 BP. XX AC LC570033; XX DT 19-NOV-2020 (Rel. 144, Created) DT 19-NOV-2020 (Rel. 144, Last updated, Version 1) XX DE Homo sapiens HLA-DQB1*05:03:01:04 gene for HLA class II histocompatibility DE antigen DQ beta chain precursor, complete cds. XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-7652 RA Suzuki S., Shiina T.; RT ; RL Submitted (15-JUL-2020) to the INSDC. RL Contact:Shingo Suzuki Tokai University School of Medicine, Department of RL Molecular Life Science; 143 Shimokasuya, Isehara, Kanagawa 259-1193, Japan RL URL :http://mls.med.u-tokai.ac.jp/shiina/ XX RN [2] RA Tamaki K., Morishima S., Suzuki S., Shigenari A., Nomura I., Yokota Y., RA Morichika K., Nishi Y., Nakachi S., Okamoto S., Karube K., Fukushima T., RA Shiina T., Masuzaki H.; RT "Somatic Mutations and Loss of Heterozygosity of HLA Genes Are Frequently RT Occurred and Tightly Associated with Poor Prognosis in Adult T Cell RT Leukemia-Lymphoma"; RL Unpublished. XX DR MD5; 27daba9ee5ecc51fd84d41d0a7f3548a. XX FH Key Location/Qualifiers FH FT source 1..7652 FT /organism="Homo sapiens" FT /mol_type="genomic DNA" FT /db_xref="taxon:9606" FT CDS join(1229..1337,2796..3065,5575..5856,6368..6478, FT 6943..6966,7576..7589) FT /codon_start=1 FT /transl_table=1 FT /gene="HLA-DQB1" FT /allele="HLA-DQB1*05:03:01:04" FT /product="HLA class II histocompatibility antigen DQ beta FT chain precursor" FT /protein_id="BCI59334.1" FT /translation="MSWKKSLRIPGDLRVATVTLMLAILSSSLAEGRDSPEDFVYQFKG FT LCYFTNGTERVRGVTRHIYNREEYVRFDSDVGVYRAVTPQGRPDAEYWNSQKEVLEGAR FT ASVDRVCRHNYEVAYRGILQRRVEPTVTISPSRTEALNHHNLLICSVTDFYPSQIKVRW FT FRNDQEETAGVVSTPLIRNGDWTFQILVMLEMTPQRGDVYTCHVEHPSLQSPITVEWRA FT QSESAQSKMLSGVGGFVLGLIFLGLGLIIRQRSRKGPQGPPPAGLLH" XX SQ Sequence 7652 BP; 2006 A; 1715 C; 1796 G; 2135 T; 0 other; aagaggagcc tgataagtta cgttcattta taaaaacaca ttgatgtaga tatgtccatg 60 aggaactgtt aaaaaaatag aattgaaaaa aaacacattg atacctctgc catttgggat 120 ttgatgttta ggcctggcac agtacactct gtgactctaa acactttctc catcattagt 180 actattcagg acccaggaaa tgcttctcca caggttttgc gctctctctt caaaacgaaa 240 catgactgca tccgaatact gtaaaattct gtgtattgtg cctttgctga tatcagatgc 300 accatttcat ggttcaggga ggatttaaac agctgaagaa cttaaaaaag aaatgtcaac 360 ttaattaact tttcaaatac tttcactaga agagcataaa tacaatatgt tcttgcataa 420 tgaagaatca tttaccagca ggggtgggtg tcaatttttt tttttttggc ttgttttctt 480 gttccacata ttaacctgat agttacacat aacagttgag gagccttttg taatattaaa 540 caagacaaat taatcttaaa tttgtacatg tgaagatcta gatgtaaaat gcatgaaaca 600 tgacccacat tttataaaga gaagcctggg gcaaaaataa attcagtaat ttgttgactc 660 ttctaaagca cattagtggt ggaactgcaa ctcaccatta tttccttcta agacctttgc 720 tcttctcccc aggacttaag gctcttcagc gtgtctaaga caacagcagt aaaaatttct 780 gtgacagcaa ttttctctcc