Dbfetch
ID LC361333; SV 1; linear; genomic DNA; STD; HUM; 1022 BP. XX AC LC361333; XX DT 06-JUL-2018 (Rel. 137, Created) DT 06-JUL-2018 (Rel. 137, Last updated, Version 1) XX DE Homo sapiens HLA-C gene for MHC class I antigen, partial cds, allele: DE C*JMDP-C-035. XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RA Shimizu M., Nakajima F., Satake M.; RT "HLA-JMDP-C-035"; RL Unpublished. XX RN [2] RP 1-1022 RA Shimizu M., Nakajima F., Satake M.; RT ; RL Submitted (10-JAN-2018) to the INSDC. RL Contact:Marie Shimizu Japanese Red Cross Society, Central Blood Institute; RL Tatsumi 2-1-67, Koto-ku, Tokyo 135-8521, Japan XX DR MD5; a4b3397ba056a3cb1458c3b77de934d4. XX FH Key Location/Qualifiers FH FT source 1..1022 FT /organism="Homo sapiens" FT /mol_type="genomic DNA" FT /note="HLA-A*24:02/A*33:03,B*35:01/B*44:03,C*JMDP-C-035/ FT C*14:03,DRB1*12:01/DRB1*13:02,JMDP36K0305" FT /db_xref="taxon:9606" FT gene <1..>1022 FT /gene="HLA-C" FT CDS join(<1..270,371..646,747..>1022) FT /codon_start=3 FT /gene="HLA-C" FT /allele="C*JMDP-C-035" FT /product="MHC class I antigen" FT /db_xref="InterPro:IPR001039" FT /db_xref="InterPro:IPR003006" FT /db_xref="InterPro:IPR003597" FT /db_xref="InterPro:IPR007110" FT /db_xref="InterPro:IPR011161" FT /db_xref="InterPro:IPR011162" FT /db_xref="InterPro:IPR013783" FT /db_xref="InterPro:IPR036179" FT /db_xref="InterPro:IPR037055" FT /db_xref="UniProtKB/TrEMBL:A0A2Z5XAE7" FT /protein_id="BBC43092.1" FT /translation="SHSMRYFYTAVSRPGRGEPRFIAVGYVDDTQFVQFDSDAASPRGE FT PRAPWVEQEGPEYWDRETQKYKRQAQTDRVSLRNLRGYYNQSEAGSHTLQRMYGCDLGP FT DGRLLRGYNQFAYDGKDYIALNEDLRSWTAADTAAQITQRKWEAAREAEQWRAYLEGTC FT VEWLRRYLENGKETLQRAEHPKTHVTHHPVSDHEATLRCWALGFYPAEITLTWQRDGED FT QTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRYTCHVQHEGLPEPLTLRW" FT gap 271..370 FT /estimated_length=unknown FT gap 647..746 FT /estimated_length=unknown XX SQ Sequence 1022 BP; 173 A; 252 C; 285 G; 112 T; 200 other; gctcccactc catgaggtat ttctacaccg ccgtgtcccg gcccggccgc ggagagcccc 60 gcttcatcgc agtgggctac gtggacgaca cgcagttcgt gcagttcgac agcgacgccg 120 cgagtccaag aggggagccg cgggcgccgt gggtggagca ggaggggccg gagtattggg 180 accgggagac acagaagtac aagcgccagg cacagactga ccgagtgagc ctgcggaacc 240 tgcgcggcta ctacaaccag agcgaggccg nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 300 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 360 nnnnnnnnnn ggtctcacac cctccagagg atgtatggct gcgacctggg gcccgacggg 420 cgcctcctcc gcgggtataa ccagttcgcc tacgacggca aggattacat cgccctgaac 480 gaggacctgc gctcctggac cgctgcggac acggcggctc agatcaccca gcgcaagtgg 540 gaggcggccc gtgaggcgga gcagtggaga gcctacctgg agggcacgtg cgtggagtgg 600 ctccgcagat acctggagaa cgggaaggag acgctgcagc gcgcggnnnn nnnnnnnnnn 660 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 720 nnnnnnnnnn nnnnnnnnnn nnnnnnaaca cccaaagaca cacgtgaccc accatcccgt 780 ctctgaccat gaggccaccc tgaggtgctg ggccctgggc ttctaccctg cggagatcac 840 actgacctgg cagcgggatg gcgaggacca aactcaggac accgagcttg tggagaccag 900 gccagcagga gatggaacct tccagaagtg ggcagctgtg gtggtgcctt ctggagaaga 960 gcagagatac acgtgccatg tgcagcacga ggggctgcca gagcccctca ccctgagatg 1020 gg 1022 //