Dbfetch
ID LC269341; SV 1; linear; genomic DNA; STD; HUM; 1022 BP. XX AC LC269341; XX DT 12-MAY-2017 (Rel. 132, Created) DT 12-MAY-2017 (Rel. 132, Last updated, Version 1) XX DE Homo sapiens HLA-C gene for MHC class I antigen, partial cds, allele: DE HLA-C*JRC-C-009. XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-1022 RA Shimizu M., Nakajima F., Satake M.; RT ; RL Submitted (10-MAY-2017) to the INSDC. RL Contact:Marie Shimizu Japanese Red Cross Society, Central Blood Institute; RL Tatsumi 2-1-67, Koto-ku, Tokyo 135-8521, Japan XX RN [2] RA Shimizu M., Nakajima F., Satake M.; RT "HLA-C*JRC-C-009"; RL Unpublished. XX DR MD5; 7cf30ac1aa089c913c43d1ac2f3a7270. XX FH Key Location/Qualifiers FH FT source 1..1022 FT /organism="Homo sapiens" FT /mol_type="genomic DNA" FT /note="A*02:06/A*02:07,B*15:18/B*39:01,JRC-C-009/ FT C*08:01:01,DRB1*04:03/DRB1*08:03,DRB4*01:01,DQA1*01:03/ FT DQA1*03:01,DQB1*03:02/DQB1*06:01,DPA1*01:03/DPA1*02:02, FT DPB1*02:01/DPB1*03:01,JRC-D01-393" FT /db_xref="taxon:9606" FT CDS join(<1..270,371..646,747..>1022) FT /codon_start=3 FT /transl_table=1 FT /gene="HLA-C" FT /allele="HLA-C*JRC-C-009" FT /product="MHC class I antigen" FT /db_xref="InterPro:IPR001039" FT /db_xref="InterPro:IPR003597" FT /db_xref="InterPro:IPR007110" FT /db_xref="InterPro:IPR011161" FT /db_xref="InterPro:IPR011162" FT /db_xref="InterPro:IPR013783" FT /db_xref="InterPro:IPR036179" FT /db_xref="InterPro:IPR037055" FT /db_xref="UniProtKB/TrEMBL:A0A1W7INV8" FT /protein_id="BAX51237.1" FT /translation="SHSMRYFDTAVSRPGRGEPRFISVGYVDDTQFVRFDSDAASPRGE FT PRAPWVEQEGPEYWDRETQKYKRQAQADRVNLRKLRGYYNQSEAGSHTLQRMSGCDLGP FT DGRLLRGYDQSAYDGKDYIALNEDLRSWTAADTAAQITQRKLEAARAAEQLRAYLEGTC FT VEWLRRYLENGKETLQRAEPPKTHVTHHPLSDHEATLRCWALGFYPAEITLTWQRDGED FT QTQDTELVETRPAGDGTFQKWAAVVVPSGQEQRYTCHMQHEGLQEPLTLSW" FT gap 271..370 FT /estimated_length=unknown FT gap 647..746 FT /estimated_length=unknown XX SQ Sequence 1022 BP; 169 A; 261 C; 283 G; 109 T; 200 other; gctcccactc catgaggtat ttcgacaccg ccgtgtcccg gcccggccgc ggagagcccc 60 gcttcatctc agtgggctac gtggacgaca cgcagttcgt gcggttcgac agcgacgccg 120 cgagtccgag aggggagccg cgggcgccgt gggtggagca ggaggggccg gagtattggg 180 accgggagac acagaagtac aagcgccagg cacaggctga ccgagtgaac ctgcggaaac 240 tgcgcggcta ctacaaccag agcgaggccg nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 300 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 360 nnnnnnnnnn ggtctcacac cctccagagg atgtctggct gcgacctggg gcccgacggg 420 cgcctcctcc gcgggtatga ccagtccgcc tacgacggca aggattacat cgccctgaac 480 gaggacctgc gctcctggac cgccgcggac accgcggctc agatcaccca gcgcaagttg 540 gaggcggccc gtgcggcgga gcagctgaga gcctacctgg agggcacgtg cgtggagtgg 600 ctccgcagat acctggagaa cgggaaggag acgctgcagc gcgcagnnnn nnnnnnnnnn 660 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 720 nnnnnnnnnn nnnnnnnnnn nnnnnnaacc cccaaagaca cacgtgaccc accaccccct 780 ctctgaccat gaggccaccc tgaggtgctg ggccctgggc ttctaccctg cggagatcac 840 actgacctgg cagcgggatg gggaggacca gacccaggac accgagcttg tggagaccag 900 gccagcagga gatggaacct tccagaagtg ggcagctgtg gtggtgcctt ctggacaaga 960 gcagagatac acgtgccata tgcagcacga ggggctgcaa gagcccctca ccctgagctg 1020 gg 1022 //