Dbfetch
ID KY419486; SV 1; linear; genomic DNA; STD; HUM; 3041 BP. XX AC KY419486; XX DT 26-AUG-2017 (Rel. 133, Created) DT 26-AUG-2017 (Rel. 133, Last updated, Version 1) XX DE Homo sapiens MHC class I antigen (HLA-B) gene, HLA-B*40:02:01New allele, DE complete cds. XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-3041 RA Balz V., Krause S., Enczmann J., Fischer J.; RT "More than 130 novel variants of HLA class 1 genes detected in German Stem RT Cell Donor Registry and Terasaki samples"; RL Unpublished. XX RN [2] RP 1-3041 RA Balz V., Krause S., Enczmann J., Fischer J.; RT ; RL Submitted (02-JAN-2017) to the INSDC. RL University Hospital Duesseldorf, Institute for Transplantation Diagnostics RL and Cell Therapeutics, Medical Faculty, Moorenstr. 5, Duesseldorf, NRW RL 40225, Germany XX DR MD5; c2953e783cbd4d91cc8f273087a1d65e. XX CC ##Assembly-Data-START## CC Assembly Method :: NGSengine v. 2.4.0 CC Sequencing Technology :: Illumina CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..3041 FT /organism="Homo sapiens" FT /chromosome="6" FT /map="6p21.3" FT /mol_type="genomic DNA" FT /db_xref="taxon:9606" FT gene <1..>3041 FT /gene="HLA-B" FT /allele="HLA-B*40:02:01New" FT mRNA join(<1..226,356..625,870..1145,1721..1996,2090..2206, FT 2648..2680,2787..>3041) FT /gene="HLA-B" FT /allele="HLA-B*40:02:01New" FT /product="MHC class I antigen" FT exon <1..226 FT /gene="HLA-B" FT /allele="HLA-B*40:02:01New" FT /number=1 FT 5'UTR <1..153 FT /gene="HLA-B" FT /allele="HLA-B*40:02:01New" FT CDS join(154..226,356..625,870..1145,1721..1996,2090..2206, FT 2648..2680,2787..2830) FT /codon_start=1 FT /gene="HLA-B" FT /allele="HLA-B*40:02:01New" FT /product="MHC class I antigen" FT /db_xref="GOA:A0A173ADH9" FT /db_xref="InterPro:IPR001039" FT /db_xref="InterPro:IPR003006" FT /db_xref="InterPro:IPR003597" FT /db_xref="InterPro:IPR007110" FT /db_xref="InterPro:IPR010579" FT /db_xref="InterPro:IPR011161" FT /db_xref="InterPro:IPR011162" FT /db_xref="InterPro:IPR013783" FT /db_xref="InterPro:IPR036179" FT /db_xref="InterPro:IPR037055" FT /db_xref="UniProtKB/TrEMBL:A0A173ADH9" FT /protein_id="ASU50377.1" FT /translation="MRVTAPRTLLLLLWGAVALTETWAGSHSMRYFHTSVSRPGRGEPR FT FITVGYVDDTLFVRFDSDATSPRKEPRAPWIEQEGPEYWDRETQISKTNTQTYRESLRN FT LRGYYNQSEAGSHTLQSMYGCDVGPDGRLLRGHNQYAYDGKDYIALNEDLRSWTAADTA FT AQITQRKWEAARVAEQLRAYLEGECVEWLRRYLENGKETLQRADPPKTHVTHHPISDHE FT ATLRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDRTFQKWAAVVVPSGEEQRY FT TCHVQHEGLPKPLTLRWEPSSQSTVPIVGIVAGLAVLAVVVIGAVVAAVMCRRKSSGGK FT GGSYSQAACSDSAQGSDVSLTA" FT exon 356..625 FT /gene="HLA-B" FT /allele="HLA-B*40:02:01New" FT /number=2 FT exon 870..1145 FT /gene="HLA-B" FT /allele="HLA-B*40:02:01New" FT /number=3 FT exon 1721..1996 FT /gene="HLA-B" FT /allele="HLA-B*40:02:01New" FT /number=4 FT exon 2090..2206 FT /gene="HLA-B" FT /allele="HLA-B*40:02:01New" FT /number=5 FT exon 2648..2680 FT /gene="HLA-B" FT /allele="HLA-B*40:02:01New" FT /number=6 FT exon 2787..>3041 FT /gene="HLA-B" FT /allele="HLA-B*40:02:01New" FT /number=7 FT 3'UTR 2831..