ID LC440551; SV 1; linear; genomic DNA; STD; HUM; 1022 BP.
XX
AC LC440551;
XX
DT 02-JAN-2019 (Rel. 139, Created)
DT 02-JAN-2019 (Rel. 139, Last updated, Version 1)
XX
DE Homo sapiens HLA-C*04:55 gene for MHC class I antigen, partial cds.
XX
KW .
XX
OS Homo sapiens (human)
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae;
OC Homo.
XX
RN [1]
RP 1-1022
RA Shimizu M., Nakajima F., Satake M.;
RT ;
RL Submitted (21-DEC-2018) to the INSDC.
RL Contact:Marie Shimizu Japanese Red Cross Society, Central Blood Institute;
RL Tatsumi 2-1-67, Koto-ku, Tokyo 135-8521, Japan
XX
RN [2]
RA Shimizu M., Nakajima F., Satake M.;
RT "HLA-C*04:55";
RL Unpublished.
XX
DR MD5; 3a6ffc0e7deec3b8bfa7c1032ebadd42.
XX
FH Key Location/Qualifiers
FH
FT source 1..1022
FT /organism="Homo sapiens"
FT /mol_type="genomic DNA"
FT /note="A*02:10/A*11:01,B*15:01/B*40:06,C*04:55/
FT C*08:01:01:01,DRB1*04:05/DRB1*04:06,DRB4*01:03/DRB4*01:03,
FT DQA1*03:01/DQA1*03:03,DQB1*03:02/DQB1*04:01,DPA1*01:03/
FT DPA1*01:03,DPB1*02:01/DPB1*02:01,JRC-D43-002"
FT /db_xref="taxon:9606"
FT CDS join(<1..270,371..646,747..>1022)
FT /codon_start=3
FT /transl_table=1
FT /gene="HLA-C"
FT /allele="HLA-C*04:55"
FT /product="MHC class I antigen"
FT /db_xref="InterPro:IPR001039"
FT /db_xref="InterPro:IPR003006"
FT /db_xref="InterPro:IPR003597"
FT /db_xref="InterPro:IPR007110"
FT /db_xref="InterPro:IPR011161"
FT /db_xref="InterPro:IPR011162"
FT /db_xref="InterPro:IPR013783"
FT /db_xref="InterPro:IPR036179"
FT /db_xref="InterPro:IPR037055"
FT /db_xref="UniProtKB/TrEMBL:A0A3Q9WY52"
FT /protein_id="BBH85240.1"
FT /translation="SHSMRYFSTSVSWPGRGEPRFIAVGYVDDTQFVRFDSDAASPRGE
FT PREPWVEQEGPEYWDRETQKYKRQAQTDRVSLRNLRGYYNQSEARSHTLQRMFGCDLGP
FT DGRLLRGYNQFAYDGKDYIALNEDLRSWTAADTAAQITQRKWEAAREAEQRRAYLEGTC
FT VEWLRRYLENGKETLQRAEHPKTHVTHHPVSDHEATLRCWALGFYPAEITLTWQWDGED
FT QTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRYTCHVQHEGLPEPLTLRW"
FT gap 271..370
FT /estimated_length=unknown
FT gap 647..746
FT /estimated_length=unknown
XX
SQ Sequence 1022 BP; 172 A; 248 C; 286 G; 116 T; 200 other;
gctcccactc catgaggtat ttctccacat ccgtgtcctg gcccggccgc ggggagcccc 60
gcttcatcgc agtgggctac gtggacgaca cgcagttcgt gcggttcgac agcgacgccg 120
cgagtccaag aggggagccg cgggagccgt gggtggagca ggaggggccg gagtattggg 180
accgggagac acagaagtac aagcgccagg cacagactga ccgagtgagc ctgcggaacc 240
tgcgcggcta ctacaaccag agcgaggcca nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 300
nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 360
nnnnnnnnnn ggtctcacac cctccagagg atgtttggct gcgacctggg gccggacggg 420
cgcctcctcc gcgggtataa ccagttcgcc tacgacggca aggattacat cgccctgaac 480
gaggatctgc gctcctggac cgccgcggac acggcggctc agatcaccca gcgcaagtgg 540
gaggcggccc gtgaggcgga gcagcggaga gcctacctgg agggcacgtg cgtggagtgg 600
ctccgcagat acctggagaa cgggaaggag acgctgcagc gcgcggnnnn nnnnnnnnnn 660
nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 720
nnnnnnnnnn nnnnnnnnnn nnnnnnaaca cccaaagaca cacgtgaccc accatcccgt 780
ctctgaccat gaggccaccc tgaggtgctg ggccctgggc ttctaccctg cggagatcac 840
actgacctgg cagtgggatg gggaggacca aactcaggac accgagcttg tggagaccag 900
gccagcagga gatggaacct tccagaagtg ggcagctgtg gtggtgcctt ctggagaaga 960
gcagagatac acgtgccatg ttcagcacga ggggctgccg gagcccctca ccctgagatg 1020
ga 1022
//