Dbfetch
ID L34096; SV 1; linear; mRNA; STD; HUM; 690 BP. XX AC L34096; XX DT 17-JAN-1995 (Rel. 42, Created) DT 17-JUN-2008 (Rel. 96, Last updated, Version 9) XX DE Human (clones 3, 4) MHC class II HLA-DQB1*0301 mRNA, 3' end. XX KW cell surface glycoprotein; class II gene; integral membrane protein; KW major histocompatibility complex. XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-690 RX DOI; 10.1111/j.1399-0039.1996.tb02512.x. RX PUBMED; 8929711. RA Yasunaga S., Kimura A., Hamaguchi K., Ronningen K.S., Sasazuki T.; RT "Different contribution of HLA-DR and -DQ genes in susceptibility and RT resistance to insulin-dependent diabetes mellitus (IDDM)"; RL Tissue Antigens 47(1):37-48(1996). XX DR MD5; 226dc8f9812ee7f7ad4a6b8b2b1cef3d. DR Ensembl-Gn; ENSG00000225824; homo_sapiens. DR Ensembl-Gn; ENSG00000231286; homo_sapiens. DR Ensembl-Gn; ENSG00000233209; homo_sapiens. DR Ensembl-Tr; ENST00000399088; homo_sapiens. DR Ensembl-Tr; ENST00000413089; homo_sapiens. DR Ensembl-Tr; ENST00000416192; homo_sapiens. DR Ensembl-Tr; ENST00000419914; homo_sapiens. DR Ensembl-Tr; ENST00000422950; homo_sapiens. DR Ensembl-Tr; ENST00000424806; homo_sapiens. DR IMGT/HLA; HLA-DQB1*03:01:01:01; HLA00625. XX FH Key Location/Qualifiers FH FT source 1..690 FT /organism="Homo sapiens" FT /map="6p21.3" FT /mol_type="mRNA" FT /cell_line="AMALA" FT /cell_type="B lymphoblastoid" FT /db_xref="taxon:9606" FT gene 1..690 FT /gene="HLA-DQB1" FT exon <1..13 FT /gene="HLA-DQB1" FT /number=1 FT /note="allele DQB1*0301; G00-120-517" FT CDS <1..690 FT /codon_start=1 FT /gene="HLA-DQB1" FT /product="MHC class II HLA-DQ-beta-1" FT /function="immune regulation" FT /note="allele DQB1*0301; putative" FT /db_xref="GOA:P01920" FT /db_xref="H-InvDB:HIT000193141.4" FT /db_xref="HGNC:HGNC:4944" FT /db_xref="InterPro:IPR000353" FT /db_xref="InterPro:IPR003006" FT /db_xref="InterPro:IPR003597" FT /db_xref="InterPro:IPR007110" FT /db_xref="InterPro:IPR011162" FT /db_xref="InterPro:IPR013783" FT /db_xref="InterPro:IPR014745" FT /db_xref="InterPro:IPR036179" FT /db_xref="PDB:1JK8" FT /db_xref="PDB:1NBN" FT /db_xref="PDB:1S9V" FT /db_xref="PDB:1UVQ" FT /db_xref="PDB:2NNA" FT /db_xref="PDB:4GG6" FT /db_xref="PDB:4OZF" FT /db_xref="PDB:4OZG" FT /db_xref="PDB:4OZH" FT /db_xref="PDB:4OZI" FT /db_xref="UniProtKB/Swiss-Prot:P01920" FT /protein_id="AAC41964.1" FT /translation="RDSPEDFVYQFKAMCYFTNGTERVRYVTRYIYNREEYARFDSDVE FT VYRAVTPLGPPDAEYWNSQKEVLERTRAELDTVCRHNYQLELRTTLQRRVEPTVTISPS FT RTEALNHHNLLVCSVTDFYPAQIKVRWFRNDQEETTGVVSTPLIRNGDWTFQILVMLEM FT TPQHGDVYTCHVEHPSLQNPITVEWRAQSESAQSKMLSGIGGFVLGLIFLGLGLIIHHR FT SQKGLLH" FT exon 14..283 FT /gene="HLA-DQB1" FT /number=2 FT /note="allele DQB1*0301; G00-120-517" FT exon 284..565 FT /gene="HLA-DQB1" FT /number=3 FT /note="allele DQB1*0301; G00-120-517" FT exon 566..676 FT /gene="HLA-DQB1" FT /number=4 FT /note="allele DQB1*0301; G00-120-517" FT exon 677..>690 FT /gene="HLA-DQB1" FT /number=6 FT /note="allele DQB1*0301; G00-120-517" XX SQ Sequence 690 BP; 155 A; 202 C; 204 G; 129 T; 0 other; agagactctc ccgaggattt cgtgtaccag tttaaggcca tgtgctactt caccaacggg 60 acggagcgcg tgcgttatgt gaccagatac atctataacc gagaggagta cgcacgcttc 120 gacagcgacg tggaggtgta ccgggcggtg acgccgctgg ggccgcctga cgccgagtac 180 tggaacagcc agaaggaagt cctggagagg acccgggcgg agttggacac ggtgtgcaga 240 cacaactacc agttggagct ccgcacgacc ttgcagcggc gagtggagcc cacagtgacc 300 atctccccat ccaggacaga ggccctcaac caccacaacc tgctggtctg ctcagtgaca 360 gatttctatc cagcccagat caaagtccgg tggtttcgga atgaccagga ggagacaacc 420 ggcgttgtgt ccacccccct tattaggaac ggtgactgga ccttccagat cctggtgatg 480 ctggaaatga ctccccagca tggagacgtc tacacctgcc acgtggagca ccccagcctc 540 cagaacccca tcaccgtgga gtggcgggct cagtctgaat ctgcccagag caagatgctg 600 agtggcattg gaggcttcgt gctggggctc atcttcctcg ggctgggcct tattatccat 660 cacaggagtc agaaagggct cctgcactga 690 //