Dbfetch
ID LC105699; SV 1; linear; genomic DNA; STD; HUM; 3348 BP. XX AC LC105699; XX DT 06-JUL-2018 (Rel. 137, Created) DT 06-JUL-2018 (Rel. 137, Last updated, Version 1) XX DE Homo sapiens HLA-C gene for HLA class I histocompatibility antigen C alpha DE chain precursor, complete cds, allele: HLA-C*03:313. XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RC DOI:10.1111/tan.12750 RX DOI; .1111/tan.12750. RX PUBMED; 26898108. RA Suzuki S., Sato T., Akatsuka H., Kimura M., Shiina T.; RT "Identification of a novel HLA-C allele, HLA-C*03:313, in a Japanese RT individual"; RL HLA. 87(3):186-187(2016). XX RN [2] RP 1-3348 RA Shiina T.; RT ; RL Submitted (17-DEC-2015) to the INSDC. RL Contact:Takashi Shiina Tokai University School of Medicine, Molecular Life RL Science; 143 Shimokasuya, Isehara, Kanagawa 259-1143, Japan XX DR MD5; 4368fe779ebf70401d8b8c3c17e2acc5. DR IMGT/HLA; HLA-C*03:313; HLA14467. XX FH Key Location/Qualifiers FH FT source 1..3348 FT /organism="Homo sapiens" FT /mol_type="genomic DNA" FT /db_xref="taxon:9606" FT gene 284..3177 FT /gene="HLA-C" FT CDS join(284..356,487..756,1002..1277,1865..2140,2262..2381, FT 2821..2853,2961..3008,3173..3177) FT /codon_start=1 FT /gene="HLA-C" FT /allele="HLA-C*03:313" FT /product="HLA class I histocompatibility antigen C alpha FT chain precursor" FT /db_xref="GOA:A0A2Z5QAA1" FT /db_xref="InterPro:IPR001039" FT /db_xref="InterPro:IPR003006" FT /db_xref="InterPro:IPR003597" FT /db_xref="InterPro:IPR007110" FT /db_xref="InterPro:IPR010579" FT /db_xref="InterPro:IPR011161" FT /db_xref="InterPro:IPR011162" FT /db_xref="InterPro:IPR013783" FT /db_xref="InterPro:IPR036179" FT /db_xref="InterPro:IPR037055" FT /db_xref="UniProtKB/TrEMBL:A0A2Z5QAA1" FT /protein_id="BAU79358.1" FT /translation="MRVMAPRTLILLLSGALALTETWAGSHSMRYFYTAVSRPGRGEPH FT FIAVGYVDDTQFVRFDSDAASPRGEPRAPWVEQEGPEYWDRETQKYKRQAQTDRVSLRN FT LRGYYNQSEAGSHIIQRMYGCDVGPDGRLLRGYDQYAYDGKDYIALNEDLRSWTAADTA FT AQITQRKWEAAREAEQLRAYLGGLCVEWLRRYLKNGKETLQRAEHPKTHVTHHPVSDHE FT ATLRCWALGFYPAEITLTWQWDGEDQTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRY FT TCHVQHEGLPEPLTLRWEPSSQPTIPIVGIVAGLAVLAVLAVLGAVVAVVMCRRKSSGG FT KGGSCSQAASSNSAQGSDESLIACKA" XX SQ Sequence 3348 BP; 622 A; 972 C; 1051 G; 703 T; 0 other; aatcaggacg aagtcccagg tcccgggcgg ggctctcagg gtctcaggct ccaagggccg 60 tgtctgcact ggggaggcgc cgcgttgagg attctccact cccctgagtt tcacttcttc 120 tcccaacctg cgtcgggtcc ttcttcctga atactcatga cgcgtcccca attcccactc 180 ccattgggtg tcggattcta gagaagccaa tcagcgtctc cgcagtcccg gttctgaagt 240 ccccagtcac ccacccggac tcagattctc cccagacgcc gagatgcggg tcatggcgcc 300 ccgaaccctc atcctgctgc tctcgggagc cctggccctg accgagacct gggccggtga 360 gtgcggggtt gggagggaat cggcctctgc ggagaggagc gaggggcccg cccggcgagg 420 gcgcaggacc cggggagccg cgcagggagg agggtcgggc gggtctcagc ccctcctcgc 480 ccccaggctc ccactccatg aggtatttct acaccgctgt gtcccggccc ggccgcgggg 540 agccccactt catcgcagtg ggctacgtgg acgacacgca gttcgtgcgg ttcgacagcg 600 acgccgcgag tccgagaggg gagccgcggg cgccgtgggt ggagcaggag gggccggagt 660 attgggaccg ggagacacag aagtacaagc gccaggcaca gactgaccga gtgagcctgc 720 ggaacctgcg