Dbfetch
ID LC314767; SV 1; linear; genomic DNA; STD; HUM; 2895 BP. XX AC LC314767; XX DT 09-AUG-2017 (Rel. 133, Created) DT 09-AUG-2017 (Rel. 133, Last updated, Version 1) XX DE Homo sapiens HLA-C gene for MHC class I antigen, complete cds, allele: DE HLA-C*03:99. XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-2895 RA Shimizu M., Nakajima F., Satake M.; RT ; RL Submitted (01-AUG-2017) to the INSDC. RL Contact:Marie Shimizu Japanese Red Cross Society, Central Blood Institute; RL Tatsumi 2-1-67, Koto-ku, Tokyo 135-8521, Japan XX RN [2] RA Shimizu M., Nakajima F., Satake M.; RT "HLA-C*03:99"; RL Unpublished. XX DR MD5; 0feed262bd6a726e18d4914233efc11a. XX FH Key Location/Qualifiers FH FT source 1..2895 FT /organism="Homo sapiens" FT /mol_type="genomic DNA" FT /note="A*24:02:01:01/A*24:02:01:01,B*51:01:01:01/ FT B*54:01:01,C*03:99/C*14:02:01:01,DRB1*04:05:01/ FT DRB1*09:01:02,DRB4*01:XX1/DRB4*01:XX1,DQA1*03:BC/ FT DQA1*03:BC,DQB1*03:XX1/DQB1*04:ZMSX,DPA1*01:CU/DPA1*02:01, FT DPB1*02:01/DPB1*09:01,JRC-D03395" FT /db_xref="taxon:9606" FT CDS join(1..73,204..473,720..995,1583..1858,1980..2099, FT 2539..2571,2679..2726,2891..2895) FT /codon_start=1 FT /transl_table=1 FT /gene="HLA-C" FT /allele="HLA-C*03:99" FT /product="MHC class I antigen" FT /db_xref="GOA:A0A0U5Q1S0" FT /db_xref="InterPro:IPR001039" FT /db_xref="InterPro:IPR003006" FT /db_xref="InterPro:IPR003597" FT /db_xref="InterPro:IPR007110" FT /db_xref="InterPro:IPR010579" FT /db_xref="InterPro:IPR011161" FT /db_xref="InterPro:IPR011162" FT /db_xref="InterPro:IPR013783" FT /db_xref="InterPro:IPR036179" FT /db_xref="InterPro:IPR037055" FT /db_xref="UniProtKB/TrEMBL:A0A0U5Q1S0" FT /protein_id="BBA20800.1" FT /translation="MRVMAPRTLILLLSGALALTETWACSHSMRYFYTAVSRPGRGEPR FT FISVGYVDDTQFVRFDSDAASPRGEPRAPWVEQEGPEYWDRETQKYKRQAQTDRVSLRN FT LRGYYNQSEAGSHTLQWMCGCDLGPDGRLLRGYDQYAYDGKDYIALNEDLRSWTAADTA FT AQITQRKWEAAREAEQRRAYLEGTCVEWLRRYLENGKETLQRAEHPKTHVTHHPVSDHE FT ATLRCWALGFYPAEITLTWQWDGEDQTQDTELVETRPAGDGTFQKWAAVMVPSGEEQRY FT TCHVQHEGLPEPLTLRWEPSSQPTIPIVGIVAGLAVLAVLAVLGAVVAVVMCRRKSSGG FT KGGSCSQAASSNSAQGSDESLIACKA" FT exon <1..73 FT /gene="HLA-C" FT /number=1 FT intron 74..203 FT /gene="HLA-C" FT /number=1 FT exon 204..473 FT /gene="HLA-C" FT /number=2 FT intron 474..719 FT /gene="HLA-C" FT /number=2 FT exon 720..995 FT /gene="HLA-C" FT /number=3 FT intron 996..1582 FT /gene="HLA-C" FT /number=3 FT exon 1583..1858 FT /gene="HLA-C" FT /number=4 FT intron 1859..1979 FT /gene="HLA-C" FT /number=4 FT exon 1980..2099 FT /gene="HLA-C" FT /number=5 FT intron 2100..2538 FT /gene="HLA-C" FT /number=5 FT exon 2539..2571 FT /gene="HLA-C" FT /number=6 FT intron 2572..2678 FT /gene="HLA-C" FT /number=6 FT exon 2679..2726 FT /gene="HLA-C" FT /number=7 FT intron 2727..2890 FT /gene="HLA-C" FT /number=7 FT exon 2891..