Dbfetch
ID KY419466; SV 1; linear; genomic DNA; STD; HUM; 3053 BP. XX AC KY419466; XX DT 26-AUG-2017 (Rel. 133, Created) DT 26-AUG-2017 (Rel. 133, Last updated, Version 1) XX DE Homo sapiens MHC class I antigen (HLA-B) gene, HLA-B*15:01:01New4 allele, DE complete cds. XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-3053 RA Balz V., Krause S., Enczmann J., Fischer J.; RT "More than 130 novel variants of HLA class 1 genes detected in German Stem RT Cell Donor Registry and Terasaki samples"; RL Unpublished. XX RN [2] RP 1-3053 RA Balz V., Krause S., Enczmann J., Fischer J.; RT ; RL Submitted (02-JAN-2017) to the INSDC. RL University Hospital Duesseldorf, Institute for Transplantation Diagnostics RL and Cell Therapeutics, Medical Faculty, Moorenstr. 5, Duesseldorf, NRW RL 40225, Germany XX DR MD5; 1bb6e2d8791a446b19b7a1263462ff08. DR Ensembl-Gn; ENSG00000232126; homo_sapiens. DR Ensembl-Tr; ENST00000450871; homo_sapiens. DR IMGT/HLA; HLA-B*15:01:01:11; HLA16678. XX CC ##Assembly-Data-START## CC Assembly Method :: NGSengine v. 2.4.0 CC Sequencing Technology :: Illumina CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..3053 FT /organism="Homo sapiens" FT /chromosome="6" FT /map="6p21.3" FT /mol_type="genomic DNA" FT /db_xref="taxon:9606" FT gene <1..>3053 FT /gene="HLA-B" FT /allele="HLA-B*15:01:01New4" FT mRNA join(<1..226,356..625,871..1146,1722..1997,2102..2218, FT 2660..2692,2799..>3053) FT /gene="HLA-B" FT /allele="HLA-B*15:01:01New4" FT /product="MHC class I antigen" FT exon <1..226 FT /gene="HLA-B" FT /allele="HLA-B*15:01:01New4" FT /number=1 FT 5'UTR <1..153 FT /gene="HLA-B" FT /allele="HLA-B*15:01:01New4" FT CDS join(154..226,356..625,871..1146,1722..1997,2102..2218, FT 2660..2692,2799..2842) FT /codon_start=1 FT /gene="HLA-B" FT /allele="HLA-B*15:01:01New4" FT /product="MHC class I antigen" FT /db_xref="GOA:D9J307" FT /db_xref="InterPro:IPR001039" FT /db_xref="InterPro:IPR003006" FT /db_xref="InterPro:IPR003597" FT /db_xref="InterPro:IPR007110" FT /db_xref="InterPro:IPR010579" FT /db_xref="InterPro:IPR011161" FT /db_xref="InterPro:IPR011162" FT /db_xref="InterPro:IPR013783" FT /db_xref="InterPro:IPR036179" FT /db_xref="InterPro:IPR037055" FT /db_xref="UniProtKB/TrEMBL:D9J307" FT /protein_id="ASU50357.1" FT /translation="MRVTAPRTVLLLLSGALALTETWAGSHSMRYFYTAMSRPGRGEPR FT FIAVGYVDDTQFVRFDSDAASPRMAPRAPWIEQEGPEYWDRETQISKTNTQTYRESLRN FT LRGYYNQSEAGSHTLQRMYGCDVGPDGRLLRGHDQSAYDGKDYIALNEDLSSWTAADTA FT AQITQRKWEAAREAEQWRAYLEGLCVEWLRRYLENGKETLQRADPPKTHVTHHPISDHE FT ATLRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDRTFQKWAAVVVPSGEEQRY FT TCHVQHEGLPKPLTLRWEPSSQSTIPIVGIVAGLAVLAVVVIGAVVATVMCRRKSSGGK FT GGSYSQAASSDSAQGSDVSLTA" FT exon 356..625 FT /gene="HLA-B" FT /allele="HLA-B*15:01:01New4" FT /number=2 FT exon 871..1146 FT /gene="HLA-B" FT /allele="HLA-B*15:01:01New4" FT /number=3 FT exon 1722..1997 FT /gene="HLA-B" FT /allele="HLA-B*15:01:01New4" FT /number=4 FT exon 2102..2218 FT /gene="HLA-B" FT /allele="HLA-B*15:01:01New4" FT /number=5 FT exon 2660..2692 FT /gene="HLA-B" FT /allele="HLA-B*15:01:01New4" FT /number=6 FT exon 2799..>3053 FT /gene="HLA-B" FT /allele="HLA-B*15:01:01New4" FT /number=7 FT 3'UTR 2843..