Dbfetch
ID KY419497; SV 1; linear; genomic DNA; STD; HUM; 3044 BP. XX AC KY419497; XX DT 26-AUG-2017 (Rel. 133, Created) DT 26-AUG-2017 (Rel. 133, Last updated, Version 1) XX DE Homo sapiens MHC class I antigen (HLA-B) gene, HLA-B*51:01:01New4 allele, DE complete cds. XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-3044 RA Balz V., Krause S., Enczmann J., Fischer J.; RT "More than 130 novel variants of HLA class 1 genes detected in German Stem RT Cell Donor Registry and Terasaki samples"; RL Unpublished. XX RN [2] RP 1-3044 RA Balz V., Krause S., Enczmann J., Fischer J.; RT ; RL Submitted (02-JAN-2017) to the INSDC. RL University Hospital Duesseldorf, Institute for Transplantation Diagnostics RL and Cell Therapeutics, Medical Faculty, Moorenstr. 5, Duesseldorf, NRW RL 40225, Germany XX DR MD5; ded709b463eaa0dcd728c735b8531b1a. DR IMGT/HLA; HLA-B*51:01:01:17; HLA16691. XX CC ##Assembly-Data-START## CC Assembly Method :: NGSengine v. 2.4.0 CC Sequencing Technology :: Illumina CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..3044 FT /organism="Homo sapiens" FT /chromosome="6" FT /map="6p21.3" FT /mol_type="genomic DNA" FT /db_xref="taxon:9606" FT gene <1..>3044 FT /gene="HLA-B" FT /allele="HLA-B*51:01:01New4" FT mRNA join(<1..226,356..625,871..1146,1722..1997,2102..2218, FT 2660..2692,2799..>3044) FT /gene="HLA-B" FT /allele="HLA-B*51:01:01New4" FT /product="MHC class I antigen" FT exon <1..226 FT /gene="HLA-B" FT /allele="HLA-B*51:01:01New4" FT /number=1 FT 5'UTR <1..153 FT /gene="HLA-B" FT /allele="HLA-B*51:01:01New4" FT CDS join(154..226,356..625,871..1146,1722..1997,2102..2218, FT 2660..2692,2799..2842) FT /codon_start=1 FT /gene="HLA-B" FT /allele="HLA-B*51:01:01New4" FT /product="MHC class I antigen" FT /db_xref="GOA:Q546B1" FT /db_xref="InterPro:IPR001039" FT /db_xref="InterPro:IPR003006" FT /db_xref="InterPro:IPR003597" FT /db_xref="InterPro:IPR007110" FT /db_xref="InterPro:IPR010579" FT /db_xref="InterPro:IPR011161" FT /db_xref="InterPro:IPR011162" FT /db_xref="InterPro:IPR013783" FT /db_xref="InterPro:IPR036179" FT /db_xref="InterPro:IPR037055" FT /db_xref="UniProtKB/TrEMBL:Q546B1" FT /protein_id="ASU50388.1" FT /translation="MRVTAPRTVLLLLWGAVALTETWAGSHSMRYFYTAMSRPGRGEPR FT FIAVGYVDDTQFVRFDSDAASPRTEPRAPWIEQEGPEYWDRNTQIFKTNTQTYRENLRI FT ALRYYNQSEAGSHTWQTMYGCDVGPDGRLLRGHNQYAYDGKDYIALNEDLSSWTAADTA FT AQITQRKWEAAREAEQLRAYLEGLCVEWLRRHLENGKETLQRADPPKTHVTHHPVSDHE FT ATLRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDRTFQKWAAVVVPSGEEQRY FT TCHVQHEGLPKPLTLRWEPSSQSTIPIVGIVAGLAVLAVVVIGAVVATVMCRRKSSGGK FT GGSYSQAASSDSAQGSDVSLTA" FT exon 356..625 FT /gene="HLA-B" FT /allele="HLA-B*51:01:01New4" FT /number=2 FT exon 871..1146 FT /gene="HLA-B" FT /allele="HLA-B*51:01:01New4" FT /number=3 FT exon 1722..1997 FT /gene="HLA-B" FT /allele="HLA-B*51:01:01New4" FT /number=4 FT exon 2102..2218 FT /gene="HLA-B" FT /allele="HLA-B*51:01:01New4" FT /number=5 FT exon 2660..2692 FT /gene="HLA-B" FT /allele="HLA-B*51:01:01New4" FT /number=6 FT exon 2799..>3044 FT /gene="HLA-B" FT /allele="HLA-B*51:01:01New4" FT /number=7 FT 3'UTR 2843..