Dbfetch

ID   KY499648; SV 1; linear; genomic DNA; STD; HUM; 3012 BP.
XX
AC   KY499648;
XX
DT   17-JAN-2018 (Rel. 135, Created)
DT   17-JAN-2018 (Rel. 135, Last updated, Version 1)
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DE   Homo sapiens MHC class I antigen (HLA-C) gene, HLA-C*03 allele, partial
DE   sequence.
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KW   .
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OS   Homo sapiens (human)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae;
OC   Homo.
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RN   [1]
RP   1-3012
RA   Balz V., Krause S., Enczmann J., Fischer J.;
RT   "More than 130 novel variants of HLA class 1 genes detected in German Stem
RT   Cell Donor Registry and Terasaki samples";
RL   Unpublished.
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RN   [2]
RP   1-3012
RA   Balz V., Krause S., Enczmann J., Fischer J.;
RT   ;
RL   Submitted (25-JAN-2017) to the INSDC.
RL   University Hospital Duesseldorf, Institute for Transplantation Diagnostics
RL   and Cell Therapeutics, Medical Faculty, Moorenstr. 5, Duesseldorf, NRW
RL   40225, Germany
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DR   MD5; 1d94258d008a06fa2431b566de5014c0.
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CC   ##Assembly-Data-START##
CC   Assembly Method       :: NGSEngine v. 2.4.0
CC   Sequencing Technology :: Illumina
CC   ##Assembly-Data-END##
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FH   Key             Location/Qualifiers
FH
FT   source          1..3012
FT                   /organism="Homo sapiens"
FT                   /chromosome="6"
FT                   /map="6p21"
FT                   /mol_type="genomic DNA"
FT                   /db_xref="taxon:9606"
FT   gene            1..>3012
FT                   /gene="HLA-C"
FT                   /allele="HLA-C*03"
FT                   /note="MHC class I antigen"
FT   variation       1712^1713
FT                   /gene="HLA-C"
FT                   /replace="tgaggccaccc"
FT                   /note="compared to HLA-C*03:04:01:01; deletion results in
FT                   frameshift"
XX
SQ   Sequence 3012 BP; 566 A; 862 C; 963 G; 621 T; 0 other;
     ttctagagaa gccaatcagc gtctccgcag tcccggttct gaagtcccca gtcacccacc        60
     cggactcaga ttctccccag acgccgagat gcgggtcatg gcgccccgaa ccctcatcct       120
     gctgctctcg ggagccctgg ccctgaccga gacctgggcc ggtgagtgcg gggttgggag       180
     ggaatcggcc tctgcggaga ggagcgaggg gcccgcccgg cgagggcgca ggacccgggg       240
     agccgcgcag ggaggagggt cgggcgggtc tcagcccctc ctcgccccca ggctcccact       300
     ccatgaggta tttctacacc gctgtgtccc ggcccggccg cggggagccc cacttcatcg       360
     cagtgggcta cgtggacgac acgcagttcg tgcggttcga cagcgacgcc gcgagtccga       420
     gaggggagcc gcgggcgccg tgggtggagc aggaggggcc ggagtattgg gaccgggaga       480
     cacagaagta caagcgccag gcacagactg accgagtgag cctgcggaac ctgcgcggct       540
     actacaacca gagcgaggcc ggtgagtgac cccggcccgg ggcgcaggtc acgacccctc       600
     ctcatccccc acggacggcc cgggtcgccc caagtctccc ggtctgagat ccaccccgag       660
     gctgcggaac ccgcccagac cctcgaccgg agagagcccc agtcaccttt acccggtttc       720