>2895 FT /gene="HLA-C" FT /number=8 XX SQ Sequence 2895 BP; 542 A; 835 C; 926 G; 592 T; 0 other; atgcgggtca tggcgccccg aaccctcatc ctgctgctct cgggagccct ggccctgacc 60 gagacctggg cctgtgagtg cggggttggg agggaaacgg cctctgcgga gaggaacgag 120 gtgcccgccc ggcgagggcg caggacccgg ggagccgcgc agggaggagg gtcgggcggg 180 tctcagcccc tcctcgcccc caggctccca ctccatgagg tatttctaca ccgccgtgtc 240 ccggcccggc cgcggagagc cccgcttcat ctcagtgggc tacgtggacg acacgcagtt 300 cgtgcggttc gacagcgacg ccgcgagtcc gagaggggag ccgcgggcgc cgtgggtgga 360 gcaggagggg ccggagtatt gggaccggga gacacagaag tacaagcgcc aggcacagac 420 tgaccgagtg agcctgcgga acctgcgcgg ctactacaac cagagcgagg ccggtgagtg 480 accccggccc ggggcgcagg tcacgacccc tcctcatccc ccacggacgg cccgggtcgc 540 cccaagtctc ccggtctgag atccaccccg aggctgcgga acccgcccag accctcgacc 600 ggagagagcc ccagtcacct ttacccggtt tcattttcag tttaggccaa aatccccgcg 660 ggttggtcgg gactggggcg gggctcgggg gacggggctg accacggggg cggggccagg 720 gtctcacacc ctccagtgga tgtgtggctg cgacctgggg cccgacgggc gcctcctccg 780 cgggtatgac cagtacgcct acgacggcaa ggattacatc gccctgaacg aggacctgcg 840 ctcctggacc gccgcggaca ccgcggctca gatcacccag cgcaagtggg aggcggcccg 900 tgaggcggag cagcggagag cctacctgga gggcacgtgc gtggagtggc tccgcagata 960 cctggagaac gggaaggaga cgctgcagcg cgcgggtacc aggggcagtg gggagccttc 1020 cccatctccc gtagatctcc cggcatggcc tcccacgagg aggggaggaa aatgggatca 1080 gcgctagaat atcgccctcc cttgaatgga gaatgggatg agttttcctg agtttcctct 1140 gagggccccc tctgctctct aggacaatta agggatgaag tccttgagga aatggagggg 1200 aagacagtcc ctggaatact gatcaggggt cccctttgac cactttgacc actgcagcag 1260 ctgtggtcag gctgctgacc tttctctcag gccttgttct ctgcctcacg ctcaatgtgt 1320 ttgaaggttt gattccagct tttctgagtc cttcggcctc cactcaggtc aggaccagaa 1380 gtcgctgttc ctccctcaga gactagaact ttccaatgaa taggagatta tcccaggtgc 1440 ctgtgtccag gctggcgtct gggttctgtg cccccttccc caccccaggt gtcctgtcca 1500 ttctcaggat ggtcacatgg gcgctgttgg agtgtcgcaa gagagataca aagtgtctga 1560 attttctgac tcttcccgtc agaacaccca aagacacacg tgacccacca tcccgtctct 1620 gaccatgagg ccaccctgag gtgctgggcc ctgggcttct accctgcgga gatcacactg 1680 acctggcagt gggatgggga ggaccaaact caggacaccg agcttgtgga gaccaggcca 1740 gcaggagatg gaaccttcca gaagtgggca gctgtgatgg tgccttctgg agaagagcag 1800 agatacacgt gccatgtgca gcacgagggg ctgccggagc ccctcaccct gagatggggt 1860 aaggaggggg atgaggggtg atgtgtcttc tcagggaaag cagaagtcct ggagcccttc 1920 agccgggtca gggctgaggc ttggaggtca gggcccctca ccttcccctc ctttcccaga 1980 gccgtcttcc cagcccacca tccccatcgt gggcatcgtt gctggcctgg ctgtcctggc 2040 tgtcctagct gtcctaggag ctgtggtggc tgttgtgatg tgtaggagga agagctcagg 2100 tagggaaggg gtgaggagtg gggtctgggt tttcttgttc cactgggagt ttcaagcccc 2160 aggtagaagt gtgccccacc tcgttactgg aagcaccatc cacacatggg ccatcccagc 2220 ctgggaccct gtgtgccagc acttactctg ttgtgaagca catgacaatg aaggacagat 2280 gtatcacctt gatgattatg gtgttggggt ccttgattcc agcattcatg agtcagggga 2340 aggtccctgc taaggacaga ccttaggagg gcagttgctt cagaacccac agctgctttc 2400 cccgtgtttc ctgatcctgc cctgggtctg cagtcatagt tctggaaact tctcttgggt 2460 ccaagactag gaggttcccc taagatcgca tggccctgcc tcctccctgt cccctcacag 2520 ggcattttct tcccacaggt ggaaaaggag ggagctgctc tcaggctgcg tgtaagtgat 2580 ggcggtgggc gtgtggagga gctcacccac cccataattc ctcttgtccc acatctcctg 2640 cgggctctga ccaggtcttt ttttttgttc taccccagcc agcaacagtg cccagggctc 2700 tgatgagtct ctcatcgctt gtaaaggtga gattctgggg agctgaagtg gtcgggggtg 2760 gggcagaggg aaaaggccta ggtaatgggg atcctttgat tgggacgttt cgaatgtgtg 2820 gtgagctgtt cagagtgtca tcacttacca tgactgacct gaatttgttc atgactattg 2880 tgttctgtag cctga 2895 //