cctgaaatat gatccccacc taatttgctt tattaaaaat 840 cccaagtata ataacaactg gtttttaaca atattacaga gatgtttact gttgaattgc 900 atttttcttt tgcctctcaa aatccctgag gaatttgttc ttcagctctt ctataatcga 960 gaggaaattt tcacctcaga tgttcatcca gtgcaattgg aagacgtcac agtgccaggc 1020 actggattga gaaccttcac aaaaaaaatg tctgcccaga gacagatgag gtccttcagc 1080 tccagtgctg attggttctt ttccaagcga ccatccaatc ctgccacgca cggaaacatc 1140 cacaggtttt tattctttct gccaggtaca tcagatccat caggtctgag ctgtgttgac 1200 taccactact tttcccttcg tctcaattat gtcttggaag aagtctttgc ggatccccgg 1260 agaccttcgg gtagcaactg tcaccttgat gctggcgatc ctgagctcct cactggctga 1320 gggcagagac tctcccggta agtgcaggaa agctgctctc cagagccgcc actctgggaa 1380 caggctttcc ttgggctggg gtatggggga tggtgatctc catggtcttg gacacaatct 1440 ttcatcaaca tttcctcttt tttgggaaag aaagctatgt tgcattccca tttacctttt 1500 agtgatgaaa tgaggacaat ccaatcccca tcctacaggt ttaagcctgg aagaggagga 1560 gagaggagag gaaagaggag ataaagtgta catttactac cagtgatagg acaaagtgag 1620 catggggtta tttttgaaga tattaatttc tccaaagaca cagcaggatt tgtcatttca 1680 gcgtgcccca agactttgcc tggactaaat attatgagat tctgcagtgg gaaatgtaag 1740 gcagcgatgg tgtctgtagt ctccgtattt gaggaaaagt agtctgtatt cctgactgac 1800 tggagcgttt gtggaggcaa aatcttggta ctgagggaag ctgactggct gaccacagac 1860 agggagtctt caggtttcac tgatttatgg gcaaatggtg acttgagtgg gattcagaga 1920 cccgagttgc tggtggacta aatttagtag aaaggaggat gtaaagaagg gaaataacac 1980 atattatgaa accactcact cagacacaga acaatacttt acataaattc tctctcactc 2040 cttctaacat cctgtgtgca gatatcatga ttttctttta cacaattata cttgtgatac 2100 ggatattctg cccaatatgg atatacacaa cctggccaag ctggtaactg ccacagttta 2160 ataggaatct agtttatcaa attcaaaagc ttatgctctt tccatgaata aatatttcta 2220 tctaggactc agagttgtag gtcctttcca acatagaagg gagtgaacct caacgggtct 2280 tgggagggta aatccaggca tgggaaggaa ggtattttac ccagggacca agagaatacg 2340 cgtatcagaa cgaggacaag attaattcct ggacctgtcg catcattccc ttgaactcac 2400 aggtttatgt ggataagttt atctctgagg tttccaggag ctgcatgaaa aatgggattt 2460 catgcgagaa cgccccgatc cctctaagtg cagaggtcca tgtaaaatca gcccgactgc 2520 ctcttcgctg ggttcactgg ctcaggcagg gacagggctt tccgcccttt cctgcctgta 2580 ggaaggcgga ttcccgaagc ccccagagag ggcgggcagg gctgggcaga gccgccggga 2640 ggatcccagg tctggggcgc caggcacggg ctggcgggaa ctggaggtcg cgcgggcggt 2700 tccacagctc cggtccgggt cagggcggcg gctgggggcg cagccgggct agggccaggc 2760 tggggcctga ctgactggcc cgtgattccc cgcagaggat ttcgtgtacc agtttaaggg 2820 cctgtgctac ttcaccaacg ggacggagcg cgtgcggggt gtgaccagac acatctataa 2880 ccgagaggag tacgtgcgct tcgacagcga cgtgggggtg tatcgggcgg tgacgccgca 2940 ggggcggcct gacgccgagt actggaacag ccagaaggaa gtcctggagg gggcccgggc 3000 gtcggtggac agagtgtgca gacacaacta cgaggtggcg taccgcggga tcctgcagag 3060 gagaggtgag cgtcgtcgcc cctccgtgag