>3041 FT /gene="HLA-B" FT /allele="HLA-B*40:02:01New" XX SQ Sequence 3041 BP; 562 A; 879 C; 976 G; 624 T; 0 other; gtcgggtcct tcttccagga tactcgtgac gcgtccccat ttcccactcc cattgggtgt 60 cgggtgtcta gagaagccaa tcagtgtcgc cggggtccca gttctaaagt ccccacgcac 120 ccacccggac tcagaatctc ctcagacgcc gagatgcggg tcacggcgcc ccgaaccctc 180 ctcctgctgc tctggggggc agtggccctg accgagacct gggctggtga gtgcggggtc 240 ggcagggaaa tggcctctgt ggggaggagc gaggggaccg caggcggggg cgcaggaccc 300 ggggagccgc gccgggagga gggtcgggcg ggtctcagcc cctcctcgcc cccaggctcc 360 cactccatga ggtatttcca cacctccgtg tcccggcccg gccgcgggga gccccgcttc 420 atcaccgtgg gctacgtgga cgacacgctg ttcgtgaggt tcgacagcga cgccacgagt 480 ccgaggaagg agccgcgggc gccatggata gagcaggagg ggccggagta ttgggaccgg 540 gagacacaga tctccaagac caacacacag acttaccgag agagcctgcg gaacctgcgc 600 ggctactaca accagagcga ggccggtgag tgaccccggc ccggggcgca ggtcacgact 660 ccccatcccc cacgtacggc ccgggtcgcc ccgagtctcc gggtccgaga tccgcccccg 720 aggccgcggg acccgcccag accctcgacc ggcgagagcc ccaggcgcgt ttacccggtt 780 tcattttcag ttgaggccaa aatccccgcg ggttggtcgg ggcggggcgg ggcccggggg 840 gacggggctg accgcggggg cggggccagg gtctcacacc ctccagagca tgtacggctg 900 cgacgtgggg ccggacgggc gcctcctccg cgggcataac cagtacgcct acgacggcaa 960 ggattacatc gccctgaacg aggacctgcg ctcctggacc gccgcggaca cggcggctca 1020 gatcacccag cgcaagtggg aggcggcccg tgtggcggag cagctgagag cctacctgga 1080 gggcgagtgc gtggagtggc tccgcagata cctggagaac gggaaggaga cgctgcagcg 1140 cgcgggtacc aggggcagtg gggagccttc cccatctcct ataggtcgcc ggggatggcc 1200 tcccacgaga agaggaggaa aatgggatca gcgctagaat gtcgccctcc cttgaatgga 1260 gaatggcatg agttttcctg agtttcctct gagggccccc tcttctctct aggacaatta 1320 agggatgacg tctctgagga aatggagggg aagacagtcc ctagaatact gatcaggggt 1380 cccctttgac ccctgcagca gccttgggaa ccgtgacttt tcctctcagg ccttgttctc 1440 tgcctcacac tcagtgtgtt tggggctctg attccagcac ttctgagtca ctttacctcc 1500 actcagatca ggagcagaag tccctgttcc ccgctcagag actcgaactt tccaatgaat 1560 aggagattat cccaggtgcc tgcgtccagg ctggtgtctg ggttctgtgc cccttcccca 1620 ccccaggtgt cctgtccatt ctcaggctgg tcacatgggt ggtcctaggg tgtcccatga 1680 gagatgcaaa gcgcctgaat tttctgactc ttcccatcag accccccaaa gacacacgtg 1740 acccaccacc ccatctctga ccatgaggcc accctgaggt gctgggccct gggcttctac 1800 cctgcggaga tcacactgac ctggcagcgg gatggcgagg accaaactca ggacactgag 1860 cttgtggaga ccagaccagc aggagataga accttccaga agtgggcagc tgtggtggtg 1920 ccttctggag aagagcagag atacacatgc catgtacagc atgaggggct gccgaagccc 1980 ctcaccctga gatggggtaa ggagggggat gaggggtcat atctcttctc agggaaagca 2040 ggagcccttc agcagggtca gggcccctca tcttcccttc ctttcccaga gccgtcttcc 2100 cagtccaccg tccccatcgt gggcattgtt gctggcctgg ctgtcctagc agttgtggtc 2160 atcggagctg tggtcgctgc tgtgatgtgt aggaggaaga gctcaggtag ggaaggggtg 2220 aggggtgggg tctgagtttt cttgtcccac tgggggtttc aagccccagg tagaagtgtt 2280 ccctgcctca ttactgggaa gcagcatcca cacaggggct aacgcagcct gggaccctgt 2340 gtgccagaac ttactctttt gtgcagcaca tgtgacaatg aaggacggat gtatcacctt 2400 ggtggttgtg gtgttggggt cctgattcca gcattcatga gtcaggggaa ggtccctgct 2460 aaggacagac cttaggaggg cagttggtcc aggacccaca cttgctttcc tcgtgtttcc 2520 tgatcctgcc ttgggtctgt agtcatactt ctggaaattc cttttgggtc caagacgagg 2580 aggttcctct aagatctcat ggccctgctt cctcccagtc ccctcacagg gcattttctt 2640 cccacaggtg gaaaaggagg gagctactct caggctgcgt gtaagtgatg ggggtgggag 2700 tgtggaggag ctcacccacc ccctaattcc tcctgtccca cgtctcctgc gggctctgac 2760 caggtcctgt ttttgttcta ctccaggcag cgacagtgcc cagggctctg atgtgtctct 2820 cacagcttga aaaggtgaga ttcttggggt ctagagtggg tggggtggca ggtctggggg 2880 tgggtggggc agtggggaaa ggcctgggta atggagattc tttgattggg atgtttcgcg 2940 tgtgtggtgg gctgtttaga ctgtcatcac ttaccatgac taaccagaat ttgttcatga 3000 ctgttgtttt ctgtagcctg agacagctgt cttgtgaggg a 3041 //