>3044 FT /gene="HLA-B" FT /allele="HLA-B*51:01:01New4" XX SQ Sequence 3044 BP; 572 A; 879 C; 966 G; 627 T; 0 other; gtcgggtcct tcttccagga tactcgtgac gcgtccccat ttcccactcc cattgggtgt 60 cggatatcta gagaagccaa tcagtgtcgc cggggtccca gttctaaagt ccccacgcac 120 ccacccggac tcagaatctc ctcagacgcc gagatgcggg tcacggcgcc ccgaaccgtc 180 ctcctgctgc tctggggggc agtggccctg accgagacct gggccggtga gtgcggggtc 240 gggagggaaa tggcctctgt ggggaggagc gaggggaccg caggcggggg cgcaggacct 300 gaggagccgc gccgggagga gggtcgggcg ggtctcagcc cctcctcgcc cccaggctcc 360 cactccatga ggtatttcta caccgccatg tcccggcccg gccgcgggga gccccgcttc 420 attgcagtgg gctacgtgga cgacacccag ttcgtgaggt tcgacagcga cgccgcgagt 480 ccgaggacgg agccccgggc gccatggata gagcaggagg ggccggagta ttgggaccgg 540 aacacacaga tcttcaagac caacacacag acttaccgag agaacctgcg gatcgcgctc 600 cgctactaca accagagcga ggccggtgag tgaccccggc ccggggcgca ggtcacgact 660 ccccatcccc cacgtacggc ccgggtcgcc ccgagtctcc gggtccgaga tccgcctccc 720 tgaggccgcg ggacccgccc agaccctcga ccggcgagag ccccaggcgc gtttacccgg 780 tttcattttc agttgaggcc aaaatccccg cgggttggtc ggggcggggc ggggctcggg 840 ggacggtgct gaccgcgggg ccggggccag ggtctcacac ttggcagacg atgtatggct 900 gcgacgtggg gccggacggg cgcctcctcc gcgggcataa ccagtacgcc tacgacggca 960 aagattacat cgccctgaac gaggacctga gctcctggac cgcggcggac accgcggctc 1020 agatcaccca gcgcaagtgg gaggcggccc gtgaggcgga gcagctgaga gcctacctgg 1080 agggcctgtg cgtggagtgg ctccgcagac acctggagaa cgggaaggag acgctgcagc 1140 gcgcgggtac caggggcagt ggggagcctt ccccatctcc tataggtcgc tggggatggc 1200 ctcccacgag aagaggagga aaatgggatc agcgctagaa tgtcgccctc ccttgaatgg 1260 agaatggcat gagttttcct gagtttcctc tgagggcccc ctcttctctc taggacaatt 1320 aagggatgac gtctctgagg aaatggaggg gaagacagtc cctagaatac tgatcagggg 1380 tcccctttga cccctgcagc agccttggga accgtgactt ttcctctcag gccttgttct 1440 ctgcctcaca ctcagtgtgt ttggggctct gattccagca cttctgagtc actttacctc 1500 cactcagatc aggagcagaa gtccctgttc cccgctcaga gactcgaact ttccaatgaa 1560 taggagatta tcccaggtgc ctgcgtccag gctggtgtct gggttctgtg ccccttcccc 1620 acaccaggtg tcctgtccat tctcaggctg gtcacatggg tggtcctagg gtgtcccatg 1680 agagatgcaa agcgcctgaa ttttctgact cttcccatca gaccccccaa agacacacgt 1740 gacccaccac cccgtctctg accatgaggc caccctgagg tgctgggccc tgggcttcta 1800 ccctgcggag atcacactga cctggcagcg ggatggcgag gaccaaactc aggacactga 1860 gcttgtggag accagaccag caggagatag aaccttccag aagtgggcag ctgtggtggt 1920 gccttctgga gaagagcaga gatacacatg ccatgtacag catgaggggc tgccgaagcc 1980 cctcaccctg agatggggta aggaggggga tgaggggtca tatctcttct cagggaaagc 2040 aggagccctt ctggagccct tcagcagggt cagggcccct cgtcttcccc tcctttccca 2100 gagccatctt cccagtccac catccccatc gtgggcattg ttgctggcct ggctgtccta 2160 gcagttgtgg tcatcggagc tgtggtcgct actgtgatgt gtaggaggaa gagctcaggt 2220 agggaagggg tgaggggtgg ggtctgggtt ttcttgtccc actgggggtt tcaagcccca 2280 ggtagaagtg ttccctgcct cattactggg aagcagcatc cacacagggg ctaacgcagc 2340 ctgggaccct gtgtgccagc acttactctt ttgtgcagca catgtgacaa tgaaggacgg 2400 atgtatcacc ttgatggttg tggtgttggg gtcctgattt cagcattcat gagtcagggg 2460 aaggtccctg ctaaggacag accttaggag ggcagttggt ccaggaccca cacttgcttt 2520 cctcgtgttt cctgatcctg ccttgggtct gtagtcatac ttctggaaat tccttttggg 2580 tccaagacga ggaggttcct ctaagatctc atggccctgc ttcctcccag tcccctcaca 2640 ggacattttc ttcccacagg tggaaaagga gggagctact ctcaggctgc gtgtaagtgg 2700 tgggggtggg agtgtggagg agctcaccca ccccataatt cctcctgtcc cacgtctcct 2760 gcgggctctg accaggtcct gtttttgttc tactccagcc agcgacagtg cccagggctc 2820 tgatgtgtct ctcacagctt gaaaaggtga gattcttggg gtctagagtg ggcggggggg 2880 gcggggaggg ggcagagggg aaaggcctgg gtaatggaga ttctttgatt gggatgtttc 2940 gcgtgtgtcg tgggctgttc agagtgtcat cacttaccat gactaaccag aatttgttca 3000 tgactgttgt tttctgtagc ctgagacagc tgtcttgtga ggga 3044 //