gcccaccgtt ggccgggacc tctagtctct 3120 gtgctgggag gggcgatggg gttgcggcct ctgaaacctg agccccgttt attccacccc 3180 aggggacagg agttggcggc gtgagtggtg gggcaggtgc atcagatggg cggggaccta 3240 gggcagagca gggagacaag cagagttggc caggctgcct agtgtccccc cagggtcctc 3300 ctctgttggc ctcgtcctcc gctctgcacg tttctcgcct cgtgccttat gtgtttgcct 3360 cctcgtgcct tacctttgct aagcagttct ctctgccccc aatgcccacc ctcttcccct 3420 gcccgtccgc cccactagca ctgccccatt cagcaaggcc cacgtgcgca gctcgcgcct 3480 caggaagctt caggcttggc ctggtggagt tagggctgcc ccacaactgc gcccagggca 3540 tccagcaatt acagttgcaa aataagatat tttgactttt tggcttcaaa tcattattca 3600 tcgtaattct gttttcctaa atggctatca ctaatggcgg agatttttga ggtgggagac 3660 tgtttaaatt attgcatgct tggtacctga cactttgact ggtatgtggt atgagctcaa 3720 tgatcttctg ttaaattcat gaataaatgt actcagctgc ccatccactt aggctcaaga 3780 aaaaaacaga ggcttacaaa tggactttgt taattatttt ctatcatttt gcttaatgct 3840 ttaaagtaaa ctcttattga ctaggatctt aatagaattt gtgaatacaa agtctgagaa 3900 aaaaagtgtt tgctaaaaat aaaaacaatg cttgaatgac gttgtaaggc agagttttaa 3960 tttcttagac aagctgaaca aatggcacaa tgcaaagggc agaagtttgg gaataaatag 4020 gttgaagcca ttaaattatt agataaaaat agtttcaggt tgcttttggc ctgggttctc 4080 ccctccctcc atcactatcc acttcaggaa taaacattct gaaagtcaat tttacccatt 4140 caggtagcac ttatttctag acagttgcct tatcaaatac catatatgtt gtgccattta 4200 atctcacagt tacctgtgca ttagagatta gcatcaccac ttgatatatc ctaatattgg 4260 tacaggataa acactttaag taatcagccc acaattactc accaagacct taagcctccc 4320 aaagtataaa ccattcttat gttcctcagt gtacatccat agagtctaag ggatgtaagg 4380 ccttgttaaa gccagttttg accagaagca gcaatgagcc tattcctgtt tgttctccat 4440 gttaatgggg cattgaaaat tcactgatta atcaatccct agtctgaccc cagtgttatc 4500 tatgcaggtt cacaaaactt ttagattact ttacaccccc ttgccttctt ttgactcaca 4560 ttctaatgcc agcaagtact tatatttttg ctatttcaat tctatttcca taaaatttat 4620 tttatcatct tttctcataa aattgtgcct tctattttac tcccagtctg tttaagatga 4680 acaaatctta caaggtcaca tagctgactg tgatatcagt tggactccag gaaggagaac 4740 ctaaagaaaa gttcaagtcc aagcagaaac cgtgattcct tccggatgat ggctcaagag 4800 tgctgtttaa ctgggatgca acctgctgac ctcagcaaat cctagttata tgtatgtgtt 4860 cacattacag gctcattagc ccaggccgac ctctgcatgg atctcagaat attttctatg 4920 gagaacatac atgataatgt ctgatttcag aacaagaaag taattctcaa tagcaaggaa 4980 atggagtagg gtagacagct agtaactaaa ctcacttgtg cgttaagaag aaattaagga 5040 aaaaagaaaa taagagaaca tattactaaa taaagaaaca cacattaaat atttgctata 5100 gtttcacact aagagaataa aggaaatgca ataaagtggc ctgaaaggta aaggatgaga 5160 tgtgtaaaag aggcagggaa agatgtataa taatttttta ctatgagcag caatctgaga 5220 agataaagga attgagctgt gggcaaacat gatgtttgat cagtgttatt tgttttcaag 5280 gcctgcctac tttttttttc aaatattaca aacttttgaa ataacattct ttttgttttt 5340 tactgtctgt tactagattg catattctat