     attttcagtt taggccaaaa tccccgcggg ttggtcgggg cggggcgggg ctcgggggac       780
     ggggctgacc gcgggggcgg ggccagggtc tcacatcatc cagaggatgt atggctgcga       840
     cgtggggccc gacgggcgcc tcctccgcgg gtatgaccag tacgcctacg acggcaagga       900
     ttacatcgcc ctgaacgagg atctgcgctc ctggaccgcc gcggacacgg cggctcagat       960
     cacccagcgc aagtgggagg cggcccgtga ggcggagcag ctgagagcct acctggaggg      1020
     cctgtgcgtg gagtggctcc gcagatacct gaagaatggg aaggagacgc tgcagcgcgc      1080
     gggtaccagg ggcagtgggg agccttcccc atctcctgta gatctcccgg gatggcctcc      1140
     cacgaggagg ggaggaaaat gggatcagcg ctagaatatc gccctccctt gaatggagaa      1200
     tgggatgagt tttcctgagt ttcctctgag ggccccctct gctctctagg acaattaagg      1260
     gatgaagtcc ttgaggaaat ggaggggaag acagtcccta gaatactgat caggggtccc      1320
     ctttgaccac tttgaccact gcagcagctg tggtcaggct gctgaccttt ctctcaggcc      1380
     ttgttctctg cctcacgctc aatgtgtttg aaggtttgat tccagctttt ctgagtcctt      1440
     cggcctccac tcaggtcagg accagaagtc gctgttcctc cctcagagac tagaactttc      1500
     caatgaatag gagattatcc caggtgcctg tgtccaggct ggcgtctggg ttctgtgccc      1560
     ccttccccac cccaggtgtc ctgtccgttc tcaggatggt cacatgggcg ctgttggagt      1620
     gtcgcaagag agatacaaag tgtctgaatt ttctgactct tcccgtcaga acacccaaag      1680
     acacacgtga cccaccatcc cgtctctgac catgaggtgc tgggccctgg gcttctaccc      1740
     tgcggagatc acactgacct ggcagtggga tggggaggac caaactcagg acactgagct      1800
     tgtggagacc aggccagcag gagatggaac cttccagaag tgggcagctg tggtggtgcc      1860
     ttctggagaa gagcagagat acacgtgcca tgtgcagcac gaggggctgc cggagcccct      1920
     caccctgaga tggggtaagg agggggatga ggggtgatgt gtcttctcag ggaaagcaga      1980
     agtcctggag cccttcagcc aggtcagggc tgaggcttgg gggtcagggc ccctcacctt      2040
     cccctccttt cccagagccg tcttcccagc ccaccatccc catcgtgggc atcgttgctg      2100
     gcctggctgt cctggctgtc ctagctgtcc taggagctgt ggtggctgtt gtgatgtgta      2160
     ggaggaagag ctcaggtagg gaaggggtga ggagtggggt ctgggttttc ttgttccact      2220
     gggagtttca agccccaggt agaagtgtgc cccacctcgt tactggaagc accatccaca      2280
     catgggccat cccagcctgg gaccctgtgt gccagcactt actctgttgt gaagcacatg      2340
     acaatgaagg acagatgtat caccttgatg attatggtgt tggggtcctt gattccagca      2400
     ttcatgagtc aggggaaggt ccctgctaag gacagacctt aggagggcag ttgctccaga      2460
     acccacagct gctttccccg tgtttcctga tcctgccctg ggtctgcagt catagttctg      2520
     gaaacttctc ttgggtccaa gactaggagg ttcccctaag atcgcatggc cctgactcct      2580
     ccctgtcccc tcacagggca ttttcttccc acaggtggaa aaggagggag ctgctctcag      2640
     gctgcgtgta agtgatggcg gtgggcgtgt ggaggagctc acccacccca taattcctct      2700
     tgtcccacat ctcctgcggg ctctgaccag gtcttttttt ttgttctacc ccagccagca      2760
     acagtgccca gggctctgat gagtctctca tcgcttgtaa aggtgagatt ctggggagct      2820
     gaagtggtcg ggggtggggc agagggaaaa ggcctaggta atggggatcc tttgattggg      2880
     acgtttcgaa tgtgtggtga gctgttcaga gtgtgatcac ttaccatgac tgacctgaat      2940
     ttgttcatga ctattgtgtt ctgtagcctg agacagctgc ctgtgtggga ctgagatgca      3000
     ggatttcttc ac                                                          3012
//