cggctactac aaccagagcg aggccggtga gtgaccccgg cccggggcgc 780 aggtcacgac ccctcctcat cccccacgga cggcccgggt cgccccaagt ctcccggtct 840 gagatccacc ccgaggctgc ggaacccgcc cagaccctcg accggagaga gccccagtca 900 cctttacccg gtttcatttt cagtttaggc caaaatcccc gcgggttggt cggggcgggg 960 cggggctcgg gggacggggc tgaccgcggg ggcggggcca gggtctcaca tcatccagag 1020 gatgtatggc tgcgacgtgg ggcccgacgg gcgcctcctc cgcgggtatg accagtacgc 1080 ctacgacggc aaggattaca tcgccctgaa cgaggatctg cgctcctgga ccgccgcgga 1140 cacggcggct cagatcaccc agcgcaagtg ggaggcggcc cgtgaggcgg agcagctgag 1200 agcctacctg gggggcctgt gcgtggagtg gctccgcaga tacctgaaga atgggaagga 1260 gacgctgcag cgcgcgggta ccaggggcag tggggagcct tccccatctc ctgtagatct 1320 cccgggatgg cctcccacga ggaggggagg aaaatgggat cagcgctaga atatcgccct 1380 cccttgaatg gagaatggga tgagttttcc tgagtttcct ctgagggccc cctctgctct 1440 ctaggacaat taagggatga agtccttgag gaaatggagg ggaagacagt ccctagaata 1500 ctgatcaggg gtcccctttg accactttga ccactgcagc agctgtggtc aggctgctga 1560 cctttctctc aggccttgtt ctctgcctca cgctcaatgt gtttgaaggt ttgattccag 1620 cttttctgag tccttcggcc tccactcagg tcaggaccag aagtcgctgt tcctccctca 1680 gagactagaa ctttccaatg aataggagat tatcccaggt gcctgtgtcc aggctggcgt 1740 ctgggttctg tgcccccttc cccaccccag gtgtcctgtc cgttctcagg atggtcacat 1800 gggcgctgtt ggagtgtcgc aagagagata caaagtgtct gaattttctg actcttcccg 1860 tcagaacacc caaagacaca cgtgacccac catcccgtct ctgaccatga ggccaccctg 1920 aggtgctggg ccctgggctt ctaccctgcg gagatcacac tgacctggca gtgggatggg 1980 gaggaccaaa ctcaggacac tgagcttgtg gagaccaggc cagcaggaga tggaaccttc 2040 cagaagtggg cagctgtggt ggtgccttct ggagaagagc agagatacac gtgccatgtg 2100 cagcacgagg ggctgccgga gcccctcacc ctgagatggg gtaaggaggg ggatgagggg 2160 tgatgtgtct tctcagggaa agcagaagtc ctggagccct tcagccaggt cagggctgag 2220 gcttgggggt cagggcccct caccttcccc tcctttccca gagccgtctt cccagcccac 2280 catccccatc gtgggcatcg ttgctggcct ggctgtcctg gctgtcctag ctgtcctagg 2340 agctgtggtg gctgttgtga tgtgtaggag gaagagctca ggtagggaag gggtgaggag 2400 tggggtctgg gttttcttgt tccactggga gtttcaagcc ccaggtagaa gtgtgcccca 2460 cctcgttact ggaagcacca tccacacatg ggccatccca gcctgggacc ctgtgtgcca 2520 gcacttactc tgttgtgaag cacatgacaa tgaaggacag atgtatcacc ttgatgatta 2580 tggtgttggg gtccttgatt ccagcattca tgagtcaggg gaaggtccct gctaaggaca 2640 gaccttagga gggcagttgc tccagaaccc acagctgctt tccccgtgtt tcctgatcct 2700 gccctgggtc tgcagtcata gttctggaaa cttctcttgg gtccaagact aggaggttcc 2760 cctaagatcg catggccctg actcctccct gtcccctcac agggcatttt cttcccacag 2820 gtggaaaagg agggagctgc tctcaggctg cgtgtaagtg atggcggtgg gcgtgtggag 2880 gagctcaccc accccataat tcctcttgtc ccacatctcc tgcgggctct gaccaggtct 2940 ttttttttgt tctaccccag ccagcaacag tgcccagggc tctgatgagt ctctcatcgc 3000 ttgtaaaggt gagattctgg ggagctgaag tggtcggggg tggggcagag ggaaaaggcc 3060 taggtaatgg ggatcctttg attgggacgt ttcgaatgtg tggtgagctg ttcagagtgt 3120 gatcacttac catgactgac ctgaatttgt tcatgactat tgtgttctgt agcctgagac 3180 agctgcctgt gtgggactga gatgcaggat ttcttcacac ctctcctttg tgacttcaag 3240 agcctctggc atctctttct gcaaaggcat ctgaatgtgt ctgcgttcct gttagcataa 3300 tgtgaggagg tggagagaca gcccaccccc gtgtccaccg tgacccct 3348 //