aaatgaaggg accatggtat gttgtttatc 5400 tttggattct cagtgattgt caaatttata tttgttgaag gaaccttaat ccaagacttg 5460 gactccaggt atctttccac tctggttcca aggagggacc ctttctcatg gtggacatgc 5520 tgtgtggtct cacgtctcac tcctgtgtct tttcctgtct gttactgccc ttagtggagc 5580 ccacagtgac catctcccca tccaggacag aggccctcaa ccaccacaac ctgctgatct 5640 gctcggtgac agatttctat ccaagccaga tcaaagtccg gtggtttcgg aatgatcagg 5700 aggagacagc cggcgttgtg tccacccccc tcattaggaa cggtgactgg accttccaga 5760 tcctggtgat gctggaaatg actccccagc gtggagatgt ctacacctgc cacgtggagc 5820 accccagcct ccagagcccc atcaccgtgg agtggcgtaa ggagatattg agtttctgtt 5880 attatgggcc ccacaagaca aagagctcct tctgacccat tccttcccat ctcttatccc 5940 tgatgtcact actgagctgg gaatcacagg agactagagc acctctagtt ccatggcgag 6000 tgcatcagaa gaatcctgat ctcatcacct ttccagatgc tagggaaatt actctacata 6060 ctgttgctct ggatcccagt cctgatagct ctgacggact gattcttagg gctggtgatt 6120 gggatcttag ggtctaaggt tatggatgag ttcctgagga gcagagattt gcttccccac 6180 tctctcacct acccactgta tccaaggacc tattgtctgg cctttcccct ccttaggggt 6240 ggtctgaatg gagagctagg ttcctttgat gccttcacct cctgcacctc agactggact 6300 tcggctcctc agcagggatg ctatggggtg tggggacaaa caccgacact caggttctgc 6360 tttttagggg ctcagtctga atctgcccag agcaagatgc tgagtggcgt tggaggcttc 6420 gtgctggggc tgatcttcct tgggcttggc cttatcatcc gtcaaaggag tcggaaaggt 6480 gaggaacccc aggggaaaag gggaagatgg gctgtgaccc agaccctctg ttcagagtgg 6540 tcctgtctgt agattagctc tttcctcctg accctgagag gaagtgcgag gagacaggac 6600 aagatgggag gaggcattgg aatctgattt tactggttga aaggtagcgc tgtcacagag 6660 ctgactgata gagcttattc cagggcatcc ttaccattca tcattgtctc actggctcct 6720 ttccaaaagc ttcctccatt aagagggtca gagcctcagc ctcctttctt tctggtgaca 6780 atttcctttg ttttagggga ttttaaatta gggtgctgaa ggcctggaag aacatgggtg 6840 ggaagagaat gtaactctaa gtcatgtgtg tcattttcct ttggggtgag agagtggctg 6900 tttgtgtaat gagacctttc tctgcataac ttccttttgt aggacctcaa gggcctccac 6960 cagcaggtaa tatttcagcc atgatccagt gtggggaggc acaggtataa gagggaagag 7020 catgagctga gtgtacctga ccacagtggt ccatgttcat ggcctatttg ctgctatgag 7080 gatcaagact taggggagaa gtttgccagt ttctaggaat ctccagacat tgttccccag 7140 aaccaagcct taactttggt ggcatcttct tgtgaaatgt ggagccagaa ccacagctta 7200 aatgttagac actaggatga tgcccacttt gtgccacatg atggtggcta ctgcctgtag 7260 gcattttcca gtgactgaaa gaggctgcta gtggtcggga tgagatatca tccaatttcc 7320 taaaaagact gaacccttca tattccccag aagaataaca gctgttcccc acctcccaca 7380 catctgcatc aagctgaagt tctgtgtcct cgtgagctga tttcaccttt gcacagatct 7440 tgggggaggt gatgacaata caccctggac ctcaactttc tctgtctgaa gctgcagggg 7500 gcccctgaag ggtgggggag atggcaggcc caccaggata ccctgtgctg atcaatcctc 7560 ttctctcttc tccagggctt ctgcactgac tcctgagact gttttaacta agactggtta 7620 tcactcttct gtgatgcctg cttgtccctg cc 7652 //