>3053 FT /gene="HLA-B" FT /allele="HLA-B*15:01:01New4" XX SQ Sequence 3053 BP; 565 A; 885 C; 975 G; 628 T; 0 other; gtcgggtcct tcttccagga tactcgtgac gcgtccccat ttcccactcc cattgggtgt 60 cgggtgtcta gagaagccaa tcagtgtcgc cggggtccca gttctaaagt ccccacgcac 120 ccacccggac tcaaaatctc ctcagacgcc gagatgcggg tcacggcgcc ccgaaccgtc 180 ctcctgctgc tctcgggagc cctggccctg accgagacct gggccggtga gtgcggggtc 240 ggcagggaaa tggcctctgt ggggaggagc gaggggaccg caggcggggg cgcaggaccc 300 ggggagccgc gcagggagga gggtcgggcg ggtctcagcc cctcctcgcc cccaggctcc 360 cactccatga ggtatttcta caccgccatg tcccggcccg gccgcgggga gccccgcttc 420 atcgcagtgg gctacgtgga cgacacccag ttcgtgaggt tcgacagcga cgccgcgagt 480 ccgaggatgg cgccccgggc gccatggata gagcaggagg ggccggagta ttgggaccgg 540 gagacacaga tctccaagac caacacacag acttaccgag agagcctgcg gaacctgcgc 600 ggctactaca accagagcga ggccggtgag tgaccccggc ctggggcgca ggtcacgact 660 ccccatcccc cacgtacggc ccgggtcgcc ccgagtctcc gggtccgaga tccgcccccc 720 tgaggccgcg ggacccgccc aaaccctcga ccggcgagag ccccaggcgc gtttacccgg 780 tttcattttc agttgaggcc aaaatccccg cgggttggtc ggggcggggc ggggctcggg 840 ggacggggct gaccgcgggg ccggggccag ggtctcacac cctccagagg atgtacggct 900 gcgacgtggg gccggacggg cgcctcctcc gcgggcatga ccagtccgcc tacgacggca 960 aggattacat cgccctgaac gaggacctga gctcctggac cgcggcggac acggcggctc 1020 agatcaccca gcgcaagtgg gaggcggccc gtgaggcgga gcagtggaga gcctacctgg 1080 agggcctgtg cgtggagtgg ctccgcagat acctggagaa cgggaaggag acgctgcagc 1140 gcgcgggtac caggggcagt ggggagcctt ccccatctcc tataggtcgc cggggatggc 1200 ctcccacgag aagaggagga aaatgggatc agcgctagaa tgtcgccctc ccttgaatgg 1260 agaatggcat gagttttcct gagtttcctc tgagggcccc ctcttctctc taggacaatt 1320 aagggatgac gtctctgagg aaatggaggg gaagacagtc cctaggatag tgatcagggg 1380 tcccctttga cccctgcagc agccttggga accgtgactt ttcctctcag gccttgttct 1440 ctgcctcaca ctcagtgtgt ttggggctct gattccagca cttctgagtc actttacctc 1500 cactcagatc aggagcagaa gtccctgttc cccgctcaga gactcgaact ttccaatgaa 1560 taggagatta tcccaggtgc ctgcgtccag gctggtgtct gggttctgtg ccccttcccc 1620 accccaggtg tcctgtccat tctcaggctg gtcacatggg tggtcctagg gtgtcccatg 1680 agagatgcaa agcgcctgaa ttttctgact cttcccatca gaccccccaa agacacatgt 1740 gacccaccac cccatctctg accatgaggc caccctgagg tgctgggccc tgggcttcta 1800 ccctgcggag atcacactga cctggcagcg ggatggcgag gaccaaactc aggacaccga 1860 gcttgtggag accagaccag caggagatag aaccttccag aagtgggcag ctgtggtggt 1920 gccttctgga gaagagcaga gatacacatg ccatgtacag catgaggggc tgccgaagcc 1980 cctcaccctg agatggggta aggaggggga tgaggggtca tatctgttct cagggaaagc 2040 aggagccctt ctggagccct tcagcagggt cagggcccct catcttcccc tcctttccca 2100 gagccatctt cccagtccac catccccatc gtgggcattg ttgctggcct ggctgtccta 2160 gcagttgtgg tcatcggagc tgtggtcgct actgtgatgt gtaggaggaa gagctcaggt 2220 agggaagggg tgaggggtgg ggtctgggtt ttcttgtccc actgggggtt tcaagcccca 2280 ggtagaagtg ttccctgcct cattactggg aagcagcatc cacacagggg ctaacgcagc 2340 ctgggaccct gtgtgccagc acttactctt ttgtgcagca catgtgacaa tgaaggacag 2400 atgtatcgcc ttgatggttg tggtgttggg gtcctgattc cagcattcat gagtcagggg 2460 aaggtccctg ctaaggacag accttaggag ggcagttggt ccaggaccca cacttgcttt 2520 cctcgtgttt cctgatcctg ccctgggtct gtagtcatac ttctggaaat tccttttggt 2580 tccaagacga ggaggttcct ctaagatctc atggtcctgc ttcctcccag tcccctcaca 2640 ggacattttc ttcccacagg tggaaaagga gggagctact ctcaggctgc gtgtaagtgg 2700 tgggggtggg agtgtggagg agctcaccca ccccataatt cctcctgtcc cacgtctcct 2760 gcgggctctg accaggtcct gtttttgttc tactccagcc agcgacagtg cccagggctc 2820 tgatgtgtct ctcacagctt gaaaaggtga gattcttggg gtctagagtg ggtggggtgg 2880 cgggtctggg ggtgggtggg gcagtgggga aaggcctggg taatggagat tctttgattg 2940 ggatgtttcg cgtgtgtcgt gggctgttca gagtgtcatc acttaccatg actaaccaga 3000 atttgttcat gactgttgtt ttctgtagcc tgagacagct gtcttgtgag gga 3053 //